These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6874#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 571 fasta sequence [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC-TTTTAAAGATCCA-GTGC-TATTTGTTGGCCACCT-ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG-ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT-CCATGCCGTCCTGGCACATCTCAACTTTTGG-CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT-CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA-ATCGCTGCGCGAGTTTTGTCATACTTG-TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTG-AGCCAAAAAAAAAAAAAAAAA] [+] EMBL BM422113 [TTCAAACACAAAAGCTTAACGGAAGGCTCGAGAAGAAGATTGAGGCAAGAGATAAGGAATAACTTTGATTTCTTTGC TTTTAAAGATCCACGTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCCGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCC AACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTA CCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCNGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTCGTTGTTNNCATTG TGCCAAAAAAAAAAAAAAAAA] [+] EMBL AU031900 [ TCTTTGCNTTTTAAAGATCCA GTGCTTATTTGTTGGCCACCTNTTCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGGAATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGNCATACATACGGTACATGATCCCATGCCGTCCTGGCACATCTCAACTTTTGGNCACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTANAT CTGCGCGAGTTTTGTCATACTTGCCTG TGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaa aa ] [+] EMBL BI805899 [ CCA GTGC TATTTGTTGGCCACCT ATCAGACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTTCCCTTGGGTAGCCTTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCGCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCATTGCCGCCAAAAAAAAAA ] [+] EMBL AU173371 [ ACAACTCTGTTCTAATGGTAGAGAAGAGATGG ATGGATGTAGTTGAAGGTTTTGGCGCACCAGTTCATAGACATATATACGGTACATGAT CCATGCCGTCCTGGCACATCTCAACTTTTGG CACTTGCGACAGGCATCCCATTCTTTTGTCTTCACCCAAGATGTGAAATGCCATACATCGAAGTTTGTTAAGAGATCCAAACAGCTAGCAGCATAAAAATGTCTGCTGATATGGAGTTATAGCAACTAATATGGGTTAATGCTGTCAAATGGCTATTGTT CCTTGGGTAGCCNTGCTGTATTCTTTTTTCTTTTAGCGTACGAAATTTAGTGGACTA ATCNCTGCGCGAGTTTTGTCATACTTG TTGCTGCGCAAATTTTGGCATCTGTAAACTATGTATCAGTTATGTTATGTGTTATTTGTTGTTTGCAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||