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Oryza sativa
cluster # 7061 cluster # 7061       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7061#0 length = 914 sequences # 4  

consensusID : consensus_7061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 914
fasta sequence
                              [TGCTCTGACACAAACCAATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTGCTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGGCGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCGTCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCGTCGACTCCAACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCGAGCTCCGCACCCTGCACGACACCTACCCACGTGGCGCCGCCGCCGGCAGCTACGCCGCCACCTCAACGAGCGGCCGCCTCGGCAGCAGCAACGGCGGTTACTACTACTCCTCCCAGCTCTCCG-CCGGGCGCGGCGGCGCCTACAGCTCCGGCGGCCACCAGCTGTACGGCGGCGGCTACGACTCGCCGTACTACCACCAGGCGCCGCAGCATCCGTACGACGGCGGCTACTACCCGTCGCCGTACGGCGCCGCCGCGGTGCAGCACGAGTACTACACGACGAGCAGCAACGACGATCCCAACGGCTGCTCCATCATGTAGCAACGACTATAGTTTAAGCTTAGCTATTGTGTATAGCTGTTTCTATTTTTTTTTTTCTATGATTTCTTCTTCTCATTTCATTTCGGTGAGGTTTGAGCAGTGTTTACTACTACTATTTGCTGGTGAGGCTGCTAAATAACTGGGGAAATTTGTGCTTCAGTTGTTTTGTTTGTTCATCTCTGCATGTAAACAGATTTGTGTGAAGCCGTGATCGGTCGAGATAGAGGGGCTATGGTTTTTGTCAGCCCCTTCGATCGTTCCATTTGATTGTAATTAATTGTTAATTTGCAGCTG]

[+] EMBL AK108180             [TGCTCTGACACAAACCAATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTGCTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGGCGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCGTCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCGTCGACTCCAACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCGAGCTCCGCACCCTGCACGACACCTACCCACGTGGCGCCGCCGCCGGCAGCTACGCCGCCACCTCAACGAGCGGCCGCCTCGGCAGCAGCAACGGCGGTTACTACTACTCCTCCCAGCTCTCCG CCGGGCGCGGCGGCGCCTACAGCTCCGGCGGCCACCAGCTGTACGGCGGCGGCTACGACTCGCCGTACTACCACCAGGCGCCGCAGCATCCGTACGACGGCGGCTACTACCCGTCGCCGTACGGCGCCGCCGCGGTGCAGCACGAGTACTACACGACGAGCAGCAACGACGATCCCAACGGCTGCTCCATCATGTAGCAACGACTATAGTTTAAGCTTAGCTATTGTGTATAGCTGTTTCTATTTTTTTTTTTCTATGATTTCTTCTTCTCATTTCATTTCGGTGAGGTTTGAGCAGTGTTTACTACTACTATTTGCTGGTGAGGCTGCTAAATAACTGGGGAAATTTGTGCTTCAGTTGTTTTGTTTGTTCATCTCTGCATGTAAACAGATTTGTGTGAAGCCGTGATCGGTCGAGATAGAGGGGCTATGGTTTTTGTCAGCCCCTTCGATCGTTCCATTTGATTGTAATTAATTGTTAATTTGCAGCTG]
[+] EMBL AU163487             [           AAACCAATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTGCTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGGCGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCGTCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCGTCGACTCCAACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCGAG TCCGCACCCTGCACGACACCTACCCACGTGGCGCCGCCGCCGGCAG TACGCCGCCACCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU071085             [           AAACCAATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTGCTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGGCGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCGTCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCGTCGACTCCAACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCGAGCTCCGCACCCTGCACGACACCTACCCACGTGGCGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA754758             [                 ATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTGCTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGGCGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCGTCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCGTCGACTCCNACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCGAGCTCCGCACCCTGCACGACACCTACCCACGTGGCGCCGCCGCCGGCAGCTACGCCGCCACCTCAACGAGCGGCCGCCTCGGCAGCAGCAACGGCGGTTACTACTACTCCTCCCAGCTCTCGGNCGGGGCGCNGGGGNGCCTACNGCTCCGGCGGCCACCAGCTGTACGGCGGGGGCTACGACTCGCCGTACTACCCCCAGGCGCCGCAGCATCCGTACGACGGGGGCTACTACCCGTCGCCGTACGGCGCCGCCGCGGTGCAGGACGAGTACTACACGACGAGCAGCAACGACGATCCCAACGGCTGCTCCATCAT                                                                                                                                                                                                                                                                                                          ]


>consensus_7061#0 TGCTCTGACACAAACCAATTCGATCAATTCTGCTCTCTCTTCAGATCGAACGCTAGCTTG CTCGATCTGTTGCAAAATTGTACGGCGCCATGAGGACGGAGATGCTTATCAGGATGCAGG CGAGCTCGGAGAAGAATGGGAACGCCAAGGCCATGAAGGTGGCGGCGGCGATGGACGGCG TCGAGTCCGTGACGCTGGCCGGGGAAGGTCGGAACCTGCTGCGGGTGGTCGGCTCCGGCG TCGACTCCAACCACCTCACCAGCCGCCTCCGCCGGAAGGTCGGCCACGCCGACATCGTCG AGCTCCGCACCCTGCACGACACCTACCCACGTGGCGCCGCCGCCGGCAGCTACGCCGCCA CCTCAACGAGCGGCCGCCTCGGCAGCAGCAACGGCGGTTACTACTACTCCTCCCAGCTCT CCGCCGGGCGCGGCGGCGCCTACAGCTCCGGCGGCCACCAGCTGTACGGCGGCGGCTACG ACTCGCCGTACTACCACCAGGCGCCGCAGCATCCGTACGACGGCGGCTACTACCCGTCGC CGTACGGCGCCGCCGCGGTGCAGCACGAGTACTACACGACGAGCAGCAACGACGATCCCA ACGGCTGCTCCATCATGTAGCAACGACTATAGTTTAAGCTTAGCTATTGTGTATAGCTGT TTCTATTTTTTTTTTTCTATGATTTCTTCTTCTCATTTCATTTCGGTGAGGTTTGAGCAG TGTTTACTACTACTATTTGCTGGTGAGGCTGCTAAATAACTGGGGAAATTTGTGCTTCAG TTGTTTTGTTTGTTCATCTCTGCATGTAAACAGATTTGTGTGAAGCCGTGATCGGTCGAG ATAGAGGGGCTATGGTTTTTGTCAGCCCCTTCGATCGTTCCATTTGATTGTAATTAATTG TTAATTTGCAGCTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)