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Oryza sativa
cluster # 6821 cluster # 6821       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6821#0 length = 730 sequences # 4  

consensusID : consensus_6821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 730
fasta sequence
                              [AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATGATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACACAGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTGGCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGATGGCGGAGGA]

[+] EMBL CB651732             [AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATGATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACACAGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAG  AAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTGGCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGATGGCGGAGGA]
[-] EMBL AU174349             [                                                                                                                           tttttTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGn                                                                                                                                                                          ]
[-] EMBL AU174348             [                                                                                                                                                                                      ACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGCTTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACGGAAGGGAACGGAATGG                                                                                                                  ]
[-] EMBL D42670               [                                                                                                                                                                                                                                                                                                                TGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAGTTGTTCTTCNTCTCTTG GCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCG CGNGCGGATGGCTGCCTGTCTGCGTCTG GTCTACCACCGCCCGGGACTGGACTGGACCT  CGNGNGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAA                                                                                                                                                                                                                    ]


>consensus_6821#0 AGAGCAATACCATTACAGGTAGAACTTTATTACTAAAGACAAAATTATTCTTGTAGTATG ATGCTAGTACTACACGTATGTACTACTAGTATATATGGAGAGATATGTCATGGTACACAC AGTGGCAGTGGCAGAATGTTCAATTTCTCCACAGAGACGACCAAAGGGATAGATGAGAAT ATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAG AAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAGAAAAAAAAAAGAGAAAAGA ATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGACTTATTAG TTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGC GGATGGCTGCCTGTCTGCGTCTGCGTCTACCACCGCCCGGGACTGGACTGGACCTCGCGC GCGCGCCTTGTGAATTTTGAGAGTAGAGGACGGGTAAAAACTCCCCGTATGTTATGATGC TTCTGCTGCACGTACTTGGTCCAGATGACGAGTGAATTGGCAAGGACGGACGGACGGACG GAAGGGAACGGAATGGGTAGGTACGGTAGTAGTTGTGTTCAGAGGAGGACGTCGGACTTG GCGGGTAGTCGCTTGTAGAAGTTGAAGGGGACGGACGGCTGCTTGCTGCGGAAGCGCGGA TGGCGGAGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)