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Oryza sativa
cluster # 7171 cluster # 7171       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7171#0 length = 1354 sequences # 4  
consensusID : consensus_7171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1354
fasta sequence 
                              [TCTTTTTTTTACATAATACCCACAGTTACCTTTTGGCTTTTCTATTCTTATTATGGTAGTCTGTTCATTACACTCAAGCAAACACAAATTGTCTCGCAAAGATAGTTCAGTTTGACCAAAGAAACCATGTATGATAGGTATTTTATTTATCTAAGAATGGACAGGTGAGGATTAGCACTAGAAATAATACTTCAAAACCCTAGAGTTCAACAACATAGTAGTATAGTACCTTTAAACATCCAATCAATTTAAGGATGAGTTGACCTGATGCTTCAATATATTGCTTCAAGCCTCCTGTGTTCAACTGCCACAAAATGTTCAGCACATCATTGAAACCACTGTTCACTTCATGGCGATTAATTTGGTCTTCAATGGCATCATAGGATTTGGTTGAGCATCAGGTGAGTTCATCACTTTTCTCGAGTACCATACTACATATAGAGAGAATTAGACATTTTTTGAGCTGTGACTACTTAGTTTTGCCATCTCATTTTTTGAGTTGTGACTACATG-CAGGGTGATTGCTA-CATGCTTTAA-CTGC-AAACTTGGATTCAGAACACTGG-ACAATGAATATTAATTTCTTTCTTCACGAGCTTATTTT-CCAGTGGAGCAGGGGAGACCGTT-CAGATCGCAGAGGATTCTTCTCTCTT-CCCCTCCTGTCCCAAAGGATCATATCTGCAACTGCGCATCATCAACAGGCATGTGATCTTTTACTCAAAAAAAAAAGCATGTGGTCCTGCAAATCTTAATAGCTCATATGTACCTCATCCGGTTACTGAAAAAAAATCTCCGAAAAGATAATTTTTTTTGAACCACTCAAAATAAAATTTAGTAGCAAATATGCCGGTAGCAAGATGCCAAGAAATATACCGAAAGTCATCAAATTCCTAGTTAATGAAATACATAGCTTGGCGTACTAAAACGGAAATTAGCAAGTAGTACCAACCAGCATTAACATACACCACCATGTTCATTTCAAATTTTCAGTGCCTCACTAAGACAGACAATAAAGCTGGGATATCATATTTTGTTCAACAGGCTAAAAGAAAAGGAGCTCTTACCGGTTAATCTTGCATATCCACAAGAAGTAGCACATCAGTCAGTAAGTGAAGACAGACAATGGCAGAGGCAGCAGTAGTCCTAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGAAAGAACCCGCACGGCTCCCAGATCTACCATACACAGGCGTCGTGCGAGCCGAGCCGATGGAGCCTCCGGCGAATCTCCATCGCCGCCGGCACCGTGCTCTGGCTGACCACTCCGCGCCGCCGCCCTCCGCCTCGCCGCCGCCAGAAAAGGGAGA]

[+] EMBL CB656215             [TCTTTTTTTTACATAATACCCACAGTTACCTTTTGGCTTTTCTATTCTTATTATGGTAGTCTGTTCATTACACTCAAGCAAACACAAATTGTCTCGCAAAGATAGTTCAGTTTGACCAAAGAAACCATGTATGATAGGTATTTTATTTATCTAAGAATGGACAGGTGAGGATTAGCACTAGAAATAATACTTCAAAACCCTAGAGTTCAACAACATAGTAGTATAGTACCTTTAAACATCCAATCAATTTAAGGATGAGTTGACCTGATGCTTCAATATATTGCTTCAAGCCTCCTGTGTTCAACTGCCACAAAATGTTCAGCACATCATTGAAACCACTGTTCACTTCATGGCGATTAATTTGGTCTTCAATGGCATCATAGGATTTGGTTGAGCATCAGGTGAGTTCATCACTTTTCTCGAGTACCATACTACATATAGAGAGAATTAGACATTTTTTGAGCTGTGACTACTTAGTTTTGCCATCTCATTTTTTGAGTTGTGACTACATG CAGGGTGATTGCTA CATGCTTTAA CTGC AAACTTGGGTTCAGAACACTGG ACAATGAATATTAATTTCTTTCTTCACGAGCTTATTTT CCAGTGGAGCAGGGGAGACCGTT CAGATCGCAGAGGATTCTTCTCTCTT CCCCTCCTGTCCCAAAGGATCATATCTGCAACTGCGCATCATCAACAGGCATGTGATCTTTTACTCAAAAAAAAAAGCATGTGGTCCTGCAAATCTTAATAGCTCATATGTACCTCATCCGGTTACTGAAAAAAAATCTCCGAAAAGATAATTTTTTTTGAACCACTCAAAATAAAATTTAGTAGCAAATATGCCGGTAGCAAGATGCCAAGAAATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA760842             [ttTTTTTTTTTTTTAATACCCACAGTTACCTTTTGGCTTTTATATTCTTATTATGGTAGTCTGTTCATTACACTCAAGCAAACACAAATTGTCTCGCAAAGATAGTTCAGTTTGACCAAAGAAACCATGTATGATAGGTATTTTATTTATCTAAAAATGGATAGGTGAGGATTAGCACTAGAAATAATACTTCAAAACCCTAGAGTTCAACAACATAGTAGTATAGTACCTTTAAACATCCAATCAATTTAAGGATGAGTTGACCTGATGCTTCTATATATTGCTTCAAGCCTCCTGTGTTCAACTGCCACAAAATGTTCAGCACATCATTGAAACCACTGTTCACTTCATGGCGATTAATTTGGTCTTCAATGGCATCATAGGATTTGGTTGAGCATCAGGTGAGTTCATCACTTTTCTCGAGTACCATACTACATATAGAGAGAATTAGACATTTTTTGAGCTGTGACTACTTAGTTTTGCCATCTCATTTTTTGAGCTGTGACTACATG CAGGGTGATTGCTA CATGCTTTAA CTGC AAACTTGGATTCAGAACACTGG ACAATGAATATTAATTTCTTTCTTCACGAGCTTATTTT CCAGTGGAGCAGGGGAGACCGTT CAGATCGCAAATGATTCTTCTCTCTT CCCCTtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CA764713             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gnCTNCATGCCAGGGTGATTGCTACCATGCTTTAACCTGCAAAACCTGGATTCAGACCCCTGGCCCAATGAATATTAATTTCTTTCTTCNCGAGCTTATTTTCCCAGTGGAGCAGGGGAGNCCGTTCCAGATCGCAGATGATTCTTCTCTCTTCCCCCTCCTGTCCCAAAGGATCATATCTGCAACTGCGCAACATCAACAGGCATGTGATCTTTTACTC AAAAAAAAAGCATGTGGTCCTGCAAATCTTAATAGCTCATATGTACCTCATCCGGTTACTGAAAAAAAATCTCCGAAAAGATATTTTTTTTTGAACCACTCAAAATAAAATTTAGTAGCAAATATGCCGGTAGCAAGATGCCAAGAAATATACCGAAAGTCATCAAATTCCTAGTTAATGAAATACATAGCTTGGCGTACTAAAACGGAAATTAGCAAGTAGTACCAACCAGCATTAACATACACCACCATGTTCATTTCAAATTTTCAGTGCCTCACTAAGACAGACAATAAAGCTGGGATATCATATTTTGTTCAACAGGCTAAAAGAAAAGGAGCTCTTACCGGTTAATCTTGCATATCCACAAGAAGTAGCACATCAGTCAGTAAGTGAAGACAGACAATGGCAGAGGCAGCAGTAGTCCTAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGAAAGAACCCGCACGGCTCCCAGATCTACCATACACAGGCGTCGTGCGAGCCGAGCCGATGGAGCCTCCGGCGAATCTCCATCGCCGCCGGCACCGTGCTCTGGCTGACCACTC                                          ]
[-] EMBL CB656214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCGTT CAGATCGCAGAGGATTCTTCTCTCTT CCCCTCCTGTCCCAAAGGATCATATCTGCAACTGCGCATCATCAACAGGCATGTGATCTTTTACTCAAAAAAAAAAGCATGTGGTCCTGCAAATCTTAATAGCTCATATGTACCTCATCCGGTTACTGAAAAAAAATCTCCGAAAAGATAATTTTTTTTGAACCACTCAAAATAAAATTTAGTAGCAAATATGCCGGTAGCAAGATGCCAAGAAATATACCGAAAGTCATCAAATTCCTAGTTAATGAAATACATAGCTTGGCGTACTAAAACGGAAATTAGCAAGTAGTACCAACCAGCATTAACATACACCACCATGTTCATTTCAAATTTTCAGTGCCTCACTAAGACAGACAATAAAGCTGGGATATCATATTTTGTTCAACAGGCTAAAAGAAAAGGAGCTCTTACCGGTTAATCTTGCATATCCACAAGAAGTAACACATCAGTCAGTAAGTGAAGACAGACAATGGCAGAGGCAGCAGTAGTCCTAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGAAAGAACCCGCACGGCTCCCAGATCTACCATACACAGGCGTCGTGCGAGCCGAGCCGATGGAGCCTCCGGCGAATCTCCATCGCCGCCGGCACCGTGCTCTGGCTGACCACTTCGCGCCGCCGCCCTCCGCCTCGCCGCCGCCAGAAAAGGGAGA]




>consensus_7171#0
TCTTTTTTTTACATAATACCCACAGTTACCTTTTGGCTTTTCTATTCTTATTATGGTAGT
CTGTTCATTACACTCAAGCAAACACAAATTGTCTCGCAAAGATAGTTCAGTTTGACCAAA
GAAACCATGTATGATAGGTATTTTATTTATCTAAGAATGGACAGGTGAGGATTAGCACTA
GAAATAATACTTCAAAACCCTAGAGTTCAACAACATAGTAGTATAGTACCTTTAAACATC
CAATCAATTTAAGGATGAGTTGACCTGATGCTTCAATATATTGCTTCAAGCCTCCTGTGT
TCAACTGCCACAAAATGTTCAGCACATCATTGAAACCACTGTTCACTTCATGGCGATTAA
TTTGGTCTTCAATGGCATCATAGGATTTGGTTGAGCATCAGGTGAGTTCATCACTTTTCT
CGAGTACCATACTACATATAGAGAGAATTAGACATTTTTTGAGCTGTGACTACTTAGTTT
TGCCATCTCATTTTTTGAGTTGTGACTACATGCAGGGTGATTGCTACATGCTTTAACTGC
AAACTTGGATTCAGAACACTGGACAATGAATATTAATTTCTTTCTTCACGAGCTTATTTT
CCAGTGGAGCAGGGGAGACCGTTCAGATCGCAGAGGATTCTTCTCTCTTCCCCTCCTGTC
CCAAAGGATCATATCTGCAACTGCGCATCATCAACAGGCATGTGATCTTTTACTCAAAAA
AAAAAGCATGTGGTCCTGCAAATCTTAATAGCTCATATGTACCTCATCCGGTTACTGAAA
AAAAATCTCCGAAAAGATAATTTTTTTTGAACCACTCAAAATAAAATTTAGTAGCAAATA
TGCCGGTAGCAAGATGCCAAGAAATATACCGAAAGTCATCAAATTCCTAGTTAATGAAAT
ACATAGCTTGGCGTACTAAAACGGAAATTAGCAAGTAGTACCAACCAGCATTAACATACA
CCACCATGTTCATTTCAAATTTTCAGTGCCTCACTAAGACAGACAATAAAGCTGGGATAT
CATATTTTGTTCAACAGGCTAAAAGAAAAGGAGCTCTTACCGGTTAATCTTGCATATCCA
CAAGAAGTAGCACATCAGTCAGTAAGTGAAGACAGACAATGGCAGAGGCAGCAGTAGTCC
TAGCTCTCGGCAAGCTTGTTACCTCTTTTGGAGTATCATCACTAAGGACTTACCTAGAGA
AAGAACCCGCACGGCTCCCAGATCTACCATACACAGGCGTCGTGCGAGCCGAGCCGATGG
AGCCTCCGGCGAATCTCCATCGCCGCCGGCACCGTGCTCTGGCTGACCACTCCGCGCCGC
CGCCCTCCGCCTCGCCGCCGCCAGAAAAGGGAGA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)