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Oryza sativa
cluster # 7188 cluster # 7188       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7188#0 length = 2037 sequences # 4  

consensusID : consensus_7188#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2037
fasta sequence
                              [CCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTTCAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCCGGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATCAAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGACGGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCATCAACGGGCAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCCACGCTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGCCCTTCACCGAGCCGCACAAGGACGTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACCCTGAGGCGATCGTCGCGCAGGCGCTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCTACACCATCAACGGGCTTCCCGGCCCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGCTCAAGGTGCAGCCCGGAAAGATGTACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACGAGCTCTTCTTCTCGGTGGCCAACCACACGCTCACCGTCGTCGACGTGGACGCCTCCTACGTCAAGCCGTTCGACACGGACGTGGTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGCTCCGCGCCAAGCCGACGGCCGAGGCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCTACGCCACGGGCCGCCCCGGCACCTACGACAACACCACCGTTGCCGCCGTCCTGGAGTACGCGCCACCGGGGCACATCAAGAGCCTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACGACACGGCCTTCGCCGCCGGCTTCGCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACCCGTCCAACGTGCCGCGCCGCGTCGACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCACCCCGTGCCCGGGCAGCAACAACCAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCACGGCGTCCATCAACAACGTCTCCTTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACTACACCGGCCAGTCCGCCGGCGTGTACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGTTCAACTACACGGGCACGCCGCCCAACAACACCAACGTGTCGAACGGGACCAGGGTGGTGGTGCTGCCGTACAACGCGAGCGTGGAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCGAGAGCCACCCGCTGCACCTCCACGGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCAACTACGACCCGTCCAAGCACCCGGCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACACCGTCGGCGTGCCGGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATGCATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGACGGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAGAGATCGATCAATCGTTGACATTATTTGACCAAGGCTGTGATTCGTTTATTCCGTTTGGTTTGCTACACATAATTTGTCAATGGATAATGCCGTACGTACATACCTGCAGGATTGAGGTCTTGTTTTCCATTCTTCCAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATTGTTTTTTTTTTAAATTCTACAAGTACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAATAAGAATAGTTTGACTCTTACATTTTGACACCCACGATGGGCTCAATCTCAGATGACTATATTACGGACTAGTATTTTACAAGCGCGAACTATGTATGATACTGGACTGTTACAACAAGAATTCATATAAGATCATATAAG]

[+] EMBL AK072397             [CCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTTCAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCCGGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATCAAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGACGGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCATCAACGGGCAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCCACGCTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGCCCTTCACCGAGCCGCACAAGGACGTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACCCTGAGGCGATCGTCGCGCAGGCGCTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCTACACCATCAACGGGCTTCCCGGCCCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGCTCAAGGTGCAGCCCGGAAAGATGTACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACGAGCTCTTCTTCTCGGTGGCCAACCACACGCTCACCGTCGTCGACGTGGACGCCTCCTACGTCAAGCCGTTCGACACGGACGTGGTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGCTCCGCGCCAAGCCGACGGCCGAGGCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCTACGCCACGGGCCGCCCCGGCACCTACGACAACACCACCGTTGCCGCCGTCCTGGAGTACGCGCCACCGGGGCACATCAAGAGCCTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACGACACGGCCTTCGCCGCCGGCTTCGCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACCCGTCCAACGTGCCGCGCCGCGTCGACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCACCCCGTGCCCGGGCAGCAACAACCAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCACGGCGTCCATCAACAACGTCTCCTTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACTACACCGGCCAGTCCGCCGGCGTGTACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGTTCAACTACACGGGCACGCCGCCCAACAACACCAACGTGTCGAACGGGACCAGGGTGGTGGTGCTGCCGTACAACGCGAGCGTGGAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCGAGAGCCACCCGCTGCACCTCCACGGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCAACTACGACCCGTCCAAGCACCCGGCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACACCGTCGGCGTGCCGGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATGCATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGACGGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAGAGATCGATCAATCGTTGACATTATTTGACCAAGGCTGTGATTCGTTTATTCCGTTTGGTTTGCTACACATAATTTGTCAATGGATAATGCCGTACGTACATACCTGCAGGATTGAGGTCTTGTTTTCCATTCTTCCAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATTGTTTTTTTTTTAAATTCTACAAGTACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAATAAGAATAGTTTGACTCTTACATTTTGACACCCACGATGGGCTCAATCTCAGATGACTATATTACGGACTAGTATTTTACAAGCGCGAACTATGTATGATACTGGACTGTTACAACAAGAATTCATATAAGATCATATAAG]
[+] EMBL AK060579             [CCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTTCAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCCGGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATCAAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGACGGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCATCAACGGGCAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCCACGCTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGCCCTTCACCGAGCCGCACAAGGACGTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACCCTGAGGCGATCGTCGCGCAGGCGCTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCTACACCATCAACGGGCTTCCCGGCCCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGCTCAAGGTGCAGCCCGGAAAGATGTACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACGAGCTCTTCTTCTCGGTGGCCAACCACACGCTCACCGTCGTCGACGTGGACGCCTCCTACGTCAAGCCGTTCGACACGGACGTGGTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGCTCCGCGCCAAGCCGACGGCCGAGGCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCTACGCCACGGGCCGCCCCGGCACCTACGACAACACCACCGTTGCCGCCGTCCTGGAGTACGCGCCACCGGGGCACATCAAGAGCCTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACGACACGGCCTTCGCCGCCGGCTTCGCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACCCGTCCAACGTGCCGCGCCGCGTCGACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCACCCCGTGCCCGGGCAGCAACAACCAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCACGGCGTCCATCAACAACGTCTCCTTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACTACACCGGCCAGTCCGCCGGCGTGTACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGTTCAACTACACGGGCACGCCGCCCAACAACACCAACGTGTCGAACGGGACCAGGGTGGTGGTGCTGCCGTACAACGCGAGCGTGGAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCGAGAGCCACCCGCTGCACCTCCACGGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCAACTACGACCCGTCCAAGCACCCGGCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACACCGTCGGCGTGCCGGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATGCATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGACGGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAGAGATCGATCAATCGTTGACATTATTTGACCAAGGCTGTGATTCGTTTATTCCGTTTGGTTTGCTACACATAATTTGTCAATGGATAATGCCGTACGTACATACCTGCAGGATTGAGGTCTTGTTTTCCATTCTTCCAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATTGTTTTTTTTTTAAATTCTACAAGTACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAATAAGAATAGTTTGACTC                                                                                                                            ]
[+] EMBL C72442               [CCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTTCAGAATGTGACACGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCCGGGCCGAAAATAGTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATCAAGGACAACATTACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGACGGGCCGGCGTACGTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCATCAACGGGCAGAGGGGCA CCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCCACGCTGTACGG CCCATCATCATCCTCCCCAANGCCGGCCT CCGTTGCCCTTCANCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU172506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCCGGCGGCTGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATGCATTGCCACCTGGAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGACGGCCCGTTGCCTGAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAGAGATCGATCAATCGTTGACATTATTTGACCAAGGCTGTGATTCGTTTATTCCGTTTGGTTTGCTACACATAATTTGTCAATGGATAATGCCGTACGTACATACCTGCAGGATTGAGGTCTTGTTTTCCATTCTTCCAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATTGTTTTTTTTTTAAATTCTACAAGTACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAATAAGAATAGTTTGACTCTTACATTTTGACAaaaa                                                                                                           ]


>consensus_7188#0 CCGCTCGCCGGCGCGGCGACGAGATACTACACCTTCAATGTGAAGCTTCAGAATGTGACA CGGCTGTGCAACACCCGGGCAATCCCGACGGTGAACGGCAAGTTCCCCGGGCCGAAAATA GTCACCAGGGAGGGAGACCGCGTCGTCGTCAAGGTGGTCAACAATATCAAGGACAACATT ACCATCCACTGGCACGGGGTGAGGCAGATGCGGACGGGGTGGTCGGACGGGCCGGCGTAC GTGACGCAGTGCCCGATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCATCAACGGG CAGAGGGGCACCCTGTTCTGGCACGCGCACGTCTCCTGGCTGCGATCCACGCTGTACGGC CCCATCATCATCCTCCCCAAGGCCGGCCTCCCGTTGCCCTTCACCGAGCCGCACAAGGAC GTGCCCATCATCTTCGGAGAGTGGTTTAACGCGGACCCTGAGGCGATCGTCGCGCAGGCG CTTCAGACCGGCGGTGGGCCCAACGTCTCCGACGCCTACACCATCAACGGGCTTCCCGGC CCATTGTACAACTGCTCAAGCAAAGACACGTTTAGGCTCAAGGTGCAGCCCGGAAAGATG TACCTGCTCCGGCTGATCAACGCTGCGCTCAACGACGAGCTCTTCTTCTCGGTGGCCAAC CACACGCTCACCGTCGTCGACGTGGACGCCTCCTACGTCAAGCCGTTCGACACGGACGTG GTCCTCATCACGCCGGGGCAGACCACCAACGTGCTGCTCCGCGCCAAGCCGACGGCCGAG GCCGCCGGCGCCACGCACCTCATGATGGCGCGCCCCTACGCCACGGGCCGCCCCGGCACC TACGACAACACCACCGTTGCCGCCGTCCTGGAGTACGCGCCACCGGGGCACATCAAGAGC CTCCCGCTCCTCCGCCCGTCGCTGCCGGCGCTCAACGACACGGCCTTCGCCGCCGGCTTC GCCGCCAAGCTCCGCAGCCTGGCCTGCCCGGACTACCCGTCCAACGTGCCGCGCCGCGTC GACAAGCCCTTCTTCTTCGCCGTGGGGCTCGGCACCACCCCGTGCCCGGGCAGCAACAAC CAGACGTGCCAGGGCCCCACCAACACCACCAAGTTCACGGCGTCCATCAACAACGTCTCC TTCGACATGCCCACCACCGCGCTCCTGCAGGCGCACTACACCGGCCAGTCCGCCGGCGTG TACACCGCCGACTTCCCCGCCTCGCCGCTGGAGCCGTTCAACTACACGGGCACGCCGCCC AACAACACCAACGTGTCGAACGGGACCAGGGTGGTGGTGCTGCCGTACAACGCGAGCGTG GAGGTGGTGCTGCAGGACACCAGCATCCTGGGCGCCGAGAGCCACCCGCTGCACCTCCAC GGCTTCGACTTCTTCGTCGTCGGGCAGGGCACCGGCAACTACGACCCGTCCAAGCACCCG GCGGAGTTCAACCTGGTCGACCCGGTGCAGAGGAACACCGTCGGCGTGCCGGCCGGCGGC TGGGTCGCCATCAGGTTCTTCGCGGATAACCCTGGTGTCTGGTTCATGCATTGCCACCTG GAGGTTCACACAACCTGGGGGTTGAAGATGGCATGGGTGGTCAACGACGGCCCGTTGCCT GAGCAGAAGCTGATGCCTCCGCCGTCCGATCTTCCCATGTGCTAGAGATCGATCAATCGT TGACATTATTTGACCAAGGCTGTGATTCGTTTATTCCGTTTGGTTTGCTACACATAATTT GTCAATGGATAATGCCGTACGTACATACCTGCAGGATTGAGGTCTTGTTTTCCATTCTTC CAAAGGTGTTGTTTATTCTTGTAAGGGGTTTGCCATTGTTTTTTTTTTAAATTCTACAAG TACTTTTAGCTCGAAAGTTCGGCCGTATATGGTCAATAAGAATAGTTTGACTCTTACATT TTGACACCCACGATGGGCTCAATCTCAGATGACTATATTACGGACTAGTATTTTACAAGC GCGAACTATGTATGATACTGGACTGTTACAACAAGAATTCATATAAGATCATATAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)