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Oryza sativa
cluster # 7085 cluster # 7085       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7085#0 length = 1299 sequences # 4  

consensusID : consensus_7085#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1299
fasta sequence
                              [CATAGCGAGCAGTGGTGGTCTGCACTCTGCAGGCAGGCAGGCACCCAGGCCTGCAGCTCGATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCTCTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCCTGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCCACCGCTCCGGGCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTGTCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTCGGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCCGCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCGTTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAGGAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTTTACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCTGATTCCCCCGTGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGGTACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGCCTCCTTGATGGGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAACATTAGTTGATTGGAGAAAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAACAAGAACAGGAAGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCATCCCAGCGACATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTGCAGCCTACGTGACTTGATTATTAACGAGGAAAAAAAAAA]

[+] EMBL AK066402             [CATAGCGAGCAGTGGTGGTCTGCACTCTGCAGGCAGGCAGGCACCCAGGCCTGCAGCTCGATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCTCTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCCTGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCCACCGCTCCGGGCACCG     AGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTGTCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTCGGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCCGCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCGTTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAGGAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTTTACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCTGATTCCCCC  GTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGGTACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGCCTCCTTGATGGGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAACATTAGTTGATTGGAG AAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAACAAGAACAGGAAGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCATCCCAGCGACATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTGCAGCCTACGTGACTTG                       ]
[+] EMBL AK061905             [                   CTGCACTCTGCAGGCAGGCAGGCACCCAGGCCTGCAGCTCGATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCTCTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCCTGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCCACCGCTCCGGGCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTGTCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTCGGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCCGCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCGTTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAGGAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGACGGACGGCAACGCGCCGGACTTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTTTACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCTGATTCCCCCGTGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGGTACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGCCTCCTTGATGGGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAACATTAGTTGATTGGAGAAAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAACAAGAACAGGAAGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCATCCCAGCGACATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTGCAGCCTACGTGACTTGAT                     ]
[+] EMBL CB644247             [                                            CCAGGCCTGCAGCTCGATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCTCTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCCTGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCCACCGCTCCGGGCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTGTCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTCGGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCCGCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCGTTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAGGAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB644249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCGAAGCTCACGCGGGAGGAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTTTACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCTGATTCCCCCGTGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGGTACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGCCTCCTTGATGGGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAACATTAGTTGATTGGAGAAAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAACAAGAACAGGAAGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCATCCCAGCGACATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTGCAGCCTACGTGACTTGATTATTAACGAGGAAAAAAAAAA]


>consensus_7085#0 CATAGCGAGCAGTGGTGGTCTGCACTCTGCAGGCAGGCAGGCACCCAGGCCTGCAGCTCG ATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCT CTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCC TGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCC ACCGCTCCGGGCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTG TCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTC GGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCC GCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCG TTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAG GAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGC GAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAG TCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTG CCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAG GAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTT TACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCT GATTCCCCCGTGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGG TACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGC CTCCTTGATGGGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAA CATTAGTTGATTGGAGAAAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAAC AAGAACAGGAAGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCA TCCCAGCGACATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTG CAGCCTACGTGACTTGATTATTAACGAGGAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)