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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6874 cluster # 6874       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6874#0 length = 571 sequences # 4  

consensusID : consensus_6874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 571
fasta sequence
                              [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC-TTTTAAAGATCCA-GTGC-TATTTGTTGGCCACCT-ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG-ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT-CCATGCCGTCCTGGCACATCTCAACTTTTGG-CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT-CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA-ATCGCTGCGCGAGTTTTGTCATACTTG-TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTG-AGCCAAAAAAAAAAAAAAAAA]

[+] EMBL BM422113             [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC TTTTAAAGATCCACGTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCCGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCC AACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTA CCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCNGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTCGTTGTTNNCATTG TGCCAAAAAAAAAAAAAAAAA]
[+] EMBL AU031900             [                                                                      TCTTTGCNTTTTAAAGATCCA GTGCTTATTTGTTGGCCACCTNTTCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGGAATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGNCATACATACGGTACATGATCCCATGCCGTCCTGGCACATCTCAACTTTTGGNCACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTANAT  CTGCGCGAGTTTTGTCATACTTGCCTG TGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaa aa                   ]
[+] EMBL BI805899             [                                                                                        CCA GTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTTCCCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTGCCGCCAAAAAAAAAA       ]
[+] EMBL AU173371             [                                                                                                                       ACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCNTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCNCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaaaa                    ]


>consensus_6874#0 TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAAT AACTTTGATTTCTTTGCTTTTAAAGATCCAGTGCTATTTGTTGGCCACCTATCAGACAAC TCTGTTCTAATGGTAGAGAAGAGATGGATGGATGTAGTTGAAGGTTTTGGCGCACCAGTT CATAGACATATATACGGTACATGATCCATGCCGTCCTGGCACATCTCAACTTTTGGCACT TGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGT TTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCA ACTAATATGGGTTAATGCTGTCAAATGGCTATTGTTCCTTGGGTAGCCTTGCTGTATTCT TTTTTCTTTTAGCGTACGAAATTTAGTGGACTAATCGCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTT GTTTGCATTGAGCCAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)