cluster # 71

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Oryza sativa
cluster # 71 cluster # 71 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_71#0 length = 540 sequences # 2

consensusID : consensus_71#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 540
fasta sequence

                              [CACTGTGCGTTCCCCCTTCCACGCAGCCTCGTCGCGTACCCGAC-GTGCTCGGCAGCTACGC-CCGTCCAT-GCGCCCGC-GC-GCCAAGGACCTGGCCCTCCCCGTCTCCGGCCTGTCGGCGGAGGAGAACGGCAAGGCGAAGGAGGTGGTGGTGTACGCGACGGTGGCGCTGCCGGCCGGGAAGGGGACCAAGTTCAACCACGTGTGGCAGCAGGGCAGCTCGGTGGCCGGCGACGTGCCGGCGGCGCACCCCACCTCCGGGGACAACGTCCTCTCCGTCGGCAGCATCGACTTCAGCAAGTGATCGATCGTACATATATACTGGTATATACGTACACTTGTTCGATCGTATACGTACGTACGCCCGGCTGCTTGTAATGTTGGTATACAAGTATATTCATGTACACATGTGTTAATTATTTATGCTTCTGGTAGATCGGCTCCCATTAGATGTGTGGAGTATATGTATGATGATTATGTCAGTGAGACTCCATGTATGTATTGTCTATATATATGTACAGCCGGAAAGTTTGCAATGTAAAA]

[+] EMBL BM037686             [CACTGTGCGTTCCCCCTTCCACGCAGCCTCGTCGCGTACCCGAC GTGCTCGGCAGCTACGC CCGTCCAT GCGCCCGC GC GCCAAGGACCTGGCCCTCCCCGTCTCCGGCCTGTCGGCGGAGGAGAACGGCAAGGCGAAGGAGGTGGTGGTGTACGCGACGGTGGCGCTGCCGGCCGGGAAGGGGACCAAGTTCAACCACGTGTGGCAGCAGGGCAGCTCGGTGGCCGGCGACGTGCCGGCGGCGCACCCCACCTCCGGGGACAACGTCCTCTCCGTCGGCAGCATCGACTTCAGCAAGTGATCGATCGTACATATATACTGGTATATACGTACACTTGTTCGATCGTATACGTACGTACGCCCGGCTGCTTGTAATGTTGGTATACAAGTATATTCATGTACACATGTGTTAATTATTTATGCTTCTGGTAGATCGGCTCCCATTAGATGTGTGGAGTATATGTATGATGATTATGTCAGTGAGACTCCATGTATGTATTGTCTATATATATGTACAGCCGGAAAGTTTGCAATGTAAAA]
[+] EMBL AK106063             [                 caacgGCAGCCTCGTCGCGTACCCGACGGTGCTCGGCAGCTACGCGCCGTCCATGGCGCCCGCGGCGGCCAAGGACCTGGCCCTCCCCGTCTCCGGCGTGTCGGCGGAGGAGAACGGCAAGGCGAAGGAGGTGGTGGTGTACGCGACGGTGGCGCTGCCGGCCGGGAAGGGGACCAAGTTCAACCACGTGTGGCAGCAGGGCAGCTCGGTGGCCGGCGACGTGCCGGCGGCGCACCCCACCTCCGGGGACAACGTCCTCTCCGTCGGCAGCATCGACTTCAGCAAGTGATCGATCGTACATATATACTGGTATATACGTACACTTGTTCGATCGTATACGTACGTACGCCCGGCTGCTTGTAATGTTGGTATACAAGTATATTCATGTACACATGTGTTAATTATTTATGCTTCTGGTAGATCGGCTCCCATTAGATGTGTGGAGTATATGTATGATGATTATGTCAGTGAGACTCCATGTATGTATTGTCTATATATATGTACAGCCG                   ]




>consensus_71#0
CACTGTGCGTTCCCCCTTCCACGCAGCCTCGTCGCGTACCCGACGTGCTCGGCAGCTACG
CCCGTCCATGCGCCCGCGCGCCAAGGACCTGGCCCTCCCCGTCTCCGGCCTGTCGGCGGA
GGAGAACGGCAAGGCGAAGGAGGTGGTGGTGTACGCGACGGTGGCGCTGCCGGCCGGGAA
GGGGACCAAGTTCAACCACGTGTGGCAGCAGGGCAGCTCGGTGGCCGGCGACGTGCCGGC
GGCGCACCCCACCTCCGGGGACAACGTCCTCTCCGTCGGCAGCATCGACTTCAGCAAGTG
ATCGATCGTACATATATACTGGTATATACGTACACTTGTTCGATCGTATACGTACGTACG
CCCGGCTGCTTGTAATGTTGGTATACAAGTATATTCATGTACACATGTGTTAATTATTTA
TGCTTCTGGTAGATCGGCTCCCATTAGATGTGTGGAGTATATGTATGATGATTATGTCAG
TGAGACTCCATGTATGTATTGTCTATATATATGTACAGCCGGAAAGTTTGCAATGTAAAA

clustalw multiple alignements is not computed in this case