These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7148#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2606 fasta sequence [GCACTAGTCTTCTTCCCACTCGCGGTCGCGGCGAGTACGTACGTGACCGAATGGTGCTCCTCCTGCTGCTCCTGCTCGCGCTCCCGGCGGCGGCGGGCGGGCTGGCGGCGGACGGGCAGGCGCTGCTGGCCTTCAAGGCGGCCGTGCTGCGGGACCCCGAGGGCGCGCTCGCCGACTGGGACGCCTCCACCGCCGCCGACCCCTGCGCCTGGAACGGCGTCTCCTGCGGCGCCGGGTCCGGGGCCGGGGGCGCCGACCGCCGCGTCGTGGCGCTGTCCCTCCCGAGGAAGGGCCTCGTGGGCTCCCTCCCGGCGTCGCCGCTCCCGGCCTCGCTCCGCCACCTCAACCTCCGCAGCAACCGCCTCTTCGGCGAGCTCCCCGCGCCGCTCCTCTCCGCTGCGGCGGGGCTGCAGAGCGTCGTGCTGTACGGGAACGAGCTGTACGGGCCGATCCCGCCGGAGCTCGGCGACCTCCCCTACCTCCAAATCCTCGACCTCTCGTCCAACTCCCTCAACGGCACGCTCCCACCCGCGATCCTGAGATGCCGCCGCCTCCGCTCCCTCGCGCTCGGCTGGAACAACCTCACCGGCGCGCTGCCGCAGGGGTTTGCCAGGGGCCTGTCGGCGCTGGAGCACCTCGATTTGTCCCACAACCGCTTCTCCGGCGCCGTCCCGGAGGACATCGGCAACCTGTCCAGGCTCGAGGGGACGGTCGACCTCTCGCACAACCAGTTCTCCGGCCAGATTCCGGCGAGCCTTGGAAGATTGCCGGAGAAGGTCTACATTGATCTCACGTACAACAATCTGTCCGGCCCGATTCCGCAGAATGGGGCGCTGGAGAACCGGGGGCCGACGGCGTTCGTCGGCAACCCGGGCCTCTGCGGGCCGCCGCTCAAGAACCCGTGCTCGCCGGACGCCATGCCGTCGTCCAATCCGTTTGTGCCCAAGGATGGGGGCTCCGGCGCCCCCGGTGCTGGGAAGAACAAGGGGTTGGGGAAGGTTGCCATTGTAGCCATTGTGCTCAGTGATGTGGTGGGGATTCTGATCATTGCACTGGTGTTCTTCTACTGCTATTGGAGGGCTGTTTCCTCCAAGGAGAAGGGGAATGGTGGGGCTGCTGGTTCTGAGGGGTCCAGGTGTGGCAAGGATTGTGGGTGTTTTAGCCGGGACGAATCCGCCACGCCGTCGGAGCACACCGAGCAGTATGACCTCGTGCCGTTGGACCAGCAAGTGAGGTTCGATCTCGATGAGCTGCTCAAGGCATCAGCATTTGTGCTTGGGAAGAGCGGCATCGGGATCGTGTATAAGGTGGTTCTTGAGGACGGGCTTACGATGGCCGTCAGGCGGCTAGGAGAAGGGGGACTGCAGAGGTTTAAGGAGTTCCAGACTGAGGTTGAGGCCATTGGCAAGGTCCGCCATCCCAGCATTGTTACCTTGAGGGCTTATTACTGGTCTTATGATGAGAAGTTGTTGATATATGATTACATCCCTAATGGCAGCCTCTCTGCAGCAATCCATGGTAAACCTGGGACAATGACATTCACACCATTGCCATGGGATGGACGTCTAAAAATCATGCAAGGGGTTGCAAAGGGGCTATCTTTCTTGCATGAATTTAGCCATAAAAAGTATATCCATGGGGACTTAAGGCCAAATAATGTCCTCCTTGGATCAAACATGGAGCCATACATATCAGATTTTGGGCTCGGACGGCTTGCAAATATTGCTGGAGGATCACCTTTCACACAATCAGATCATGCTGGTA-TAGAGAAAGCTCAGAGCCAGCAGTCCGATGCCTCGGTGAGCCCTCTTGTGGGCAAAGGATCATGCTATCAAGCACCAGAAGCACTGAAAACACTGAAACCATCTCAGAAATGGGATGTATACTCCTATGGTGTGATCTTGCTGGAAATGATCACCGGCAGATCGCCGGTTGTTCTCTTGGAGACTATGCAGATGGACCTTGTGCAATGGGTGCAGTTCTGTATTGAAGAAAAGAAACCATCTGCCGATGTGCTCGATCCTTCTCTCGCCAGAGACTCTGAACGGGAAGATGAGATGATCGCAGCACTGAAAGTTGCTCTCGCTTGCGTTCAGGCCAATCCAGAGCGAAGGCCCTCTATGAGGCATGTCGCAGGAACCCTGGATCACCTCAATGGTTCAGGCTAGAAAAGTAGTATCATGGAAGGCGGTCATTTTTTAGAGCATTTGATGGTTGTACAGCTCAAGGAAGGCAAGGAAGCTTAGGTGACTCAAGCTTCATCAGTTCGCTATGTAAAATTGTCATTTTCGCAGGACCCTCAGATTCTGCTCCGCTCTTAACATGTTAGATAGCCTTTTTCTGTTAGCTTGCTATCATGAGTTATGACTATTGTGCTTGCCTATAAGTCATGGGAATGGGTGAATTTAACTGTGTATGCTTGCAGCTTGCTCTCTGATAGTCTGAATGAACAAGAACTGATAGGATTATATGGAGCACTTTGTTTGGAGAACAGAGCCACGGATGTCATTGAGATAGGGGTGGCAAATAGTTATTTGCCAAATCTAAAAGTGGCAAATAGTTAAAACCCCCTCTCCTTGTACTACTTAATTGGTATCAATTTTTTT] [+] EMBL AK069218 [GCACTAGTCTTCTTCCCACTCGCGGTCGCGGCGAGTACGTACGTGACCGAATGGTGCTCCTCCTGCTGCTCCTGCTCGCGCTCCCGGCGGCGGCGGGCGGGCTGGCGGCGGACGGGCAGGCGCTGCTGGCCTTCAAGGCGGCCGTGCTGCGGGACCCCGAGGGCGCGCTCGCCGACTGGGACGCCTCCACCGCCGCCGACCCCTGCGCCTGGAACGGCGTCTCCTGCGGCGCCGGGTCCGGGGCCGGGGGCGCCGACCGCCGCGTCGTGGCGCTGTCCCTCCCGAGGAAGGGCCTCGTGGGCTCCCTCCCGGCGTCGCCGCTCCCGGCCTCGCTCCGCCACCTCAACCTCCGCAGCAACCGCCTCTTCGGCGAGCTCCCCGCGCCGCTCCTCTCCGCTGCGGCGGGGCTGCAGAGCGTCGTGCTGTACGGGAACGAGCTGTACGGGCCGATCCCGCCGGAGCTCGGCGACCTCCCCTACCTCCAAATCCTCGACCTCTCGTCCAACTCCCTCAACGGCACGCTCCCACCCGCGATCCTGAGATGCCGCCGCCTCCGCTCCCTCGCGCTCGGCTGGAACAACCTCACCGGCGCGCTGCCGCAGGGGTTTGCCAGGGGCCTGTCGGCGCTGGAGCACCTCGATTTGTCCCACAACCGCTTCTCCGGCGCCGTCCCGGAGGACATCGGCAACCTGTCCAGGCTCGAGGGGACGGTCGACCTCTCGCACAACCAGTTCTCCGGCCAGATTCCGGCGAGCCTTGGAAGATTGCCGGAGAAGGTCTACATTGATCTCACGTACAACAATCTGTCCGGCCCGATTCCGCAGAATGGGGCGCTGGAGAACCGGGGGCCGACGGCGTTCGTCGGCAACCCGGGCCTCTGCGGGCCGCCGCTCAAGAACCCGTGCTCGCCGGACGCCATGCCGTCGTCCAATCCGTTTGTGCCCAAGGATGGGGGCTCCGGCGCCCCCGGTGCTGGGAAGAACAAGGGGTTGGGGAAGGTTGCCATTGTAGCCATTGTGCTCAGTGATGTGGTGGGGATTCTGATCATTGCACTGGTGTTCTTCTACTGCTATTGGAGGGCTGTTTCCTCCAAGGAGAAGGGGAATGGTGGGGCTGCTGGTTCTGAGGGGTCCAGGTGTGGCAAGGATTGTGGGTGTTTTAGCCGGGACGAATCCGCCACGCCGTCGGAGCACACCGAGCAGTATGACCTCGTGCCGTTGGACCAGCAAGTGAGGTTCGATCTCGATGAGCTGCTCAAGGCATCAGCATTTGTGCTTGGGAAGAGCGGCATCGGGATCGTGTATAAGGTGGTTCTTGAGGACGGGCTTACGATGGCCGTCAGGCGGCTAGGAGAAGGGGGACTGCAGAGGTTTAAGGAGTTCCAGACTGAGGTTGAGGCCATTGGCAAGGTCCGCCATCCCAGCATTGTTACCTTGAGGGCTTATTACTGGTCTTATGATGAGAAGTTGTTGATATATGATTACATCCCTAATGGCAGCCTCTCTGCAGCAATCCATGGTAAACCTGGGACAATGACATTCACACCATTGCCATGGGATGGACGTCTAAAAATCATGCAAGGGGTTGCAAAGGGGCTATCTTTCTTGCATGAATTTAGCCATAAAAAGTATATCCATGGGGACTTAAGGCCAAATAATGTCCTCCTTGGATCAAACATGGAGCCATACATATCAGATTTTGGGCTCGGACGGCTTGCAAATATTGCTGGAGGATCACCTTTCACACAATCAGATCATGCTGGTA TAGAGAAAGCTCAGAGCCAGCAGTCCGATGCCTCGGTGAGCCCTCTTGTGGGCAAAGGATCATGCTATCAAGCACCAGAAGCACTGAAAACACTGAAACCATCTCAGAAATGGGATGTATACTCCTATGGTGTGATCTTGCTGGAAATGATCACCGGCAGATCGCCGGTTGTTCTCTTGGAGACTATGCAGATGGACCTTGTGCAATGGGTGCAGTTCTGTATTGAAGAAAAGAAACCATCTGCCGATGTGCTCGATCCTTCTCTCGCCAGAGACTCTGAACGGGAAGATGAGATGATCGCAGCACTGAAAGTTGCTCTCGCTTGCGTTCAGGCCAATCCAGAGCGAAGGCCCTCTATGAGGCATGTCGCAGGAACCCTGGATCACCTCAATGGTTCAGGCTAGAAAAGTAGTATCATGGAAGGCGGTCATTTTTTAGAGCATTTGATGGTTGTACAGCTCAAGGAAGGCAAGGAAGCTTAGGTGACTCAAGCTTCATCAGTTCGCTATGTAAAATTGTCATTTTCGCAGGACCCTCAGATTCTGCTCCGCTCTTAACATGTTAGATAGCCTTTTTCTGTTAGCTTGCTATCATGAGTTATGACTATTGTGCTTGCCTATAAGTCATGGGAATGGGTGAATTTAACTGTGTATGCTTGCAGCTTGCTCTCTGATAGTCTGAATGAACAAGAACTGATAGGATTATATGGAGCACTTTGTTTGGAGAACAGAGCCACGGATGTCATTGAGATAGGGGTGGCAAATAGTTATTTGCCAAATCTAAAAGTGGCAAATAGTTAAAACCCCCTCTCCTTGTACTACTTAATTGGTATCAATTTTTTT] [+] EMBL AU166413 [ ACGTACGTGACCGAATGGTGCTCCTCCTGCTGCTCCTGCTCGCGCTCCCGGCGGCGGCGGGCGGGCTGGCGGCGGACGGGCAGGCGCTGCTGGCCTTCAAGGCGGCCGTGCTGCGGGACCCCGAGGGCGCGCTCGCCGACTGGGACGCCTCCACCGCCGCCGACCCCTGCGCCTGGAACGGCGTCTCCTGCGGCGCCGGGTCCGGGGCC ] [+] EMBL CA753529 [ AGCAGTATGACCTCGTGCCGTTGGACCAGCAAGTGAGGTTCGATCTCGATGAGCTGCTCAAGGCATCAGCATTTGTGCTTGGGAAGAGCGGCATCGGGATCGTGTATAAGGTGGTTCTTGAGGACGGGCTTACGATGGCCGTCAGGCGGCTAGGAGAAGGGGGACTGCAGAGGTTTAAGGAGTTCCAGACTGAGGTTGAGGCCATTGGCAAGGTCCGCCATCCCAGCATTGTTACCTTGAGGGCTTATTACTGGTCTTATGATGAGAAGTTGTTGATATATGATTACATCCCTAATGGCAGCCTCTCTGCAGCAATCCATGGTAAACCTGGGACAATGACATTCACACCATTGCCATGGGATGGACGTCTAAAAATCATGCAAGGGGTTGCAAAGGGGCTATCTTTCTTGCATGAATTTAGCCCTAAAAAGTATATCCATGGGGACTTAAGGCCAAATAATGTCCTCCTTGGATCAAACATGGAGCCATACATATCAGATTTTGGGCTCGGACGGCTTGCAAATATTGCTGGAGGATCACC TTCACACAATCAGATCATGCTGGTATTAGAGAAAGCTCAGAGCCAGCAGTCCGATGCCTCGGTGAGCCCTC TGTGGGC AAGGATCATGCTATC AGCACCAGAA CACTG AAACACT ] [+] EMBL AU166414 [ GCAGATGGACCTTGTGCAATGGGTGCAGTTCTGTATTGAAGAAAAGAAACCATCTGCCGATGTGCTCGATCCTTCTCTCGCCAGAGACTCTGAACGGGAAGATGAGATGATCGCAGCACTGAAAGTTGCTCTCGCTTGCGTTCAGGCCAATCCAGAGCGAAGGCCCTCTATGAGGCATGTCGCAGAAACCCTGGATCACCTCAATGGTTCAGGCTAGAAAAGTAGTATCATGGAAGGCGGTCATTTTTTAGAGCATTTGATGGTTGTACAGCTCAAGGAAGGCAAGGAAGCTTAGGTGACTCAAGCTTCATCAGTTCGCTATGTAAAATTGTCATTTTCGCAGGACCCTCAGATTCTGCTCCGCTCTTAACATGTTAGATAGCCTTTTTCTGTTAGCTTGCTATCATGAGTTATGACTATTGTGCTTGCCTATAAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||