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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7037 cluster # 7037       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7037#0 length = 767 sequences # 4  

consensusID : consensus_7037#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 767
fasta sequence
                              [CGGAGGCGGTCGCGTC-AGGAGG-CNGNANCNCGGNTACAGAGGATGCCG--GNGGTNNTTGCGGGTGGTGGTGGTTCCGGGAAGGGGGCGAAGAGGAAGGGATCTCGTGGGAGAGTCAGAGCCGAGAGGGCCAGGAAATGGCGGCGATCTCTCCAATTTGGCCTCCTTTCGAAGCGGAAGGAGAAAACATCATCTCGTTTACTTCACTATGTGTTACATAAGCAACTGTTGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACCCTCAGCACAGAAGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACTCTCAGCACAGAAGAAGTTTCAAAATACACATGATTGCATGTCAACTCATGAAAACAACCTGAATAAGCAGTACATCAGAGGAATGGATCCTTCTACTGGCATGGGCAGCAACCTGGTCAGGAAAGAGGCAGCAAACTCTTCTGTAAATAAACAAAACATAAAGGCCAGTGAACCAACTATCTATCCTCTAAATCCTGGATGTGAATTGGTGAAGAATGTNGCCTACCCTCCTAAGGATGATATTTTTGGAGATCTCCCTCTTTTGGAAAGTTCTAAAGTAATGTTCCATTCCGGAGTTGATGAACTCCCTACTGTTATAGAAGACTCTTTTGTAACAGATCAAAGTGGACCAGAAGCCATATCAGAAAATGTATCATTGAAACTAATACCACCTTCTGACATGTCAGTACAGACATCATCCACCCTCAAAGACTTGGTGAAAAA]

[+] EMBL C27562               [CGGAGGCGGTCGCGTCTAGGAGG CNGNANCNCGGNTACAGAGGATGCCG  GNGGTNNTTGCGGGTGGTGGTGGTTCCGGGAAGGGGGCGAAGAGGAAGGGATCTCGTGGGAGAGTCAGAGCCGAGA GGCCAGGAAATGGCGGCGATCTCTCCAATTTGGCCTCCTTTCGAAGCGGAAGGAGAAAACATCATCTCGTTTACTTCACTATGTGTTACATAAGCAACTGTTGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACCCTCAGCACAGANGAGTAAACACAAAGGTTCTACCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU069156             [         gCGCGGC AGGAGGCCCGCGCGACCGGTACAGAGGATGCCGGAGNGGTNGTTGCGGGTGGTGGTGGTTCCGGGAAGGGGGCGAAGAGGAAGGGATCTCGTGGGAGAGTCAGAGCCGAGAGGGCCAGGAAATGGCGGCGATCTCTCCAATTTGGCCTCCTTTCGAAGCGGAAGGAGAAAACATCATCTCGTTTACTTCACTATGTGTTACATAAGCAACTGTTGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACCCTCAGCACAGAAGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACTCTCAGCACAGAAGAAGTTTCAAAATACACATGATTGCATGTCAACTCATGAAAACAACCTGAATAAGCAGTACAT                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU085736             [                                                                           TTCCGGGNAGGGGGCGAAGAGGAAGGGATCTCGTGGGAGAGTCAGAGCCGAGAGGGCCAGGAAATGGCGGCGATCTCTCCAATTTGGCCTCCTTTCGAAGCGGAAGGAGAAAACATCATCTCGTTTACTTCACTATGTGTTACATAAGCAACTGTTGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACCCTCAGCACAGAAGAGTAAACACAAAGGTTCTACCCTGCGTACACAGAAAGAACTCTCAGCACAGAAGAAGTTTCAAAATACACATGATTGCATGTCAACTCATGAAAACAACCTGAATAAGCAGTACATCAGAGGAATGGATCCTTCTACTGGCATGGGCAGCAACCTGGTCAGGAAAGAGGCAGCAAACTCTTCTGTAAATAAACAAAACATAAAGGCCAGTGAACCAACTATCTATCCTCTAAATCCTGGATGTGAATTGGTGAAGAATGTNGCCTACCCTCCTAAGGATGATATTTTTGGAGATCTCCCTCTTTTGGAAAGTTCTAAAGTAATGTTCCATTCCGGAGTTGATGAACTCCCTACTGTTATAGAAGACTCTTTTGTAACAGATCAAAGTGGACCAGAAGCCATATCAGAAAATGTATCATTGAAACTAATACCACCTTCTGACATGTCAGTACAGACATCATCCACCCTCAAAGACTTGGTGAAAAA]
[+] EMBL AU166921             [                                                                                                                                                                                                                                                                                                                                                     AGTTTCAAAATACACATGATTGCATGTCAACTCATGAAAACAACCTGAATAAGCAGTACATCAGAGGAATGGATCCTTCTACTGGCATGGGCAGCAACCTGGTCAGGAAAGAGGCAGCAAACTCTTCTGTAAATAAACAAAACATAAAGGCCAGTGAACCAACTATCTATCCTCTAAATCCTGGATGTGAATTGGTGAAGAATGTAGCCTACCCTCCTAAGGATGATATTTTTGGAGATCTCCCTCTTTTGGAAAGTTCTAAAGTAATGTTCCATTCCGGAGTTGATGAACTCCCTACTGTTATAGAAGACTCTTTTGTAACAGATCAAAGTGGACCAGAAGCCATATCAGAAAATGTATCATTGAAACTAATACCACCTTNTGACATGTCAGTACAGACATCATCCACCCTCAAAGACTTGGTGAAAAA]


>consensus_7037#0 CGGAGGCGGTCGCGTCAGGAGGCNGNANCNCGGNTACAGAGGATGCCGGNGGTNNTTGCG GGTGGTGGTGGTTCCGGGAAGGGGGCGAAGAGGAAGGGATCTCGTGGGAGAGTCAGAGCC GAGAGGGCCAGGAAATGGCGGCGATCTCTCCAATTTGGCCTCCTTTCGAAGCGGAAGGAG AAAACATCATCTCGTTTACTTCACTATGTGTTACATAAGCAACTGTTGAGTAAACACAAA GGTTCTACCCTGCGTACACAGAAAGAACCCTCAGCACAGAAGAGTAAACACAAAGGTTCT ACCCTGCGTACACAGAAAGAACTCTCAGCACAGAAGAAGTTTCAAAATACACATGATTGC ATGTCAACTCATGAAAACAACCTGAATAAGCAGTACATCAGAGGAATGGATCCTTCTACT GGCATGGGCAGCAACCTGGTCAGGAAAGAGGCAGCAAACTCTTCTGTAAATAAACAAAAC ATAAAGGCCAGTGAACCAACTATCTATCCTCTAAATCCTGGATGTGAATTGGTGAAGAAT GTNGCCTACCCTCCTAAGGATGATATTTTTGGAGATCTCCCTCTTTTGGAAAGTTCTAAA GTAATGTTCCATTCCGGAGTTGATGAACTCCCTACTGTTATAGAAGACTCTTTTGTAACA GATCAAAGTGGACCAGAAGCCATATCAGAAAATGTATCATTGAAACTAATACCACCTTCT GACATGTCAGTACAGACATCATCCACCCTCAAAGACTTGGTGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)