These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7075#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 689 fasta sequence [AGNTGGGCCACCGTCNTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT-CGTCACCGC-GCTCTTCCCCTTCA-TGGGCGA-T-TCGTCAACCTCTTC-GGC-TCCTT-CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT-CGTCCT-CAAGAT--CAAAGGG-AAGGA-TGAAG-CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC-AAGTGC-AGTGTGCTGTGATCA-GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAAAAGGACCTAACCAATGTTAAGCTATGCCAACCTATTACACTTGACGCCGAAAAAAAAAA] [+] EMBL AU095929 [AGNTGGGCCACCGTCNTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT CGTCACCGC GCTCTTCCCCTTCA TGGGCGA T TCGTCAACCTCTTC GGC TCCTT CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT CGTCCT CAAGAT CAAAGGG AAGGA TGAAG CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAAAA ] [-] EMBL BU673226 [ ACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT CGTCACCGC GCTCTTCCCCTTCA TGGGCGACT TCGTCAACCTCTTC GGC TCCTT CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT CGTCCT CAAGAT CAAAGGG AAGGA TGAAG CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGAT ] [+] EMBL AU095840 [ CTTCCGTCACCGCAGCTNTTCCCCTTCATTGGGC A TNTCGTCAACCTCTTCAGGCATCCTTACGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGTCCGTCCTCCAAGATTCCAAAGGGAAAGGATTGAAGTCAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAA ] [+] EMBL BI812693 [ ATTTGCAAAGTGCAAGTGTGCTGTGATCAGGCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTTCAAGCGCAGC CTGTGATTA CGGGTTGACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAACACATTGGACCTAACCAATGTTAAGCTATGCCAACCTATTACACTTGACGCCGAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||