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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6823 cluster # 6823       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6823#0 length = 941 sequences # 4  

consensusID : consensus_6823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 941
fasta sequence
                              [TTTTTTTTTTGGCACTTGAGAACCAAGCATCAGATGTCACTGGATAACCAATCACACAAACCAGTTTGTCAGGACATCCTTTGGAATGGGTTTCAGGAATCAATACAGATGACTTGCAAACCACATCGAACAAAATTTGAAAATATAATACGCACATAGCAGG---GCATAACAGAGATTTGTGATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACAACAGTAATTCTCCCATAGATTCAAACATAGGAAGATGCAACAGGTCTCCTTGAGCATTCAAAACTATGGTCACCTCCAAAAACAAGTCACAAGAAAGATGTTGACCTAAGCTTTTTTCTTAGATAATTTCTTGAAAGGTTTCTTCTGGGGCTTGAGCTTATCAGATCTCGAGGACATCTCTCTGTCTTTCCTTCTTCGCTTTTCCTTCTTCACCTTGTACATTGTGTTTGCCTTGCGAACATCAAGCTGTTCAGAGTTTCTGGCAAGTAGAGACATCAGAATTTTGTCATTCTGCTGTTTCCCCAGGTTGCCCATTCCCTCCCCTTCAGCAACTGGGATAAACTTTTTATGTTTGCCAGGATGCTTTGGAGGTTTCTCGCCAGGCAACTTCTCATCAAACTTCCCACCACTTGCTGTTGCAGATCCCATGCCAGCAACATTCTCAAGATCCTCTTTTCTAGATTTTTTCGGAAGATCAGCTTTAGTTCCTGTGATGGGCAAGGACGTTGCAGCAAGTTGTATATGACTTGGCAAAGCACCAACTTTTGCAGCTTTCTTTAAGTTCTCTA-GTCTGTTTTTTCCTTGCTTTTCTACCCGCTTCTTCTTT-TGCTTCCTTTGTGCGAAAGGATCAACTCCAGGCTCATCAGTGGATTTAGCTTCAACAATCGGAACCGATATGGGGATTGTGAGACGAAAGAGCT]

[-] EMBL BI812068             [TTTTTTTTTTGGCACTTGAGAACCAAGCATCAGATGTCACTGGATAACCAATCACACAAACCAGTTTGTCAGGACATCCTTTGGAATGGGTTTCAGGAATCAATACAGATGACTTGCAAACCACATCGAACAAAATTTGAAAATATAATACGCACATAGCAGG   GCATAACAGAGATTTGTGATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACAACAGTAATTCTCCCATAGATTCAAACATAGGAAGATGCAACAGGTCTCCTTGAGCATTCAAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB622552             [                                                                                                                                              ATATAATACGCACATAGCACGTCAGCATAACAGAGATTTGTGATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACAACAGTAATTCTCCCATAGATTCAAACATAGGAAGATGCAACAGGTCTCCTTGAGCATTCAAAACTATGGTCACCTCCAAAAACAAGTCACAAGAAAGATGTTGACCTAAGCTTTTTTCTTAGATAATTTCTTGAAAGGTTTCTTCTGGGGCTTGAGCTTATCAGATCTCGAGGACATCTCTCTGTCTTTCCTTCTTCGCTTTTCCTTCTTCACCTTGTACATTGTGTTTGCCTTGCGAACATCAAGCTGTTCAGAGTTTCTGGCAAGTAGAGACATCAGAATTTTGTCATTCTGCTGTTTCCCCAGGTTGCCCATTCCCTCCCCTTCAGCAACTGGGATAAACTTTTTATGTTTGCCAGGATGCTTTGGAGGTTTCTCGCCAGGCAACTTCTCATCAAACTTCCCACCACTTGCTGTTGCAGATCCCATGCCAGCAACATTCTCAAGATCCTCTTTTCTAGATTTTTTCGGAAGATCAGCTTTAGTTCCTGTGATGGGCAAGGACGTTGCAGCAAGTTGTATATGACTTGGCAAAGCACCAACTTTTGCAGCTTTCTTTAAGTTCTCTA GTCTGTTTTTTCCTTGCTTTTCTACCCGCTTCTTCTTT TGCTTCCTTTGTGCGAAAGGATCAACTCCAGGCTCATCAGTGGATTTAGCTTCAACAATCGGAACCGATATGGGGATTGTGAGACGAAAGAGCT]
[+] EMBL D42333               [                                                                                                                                                                                GATTTGTGATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACAACAGTAATTCTCCCATAGATTCAAACATAGGAAGA GCAACAGGTCTCCTTGAGCATTCAAAACTATGGTCACCTCCAAAAACAAGTCACATGAAAGATGTTGACCTAAGCTTTTTTCTTAGATGATTTCTTGAAAGG  TCTTCTGGGGCTTGA CTTATCAGATCTCGAGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA763174             [                                                                                                                                                                           tttttttTTTTTGATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACAACAGTAATTCTCCCATAGATTCAAACATAGGAAGATGCAACAGGTCTCCATGAGCATTCAAAACTATGATCACCTCCAAAAACAAGTCACAAGAAAGATGTTGACCTAAGCTTTTTTCTTAGATAATTTCTTGAAAGGTTTCTTCTGGGGCTTGAGCTTATCAGATCTCGAGGACATCTCTCTGTCTTTCCTTCTTCGCTTTTCCTTCTTCACCTTGTACATTGTGTTTGCCTTGCGAACATCAAGCTGTTCAGAGTTTCTGGCAAGTAGAGACATCAGAATTTTGTCATTCTGCTGTTTCCCCAGGTTGCCCATTCCCTCCCCTTCAGCAACTGGGATAAACTTTTTATGTTTGCCAGGATGCTTTGGAGGTTTCTCGCCGGGCAACTTCTCAGCAAACTTCCCACCACTTGCTGGTGCAGATCCCATGCCAGCAACATTCTCAAGATCCTCTTTTCTAGATTTTTTCGGAAGATCAGCTTTAGTTCCTGGGATGGGCAAGGACGTTGCACCAGGTTGTATATAACTTGGCAGAGCCGCAACTTTTGCAGCTTTCTTTAAGGTCTCTAGGCCGGTGTTTTCCTTGGTTTTCTACCCG GTCGTCTTTGTGCTT                                                                                         ]


>consensus_6823#0 TTTTTTTTTTGGCACTTGAGAACCAAGCATCAGATGTCACTGGATAACCAATCACACAAA CCAGTTTGTCAGGACATCCTTTGGAATGGGTTTCAGGAATCAATACAGATGACTTGCAAA CCACATCGAACAAAATTTGAAAATATAATACGCACATAGCAGGGCATAACAGAGATTTGT GATCTTGTTATATCATCATTCAGGCCTATGTCATAACTCTTAACCAGTTATAAAGGAACA ACAGTAATTCTCCCATAGATTCAAACATAGGAAGATGCAACAGGTCTCCTTGAGCATTCA AAACTATGGTCACCTCCAAAAACAAGTCACAAGAAAGATGTTGACCTAAGCTTTTTTCTT AGATAATTTCTTGAAAGGTTTCTTCTGGGGCTTGAGCTTATCAGATCTCGAGGACATCTC TCTGTCTTTCCTTCTTCGCTTTTCCTTCTTCACCTTGTACATTGTGTTTGCCTTGCGAAC ATCAAGCTGTTCAGAGTTTCTGGCAAGTAGAGACATCAGAATTTTGTCATTCTGCTGTTT CCCCAGGTTGCCCATTCCCTCCCCTTCAGCAACTGGGATAAACTTTTTATGTTTGCCAGG ATGCTTTGGAGGTTTCTCGCCAGGCAACTTCTCATCAAACTTCCCACCACTTGCTGTTGC AGATCCCATGCCAGCAACATTCTCAAGATCCTCTTTTCTAGATTTTTTCGGAAGATCAGC TTTAGTTCCTGTGATGGGCAAGGACGTTGCAGCAAGTTGTATATGACTTGGCAAAGCACC AACTTTTGCAGCTTTCTTTAAGTTCTCTAGTCTGTTTTTTCCTTGCTTTTCTACCCGCTT CTTCTTTTGCTTCCTTTGTGCGAAAGGATCAACTCCAGGCTCATCAGTGGATTTAGCTTC AACAATCGGAACCGATATGGGGATTGTGAGACGAAAGAGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)