These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6901#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1326 fasta sequence [TCGCGGCCACCGACATGTGGGCCCTCACCCCAAACAGCGGTGGGTCCTCCTGCCTCCCGGCGAGGCGCACCCCGCCGCCGCTCGCCGCCGCCGGCGAGGCCGGCTCGCTGGCCGCGGGGCCCGGGAGGTGGTGCTCGTGGAGGCGTCGTCAGCCGGCGGAGCGGTGGCCCAAGCTGGCGGTCAGCGCGTCAGGGAGGAAGAGCAAGGGCGGCCGCGACGAGGGCGGCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGGTGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATACTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAACTGTAATTCTCCTCCTAAGATT--GGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATA-CAAAAATGAAACACGTGAACCCATCGTTCCGCAA-CCAGGC-AACCCCTTTTAGTGATTGCT-CCCTCTTCTTTGGGGGACCTGTCGACATGAGCATATTCTTGATG-AGGACTACCGATGACAGACCAATT-AAGGGGTTCGAAGAGGTGTCGCCAGGCGTCTGCTTCGGTTTCAGGACTGACCTAGAGAAGGCCAGTGCTCTTTTGAAGAGTGGCGCGGTTAAGCCTGAGGACTTAAACTTCTATGTTGGGTACTCTGCCTGGGATTACGACCAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCAT-CAATTTTCTATGTGCCACATAAAAATCCG] [+] EMBL AK106349 [TCGCGGCCACCGACATGTGGGCCCTCACCCCAAACAGCGGTGGGTCCTCCTGCCTCCCGGCGAGGCGCACCCCGCCGCCGCTCGCCGCCGCCGGCGAGGCCGGCTCGCTGGCCGCGGGGCCCGGGAGGTGGTGCTCGTGGAGGCGTCGTCAGCCGGCGGAGCGGTGGCCCAAGCTGGCGGTCAGCGCGTCAGGGAGGAAGAGCAAGGGCGGCCGCGACGAGGGCGGCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGGTGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATACTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAACTGTAATTCTCCTCCTAAGATT GGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATA CAAAAATGAAACACGTGAACCCATCGTTCCGCAA CCAGGC AACCCCTTTTAGTGATTGCT CCCTCTTCTTTGGGGGACCTGTCGACATGAGCATATTCTTGATG AGGACTACCGATGACAGACCAATT AAGGGGTTCGAAGAGGTGTCGCCAGGCGTCTGCTTCGGTTTCAGGACTGACCTAGAGAAGGCCAGTGCTCTTTTGAAGAGTGGCGCGGTTAAGCCTGAGGACTTAAACTTCTATGTTGGGTACTCTGCCTGGGATTACGACCAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCAT CAATTTTCTATGTGCCACATAAAAATCCG] [-] EMBL AU032660 [ GCGGCGACGAGCCCAAGAAGAACAAGGCGGCGTCCTCCTCCTCCTCCGGAAAAGGTGATGCGTCTGCTCCCAGTGGAGATGTTTCAAATAATGAACTGCAATCCAATGACACAATGTATGTACCTGGTAACTTGTCATATTGGAGAGACGTTAGAGCAAGCTTTGTGGTTCCAAAGGTGCAAACAGTAGATGCACATACTCTACCACAAGCAGCTACGGATGCACCAGTGCACTGTCTTCCTCGGAAGTGGGCACATTCTATTCCAATGCCAGAATCTGGTTGTGTGCTGGTTGCTGCTGAAGAGCTTGATGGCAATGGTACGTTTGAGAGAANTGTAATTCTCCTCCTAAGATTTAGGTTCAAGAGATGCCTATGACGGCCCATTTGGCGTCATCCTAAACCGTCCACTGTATACCAAAAATGAAACACGTGAACCCATCGTTCCGCAACCCAGGCAAACCCTTTTTAGTGATTGCTCCCCTCTTCTTTGGGGGA CTGTCGACATGAGCATATTCTTGATGAAGGACTACCGATGACAGACCAATTAAAGGGGTTCGAAGAGGTGTCGCCAAGCGTCTGCTTt ] [-] EMBL OSS13119A [ ATG TGGGNACTCTGCCT GGATTACGACNAGTTGTTGAGCGAGATTGATCAAGGATACTGGCATGTCACTTCCTGTAGCTCAGGCCTGATAAGCGACTCCCTTGCAACAGATCCTTCTTGCCTATGGACTGAGATATTGAAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACAT ] [+] EMBL C74866 [ AAGCTGATGGGAGGCCAGTACGCAGAACTGAGTCAAAAGCCAAAGGAAGATGGCTCGTGAAAATTCTTGCTTGCTAGCATAGTTTGGCACAATTGACGTGCTTGGTTTGTACATAATTGGGAATAATCTCGCCCGGTCACTGGCCAGGGTAATTGAACAGTCCTAGTAGTAGTTTCATGTGGTCGTCTTTGTCCTCTGTATTACTTGAACAAATATTATGGAGTACTGGTGATAGAACGGTGTGGGCTGTGAATAATTACTGGAATTACATGCTTCCATCCAATTTTCTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||