Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7170 cluster # 7170       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7170#0 length = 2294 sequences # 3  
consensus_7170#1 length = 808 sequences # 1  

consensusID : consensus_7170#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2294
fasta sequence
                              [TAAATAGTTAAATTTCCCTTTCGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCCCGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCTGCTGCTTCCGCCGCATCCATCCCTGGTGAGCACATCCTCCGCCACCGCCGCCTGCGCCGATCCCCATCCATCCCGCGAGCGAGCAGGGGCGCCCCTCGTTCGTCCCGCTGCTTCCGCCGCATCCGTTGCGCACATCCTCTTTCCCATATCTCTCTCTACCCACGCACTTTTTTCTTTATCGAATTTGCGTTAACCCTAGCTTCTGTTCTGGAAATTTGCCTTAACCTTGATACTGATAACAGTTTGTTTGTTCCCAAAAAGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTGGTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATCATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGTGCTGCATCTGCTGATGTTGCTACAGCATGTGAAATGTGATATGTTATGCTGCTGTACCTTTTTTTTCGCCCGCAAATTTCATTAACACCACTTCAGGTTGGCAGGACATGCACTTATGTCTTCAATGAAATTAGAGAGATTCCAAATTTCTTTTTTTTTCTCTTGGCACCAGACCACTTTATAAGATGTACAACAAGAAGTTTGTTTTATTTTTGGTCTTTTTTCTAACAAATGTATTTGGCATCTATTAACAAAAGTTTGTTTTAACTACTAATAGTGTATTTCCACTTGTAGCAGTGGCGTATGAGTGCTTGCTGAACATGTGCCTTTATATATTAACAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGAGCAAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGACCTAAGGAAGAAAAGCCAAAGGTCCCTACTTCTGTGAAGAGAACACTTGCACTTCTAGGTCAGAGGAATCTTGAGACCGAGAATCCCTTGGAGCATGTAATTGGTGAAACATCTAGCGAGGAGGAA----GACGATGCTCAAAACAACCTGGCTTTGATCAACAAAGATGTCAAGGGGCAAACTATGGCTGACATATTTCAACAAGTATTTAATGCAACAAGCATGGACTGTTTTACACTGCCCGTGAGATCATATGGATCTGGTTATTATGGAAGGATGCAACAAATTCTGCAGATGGAGAAAGATAGGCATGCTGAGTTCCTAAGACAGTATAACAGAGAGCAAGATTATTTAGGCGATCCAAAGGGGGTTACAGTTCAGATTTTGTCAAGGTCTCTGGAAGGAAAGCTAACAATCTGCCGCTGCTTGTTCATGGAGAAGAGCAATTTGGCCACAACAGGGGAAGTGTCAACAGATCTTGACATGGATAATAGCAGCGTGAAAAGGACCATCATCTTCAGTCCCAAGATATGTGACAACGTGGATCTTCTAGCAGGAAACATTATTCACATCTTCCCACCATGGAAAGAAGTTAAGGTGAAAGAAGAGACGGTGATTCTTTGCACCTACTTCTCGCATCGTGGAGTTTGATACTACTTGAGATGCTTCTTTTTTAGATGAATTTATCATGAGTAAGAGGAAGCAACGATTATGCATGACCGTGTCCTGTGTATGTTGGCGCTCCCGAGTCCCGAGTCACTGCACGACCTGCTGACCTGATAGTTTAGAAGTTAGAACCCTCCTGATGACCACATGATGTAGCCGAGTTTGTACACAGCGTACTTTGACACAACCAGTATATAATGCTAATACATCATTGCCTTTTTTATTCTGGAGGAGAATGTTTTTTTTTTTTAACACAACCAGCAGCATTGCCTTC]

[+] EMBL AK067559             [TAAATAGTTAAATTTCCCTTTCGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCCCGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCTGCTGCTTCCGCCGCATCCATCCCTGGTGAGCACATCCTCCGCCACCGCCGCCTGCGCCGATCCCCATCCATCCCGCGAGCGAGCAGGGGCGCCCCTCGTTCGTCCCGCTGCTTCCGCCGCATCCGTTGCGCACATCCTCTTTCCCATATCTCTCTCTACCCACGCACTTTTTTCTTTATCGAATTTGCGTTAACCCTAGCTTCTGTTCTGGAAATTTGCCTTAACCTTGATACTGATAACAGTTTGTTTGTTCCCAAAAAGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTGGTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATCATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGTGCTGCATCTGCTGATGTTGCTACAGCATGTGAAATGTGATATGTTATGCTGCTGTACCTTTTTTTTCGCCCGCAAATTTCATTAACACCACTTCAGGTTGGCAGGACATGCACTTATGTCTTCAATGAAATTAGAGAGATTCCAAATTTCTTTTTTTTTCTCTTGGCACCAGACCACTTTATAAGATGTACAACAAGAAGTTTGTTTTATTTTTGGTCTTTTTTCTAACAAATGTATTTGGCATCTATTAACAAAAGTTTGTTTTAACTACTAATAGTGTATTTCCACTTGTAGCAGTGGCGTATGAGTGCTTGCTGAACATGTGCCTTTATATATTAACAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGAGCAAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGACCTAAGGAAGAAAAGCCAAAGGTCCCTACTTCTGTGAAGAGAACACTTGCACTTCTAGGTCAGAGGAATCTTGAGACCGAGAATCCCTTGGAGCATGTAATTGGTGAAACATCTAGCGAGGAGGAA    GACGATGCTCAAAACAACCTGGCTTTGATCAACAAAGATGTCAAGGGGCAAACTATGGCTGACATATTTCAACAAGTATTTAATGCAACAAGCATGGACTGTTTTACACTGCCCGTGAGATCATATGGATCTGGTTATTATGGAAGGATGCAACAAATTCTGCAGATGGAGAAAGATAGGCATGCTGAGTTCCTAAGACAGTATAACAGAGAGCAAGATTATTTAGGCGATCCAAAGGGGGTTACAGTTCAGATTTTGTCAAGGTCTCTGGAAGGAAAGCTAACAATCTGCCGCTGCTTGTTCATGGAGAAGAGCAATTTGGCCACAACAGGGGAAGTGTCAACAGATCTTGACATGGATAATAGCAGCGTGAAAAGGACCATCATCTTCAGTCCCAAGATATGTGACAACGTGGATCTTCTAGCAGGAAACATTATTCACATCTTCCCACCATGGAAAGAAGTTAAGGTGAAAGAAGAGACGGTGATTCTTTGCACCTACTTCTCGCATCGTGGAGTTTGATACTACTTGAGATGCTTCTTTTTTAGATGAATTTATCATGAGTAAGAGGAAGCAACGATTATGCATGACCGTGTCCTGTGTATGTTGGCGCTCCCGAGTCCCGAGTCACTGCACGACCTGCTGACCTGATAGTTTAGAAGTTAGAACCCTCCTGATGACCACATGATGTAGCCGAGTTTGTACACAGCGTACTTTGACACAACCAGTATATAATGCTAATACATCATTGCC                                                          ]
[+] EMBL BF430557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACTGTCATTAGCTTGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGAGCGAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGGCCTAAGGAAGAAAAGCCAAAGGTCCCTACTTCTGTGAAGAGAACACTTGCTCTTCTAGGTCAGAGGAATCTTGAGACCGAGAATCCCTTGGAGCATGTAATTGGTGAAACATCTAGCGAGGAGGAAGTAGGACGATGCTCAAAACAACCTGGCTTTGATCAACAACGATGTCAAGGGGCAAACTATGGCTGACATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB964838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAATCTGCCGCTGCTTGTTCATGGAGAAGAGCAATTTGGCCACAACAGGGGAAGTGTCAACAGATCTTGACATGGATAATAGCAGCGTGAAAAGGACCATCATCTTCAGTCCCAAGATATGTGACAACGTGGATCTTCTAGCAGGAAACATTATTCACATCTTCCCACCATGGAAAGAAGTTAAGGTGAAAGAAGAGACGGTGATTCTTTGCACCTACTTCTCGCATCGTGGAGTTTGATACTACTTGAGATGCTTCTTTTTTAGATGAATTTATCATGAGTAAGAGGAAGCAACGATTATGCATGACCGTGTCCTGTGTATGTTGGCGCTCCCGAGTCCCGAGTCACTGCACGACCTGCTGACCTGATAGTTTAGAAGTTAGAACCCTCCTGATGACCACATGATGTAGCCGAGTTTGTACACAGCGTACTTTGACACAACCAGTATATAATGCTAATACATCATTGCCTTTTTTATTCTGGAGGAGAATGTTTTTTTTTTTTAACACAACCAGCAGCATTGCCTTC]


>consensus_7170#0 TAAATAGTTAAATTTCCCTTTCGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCC CGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCTGC TGCTTCCGCCGCATCCATCCCTGGTGAGCACATCCTCCGCCACCGCCGCCTGCGCCGATC CCCATCCATCCCGCGAGCGAGCAGGGGCGCCCCTCGTTCGTCCCGCTGCTTCCGCCGCAT CCGTTGCGCACATCCTCTTTCCCATATCTCTCTCTACCCACGCACTTTTTTCTTTATCGA ATTTGCGTTAACCCTAGCTTCTGTTCTGGAAATTTGCCTTAACCTTGATACTGATAACAG TTTGTTTGTTCCCAAAAAGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTG GTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATC ATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGTGCTGCATCTGCTGATGTTGC TACAGCATGTGAAATGTGATATGTTATGCTGCTGTACCTTTTTTTTCGCCCGCAAATTTC ATTAACACCACTTCAGGTTGGCAGGACATGCACTTATGTCTTCAATGAAATTAGAGAGAT TCCAAATTTCTTTTTTTTTCTCTTGGCACCAGACCACTTTATAAGATGTACAACAAGAAG TTTGTTTTATTTTTGGTCTTTTTTCTAACAAATGTATTTGGCATCTATTAACAAAAGTTT GTTTTAACTACTAATAGTGTATTTCCACTTGTAGCAGTGGCGTATGAGTGCTTGCTGAAC ATGTGCCTTTATATATTAACAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGTGC TGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTG GGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTAT ATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTC AATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGA GCAAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCA GTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAA GAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTC TGCTGGGACACCATTTTTGTTGCATCAACACACCAGACCTAAGGAAGAAAAGCCAAAGGT CCCTACTTCTGTGAAGAGAACACTTGCACTTCTAGGTCAGAGGAATCTTGAGACCGAGAA TCCCTTGGAGCATGTAATTGGTGAAACATCTAGCGAGGAGGAAGACGATGCTCAAAACAA CCTGGCTTTGATCAACAAAGATGTCAAGGGGCAAACTATGGCTGACATATTTCAACAAGT ATTTAATGCAACAAGCATGGACTGTTTTACACTGCCCGTGAGATCATATGGATCTGGTTA TTATGGAAGGATGCAACAAATTCTGCAGATGGAGAAAGATAGGCATGCTGAGTTCCTAAG ACAGTATAACAGAGAGCAAGATTATTTAGGCGATCCAAAGGGGGTTACAGTTCAGATTTT GTCAAGGTCTCTGGAAGGAAAGCTAACAATCTGCCGCTGCTTGTTCATGGAGAAGAGCAA TTTGGCCACAACAGGGGAAGTGTCAACAGATCTTGACATGGATAATAGCAGCGTGAAAAG GACCATCATCTTCAGTCCCAAGATATGTGACAACGTGGATCTTCTAGCAGGAAACATTAT TCACATCTTCCCACCATGGAAAGAAGTTAAGGTGAAAGAAGAGACGGTGATTCTTTGCAC CTACTTCTCGCATCGTGGAGTTTGATACTACTTGAGATGCTTCTTTTTTAGATGAATTTA TCATGAGTAAGAGGAAGCAACGATTATGCATGACCGTGTCCTGTGTATGTTGGCGCTCCC GAGTCCCGAGTCACTGCACGACCTGCTGACCTGATAGTTTAGAAGTTAGAACCCTCCTGA TGACCACATGATGTAGCCGAGTTTGTACACAGCGTACTTTGACACAACCAGTATATAATG CTAATACATCATTGCCTTTTTTATTCTGGAGGAGAATGTTTTTTTTTTTTAACACAACCA GCAGCATTGCCTTC



consensusID : consensus_7170#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 808
fasta sequence
                              [CCCTCTTGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCCCGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCCGCTGCTTCCGCCGCATCCATCCCTGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTGGTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATCATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGAGCGAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGGCCTAAGGAAGAAAAGCCAAAGGTCCCTACTTCTGTGAAGAGAACAC]

[+] EMBL CB625017             [CCCTCTTGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCCCGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCCGCTGCTTCCGCCGCATCCATCCCTGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTGGTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATCATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGGGAGCGAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGGCCTAAGGAAGAAAAGCCAAAGGTCCCTACTTCTGTGAAGAGAACAC]


>consensus_7170#1 CCCTCTTGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCCCGGCCGCCGCCGATC CCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCCGCTGCTTCCGCCGCATC CATCCCTGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTGGTATGGAGAGC TTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATCATGTGTCTGAT TCTGCTGAGGATGCAATATCTGATGAGGATGTTCTTGCACCAACAAGACTGTCATTAGCT TGTGCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACC ATCTGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCT AGTATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAA TTCTCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATT GGGGAGCGAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCT GAGCAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCA ACCAAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCC TCCTCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGGCCTAAGGAAGAAAAGCCA AAGGTCCCTACTTCTGTGAAGAGAACAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7170#0      TAAATAGTTAAATTTCCCTTTCGGACCCTCGTCACTCATCGTCGTTTGCCCGGCGCCGCC 60
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      CGGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAGCAGGGGCGCCGTCGTTCGTCCTGC 120
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TGCTTCCGCCGCATCCATCCCTGGTGAGCACATCCTCCGCCACCGCCGCCTGCGCCGATC 180
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      CCCATCCATCCCGCGAGCGAGCAGGGGCGCCCCTCGTTCGTCCCGCTGCTTCCGCCGCAT 240
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      CCGTTGCGCACATCCTCTTTCCCATATCTCTCTCTACCCACGCACTTTTTTCTTTATCGA 300
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      ATTTGCGTTAACCCTAGCTTCTGTTCTGGAAATTTGCCTTAACCTTGATACTGATAACAG 360
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TTTGTTTGTTCCCAAAAAGTTTCCCATGTTAGACCCGCCCATGGACCGGTTCTAGCGTTG 420
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      GTATGGAGAGCTTCCGTGATGATCAGCGCGCTGGTCCTCAATCCGAGCAACACTCTGATC 480
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      ATGTGTCTGATTCTGCTGAGGATGCAATATCTGATGAGGTGCTGCATCTGCTGATGTTGC 540
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TACAGCATGTGAAATGTGATATGTTATGCTGCTGTACCTTTTTTTTCGCCCGCAAATTTC 600
consensus_7170#1      --------------------------CCCTCTTGGACCCTCGTCACTCATCGTCG-TTTG 33
                                                  **  ** *** *  *       **    *** 

consensus_7170#0      ATTAACACCACTTCAGGTTGGCAG-GACATGCACTTATGTCTTCAATGAAATTAGAGAGA 659
consensus_7170#1      CCCGGCGCCGCCC--GGCCGCCGCCGATCCCCATCCATTCCGCTAGCGAG----CAGGGG 87
                           * ** *    **  * *   **    **   **  *   *  **      ** * 

consensus_7170#0      TTCCAAATTTCTTTTTTTTTCTCTTGGCAC-CAGACCACTTTATAAGATGTACAACAAGA 718
consensus_7170#1      CGCCGTCGTTCGTCCCGCTGCTTCCGCCGCATCCATCCCTGTTTCCCATGTTAGACCCGC 147
                        **    *** *     * **   * * *    * * ** * *   ****   **  * 

consensus_7170#0      AGTTTGTTTTATTTTTGGTCTTTTTTCTAACAAATGTATTTGGCATCTATTAACAAAAGT 778
consensus_7170#1      C-CATGGACCGGTTCTAGCGTTGGT----ATGGAGAGCTTCCGTGATGATCAGCGC--GC 200
                          **      ** * *  **  *    *   *    **  *     ** * *    * 

consensus_7170#0      TTGTTTTAACTACTAATAGTGTATTTCCACTTGTAGCAGTGGCGTATGAGTGCTTGCTGA 838
consensus_7170#1      TGGTCCTCAATCCGAGCAA--------CACTCTGATCAT--GTGTCTGATT--CTGCTGA 248
                      * **  * * * * *  *         ****   * **   * ** *** *   ******

consensus_7170#0      ACATGTGCCTTTATATATTAACAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGT 898
consensus_7170#1      GGATGCA-----ATATCTGATGAGGATGTTCTTGCACCAACAAGACTGTCATTAGCTTGT 303
                        ***       **** * *  **************************************

consensus_7170#0      GCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATC 958
consensus_7170#1      GCTGCTTCAAAAGAAAGAGAGAAGGAAAACAAAATGGTGGTGCCAGATGAATCAACCATC 363
                      ************************************************************

consensus_7170#0      TGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGT 1018
consensus_7170#1      TGGGATGAAGTTCTGGAAGAAGCCGATGAGCTAGCCTATGTGCACAAAGTTCCTCCTAGT 423
                      ************************************************************

consensus_7170#0      ATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTC 1078
consensus_7170#1      ATATCATTCCTATCTGCTGGAACAGGCAAAAGGAGAAAAGGTGAACACAGGCTCAAATTC 483
                      ************************************************************

consensus_7170#0      TCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGG 1138
consensus_7170#1      TCAATACGTGGATCCAGTTCTGTTTCACTGAATGTGAAGACTGAAAACCCATACATTGGG 543
                      ************************************************************

consensus_7170#0      GAGCAAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAG 1198
consensus_7170#1      GAGCGAGAAGTTTCATCAGTAATGCCAACAAACAGAGCTCCTGAAACCATGATGGCTGAG 603
                      **** *******************************************************

consensus_7170#0      CAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACC 1258
consensus_7170#1      CAGTTGGAAAATATCAAGGAGGAAACTGAAGATTTGCCCTCAGAGTTTGCTTGTTCAACC 663
                      ************************************************************

consensus_7170#0      AAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCC 1318
consensus_7170#1      AAGAAAGCAAATGTTTCAATTTCTGAACTTCTTGACAGTTTACAGGATAGAAGTGCCTCC 723
                      ************************************************************

consensus_7170#0      TCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGACCTAAGGAAGAAAAGCCAAAG 1378
consensus_7170#1      TCTGCTGGGACACCATTTTTGTTGCATCAACACACCAGGCCTAAGGAAGAAAAGCCAAAG 783
                      ************************************** *********************

consensus_7170#0      GTCCCTACTTCTGTGAAGAGAACACTTGCACTTCTAGGTCAGAGGAATCTTGAGACCGAG 1438
consensus_7170#1      GTCCCTACTTCTGTGAAGAGAACAC----------------------------------- 808
                      *************************                                   

consensus_7170#0      AATCCCTTGGAGCATGTAATTGGTGAAACATCTAGCGAGGAGGAAGACGATGCTCAAAAC 1498
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      AACCTGGCTTTGATCAACAAAGATGTCAAGGGGCAAACTATGGCTGACATATTTCAACAA 1558
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      GTATTTAATGCAACAAGCATGGACTGTTTTACACTGCCCGTGAGATCATATGGATCTGGT 1618
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TATTATGGAAGGATGCAACAAATTCTGCAGATGGAGAAAGATAGGCATGCTGAGTTCCTA 1678
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      AGACAGTATAACAGAGAGCAAGATTATTTAGGCGATCCAAAGGGGGTTACAGTTCAGATT 1738
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TTGTCAAGGTCTCTGGAAGGAAAGCTAACAATCTGCCGCTGCTTGTTCATGGAGAAGAGC 1798
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      AATTTGGCCACAACAGGGGAAGTGTCAACAGATCTTGACATGGATAATAGCAGCGTGAAA 1858
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      AGGACCATCATCTTCAGTCCCAAGATATGTGACAACGTGGATCTTCTAGCAGGAAACATT 1918
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      ATTCACATCTTCCCACCATGGAAAGAAGTTAAGGTGAAAGAAGAGACGGTGATTCTTTGC 1978
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      ACCTACTTCTCGCATCGTGGAGTTTGATACTACTTGAGATGCTTCTTTTTTAGATGAATT 2038
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TATCATGAGTAAGAGGAAGCAACGATTATGCATGACCGTGTCCTGTGTATGTTGGCGCTC 2098
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      CCGAGTCCCGAGTCACTGCACGACCTGCTGACCTGATAGTTTAGAAGTTAGAACCCTCCT 2158
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      GATGACCACATGATGTAGCCGAGTTTGTACACAGCGTACTTTGACACAACCAGTATATAA 2218
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      TGCTAATACATCATTGCCTTTTTTATTCTGGAGGAGAATGTTTTTTTTTTTTAACACAAC 2278
consensus_7170#1      ------------------------------------------------------------
                                                                                  

consensus_7170#0      CAGCAGCATTGCCTTC 2294
consensus_7170#1      ----------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)