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Oryza sativa
cluster # 7203 cluster # 7203       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7203#0 length = 1785 sequences # 1  
consensus_7203#1 length = 1701 sequences # 3  

consensusID : consensus_7203#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1785
fasta sequence
                              [TATTTTTCCAGCGCCTTGCATGCCGTGTTCTTCTCGCCGCGGGAGGAGATCGTCACCCCGCGGCGTCGTCGTCGGCGTCGGCGGCGGCGCGCGGGGGTCGGCACGAGGGTGCTCGCCCACTCTCGCGTCGATCCGGCGATGGGGCTGCTGAGCTCGGCGAGCAGGTCGTGCTGCTGCTGCTCCTGGGTGCGCGGCGGCTGCGCCAGCTGCTGCTCGTGGATCCGCGGCTTCTGCGGCGGCGGCGGGGGGGCGACGACGTCGGCGCAGGACACGGCGGCGTCGGACGCGAAGAAGAGGAAGAAGCGGAAGTGGGTGGTGCGCGGCGTCTTCGGCAAGGCCGCGCGGGAGGCGGAGGAGCCGCTGACGCTGGAGACGATGAAGAAGAGGAAGAGCGCCGCGACGAGCCCGGAGCTGGAGAAGAACAAGTGGGGGACCAAGAAGAATTGGAAGAAGAAGAAGGGCAAGACCCAACCGACCGGCTTGGCCAGCCTCGTCAAGGAGATCTCCCTCGAGAATAGTACCAGGAACAGGGCAGCGGCAGGAGAGATACTACGGATCGGCAACCACAACATTCCAAGCAGAGTATTCACGTTCCGTCAGCTGGCCGATGCAACCGGCTCTTTCAGCCCGGAAAACCTGCTTGGTGAGGGTGGATTCGGGAGAGTCTACAAAGGATTCATCCCAGACACCAAGGAAGTCATAGCGGTTAAGCAGCTGGACAAGGATGGATTGCAGGGGAACCGCGAGTTCCTCGTCGAGGTGCTGATGCTTAGCCTTCTCCATCACCCCAACCTCGTCACCTTGCTCGGTTACAGCACCGAGTGCGACCAGAGAATCCTGGTCTACGAGTACATGCCACTCGGTTCATTGCAAGATCATCTCCTAGATCTGACACCGAACTCGTCGCCGCTGTCATGGCACACGCGGATGAAGATCGCGGTGGGCGCGGCGAGAGGGATGGAGTACCTGCACGAGATAGCCAACCCGCCGGTGATCTACCGGGATCTCAAGGCGTCCAACATCCTCCTCGACGGCGGGTTCAACGCGAAGCTGTCGGATTTCGGGCTGGCGAAGCTGGGCCCCGTCGGCGACAAGAGCCACGTCACCACCAGGGTGATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGATGTCCGACATCTACAGCTTCGGCGTCGTCCTCCTCGAGATCATCACCGGCCGCCGAGCCATCGACACCACCAAGCCCACTCGCGAGCAGATTCTTGTTCACTGGGCAGCGCCACTGTTCAGGGACAAGAAGAAGTTCGTGAAGATGGCTGATCCACTGCTGGACATGAAGTTCCCACTGAAAGGGCTGTACCAGGCACTGGCAATCTCATCGATGTGCTTGCAAGAAGAGGCGAGCAGCCGGCCTCTGATCAGCGACGTGGTGACGGCGCTCACGTTTCTAGCTGACCCAAACTATGATCCTCCTGATGACGTTGAGCCTCTGCCGATCAAAGCCCCGAATTTAGACAGAGAGAGTAGCCAGAAAGAAGCTGAAGGAGGTGACAACGACAGCGACGAGGGTGGTGAAGAGCAGGTTTAGGGGGAACAACAAGAAGTAGCTGAAAATGGCTTCTGGGGAGGGAGTTGGAACATAGAGATGATTAATCAACCATGATTAGATGTGGTTAGAGCTGCAAAATTAATATCACTCACCCTCTCCTTTCTCCTTTCAAAATATCACTCACCCTGTTTTTGATGTATAGCACCTATAGGAAAGAATTAACAACAGGTT]

[+] EMBL AK071077             [TATTTTTCCAGCGCCTTGCATGCCGTGTTCTTCTCGCCGCGGGAGGAGATCGTCACCCCGCGGCGTCGTCGTCGGCGTCGGCGGCGGCGCGCGGGGGTCGGCACGAGGGTGCTCGCCCACTCTCGCGTCGATCCGGCGATGGGGCTGCTGAGCTCGGCGAGCAGGTCGTGCTGCTGCTGCTCCTGGGTGCGCGGCGGCTGCGCCAGCTGCTGCTCGTGGATCCGCGGCTTCTGCGGCGGCGGCGGGGGGGCGACGACGTCGGCGCAGGACACGGCGGCGTCGGACGCGAAGAAGAGGAAGAAGCGGAAGTGGGTGGTGCGCGGCGTCTTCGGCAAGGCCGCGCGGGAGGCGGAGGAGCCGCTGACGCTGGAGACGATGAAGAAGAGGAAGAGCGCCGCGACGAGCCCGGAGCTGGAGAAGAACAAGTGGGGGACCAAGAAGAATTGGAAGAAGAAGAAGGGCAAGACCCAACCGACCGGCTTGGCCAGCCTCGTCAAGGAGATCTCCCTCGAGAATAGTACCAGGAACAGGGCAGCGGCAGGAGAGATACTACGGATCGGCAACCACAACATTCCAAGCAGAGTATTCACGTTCCGTCAGCTGGCCGATGCAACCGGCTCTTTCAGCCCGGAAAACCTGCTTGGTGAGGGTGGATTCGGGAGAGTCTACAAAGGATTCATCCCAGACACCAAGGAAGTCATAGCGGTTAAGCAGCTGGACAAGGATGGATTGCAGGGGAACCGCGAGTTCCTCGTCGAGGTGCTGATGCTTAGCCTTCTCCATCACCCCAACCTCGTCACCTTGCTCGGTTACAGCACCGAGTGCGACCAGAGAATCCTGGTCTACGAGTACATGCCACTCGGTTCATTGCAAGATCATCTCCTAGATCTGACACCGAACTCGTCGCCGCTGTCATGGCACACGCGGATGAAGATCGCGGTGGGCGCGGCGAGAGGGATGGAGTACCTGCACGAGATAGCCAACCCGCCGGTGATCTACCGGGATCTCAAGGCGTCCAACATCCTCCTCGACGGCGGGTTCAACGCGAAGCTGTCGGATTTCGGGCTGGCGAAGCTGGGCCCCGTCGGCGACAAGAGCCACGTCACCACCAGGGTGATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGATGTCCGACATCTACAGCTTCGGCGTCGTCCTCCTCGAGATCATCACCGGCCGCCGAGCCATCGACACCACCAAGCCCACTCGCGAGCAGATTCTTGTTCACTGGGCAGCGCCACTGTTCAGGGACAAGAAGAAGTTCGTGAAGATGGCTGATCCACTGCTGGACATGAAGTTCCCACTGAAAGGGCTGTACCAGGCACTGGCAATCTCATCGATGTGCTTGCAAGAAGAGGCGAGCAGCCGGCCTCTGATCAGCGACGTGGTGACGGCGCTCACGTTTCTAGCTGACCCAAACTATGATCCTCCTGATGACGTTGAGCCTCTGCCGATCAAAGCCCCGAATTTAGACAGAGAGAGTAGCCAGAAAGAAGCTGAAGGAGGTGACAACGACAGCGACGAGGGTGGTGAAGAGCAGGTTTAGGGGGAACAACAAGAAGTAGCTGAAAATGGCTTCTGGGGAGGGAGTTGGAACATAGAGATGATTAATCAACCATGATTAGATGTGGTTAGAGCTGCAAAATTAATATCACTCACCCTCTCCTTTCTCCTTTCAAAATATCACTCACCCTGTTTTTGATGTATAGCACCTATAGGAAAGAATTAACAACAGGTT]


>consensus_7203#0 TATTTTTCCAGCGCCTTGCATGCCGTGTTCTTCTCGCCGCGGGAGGAGATCGTCACCCCG CGGCGTCGTCGTCGGCGTCGGCGGCGGCGCGCGGGGGTCGGCACGAGGGTGCTCGCCCAC TCTCGCGTCGATCCGGCGATGGGGCTGCTGAGCTCGGCGAGCAGGTCGTGCTGCTGCTGC TCCTGGGTGCGCGGCGGCTGCGCCAGCTGCTGCTCGTGGATCCGCGGCTTCTGCGGCGGC GGCGGGGGGGCGACGACGTCGGCGCAGGACACGGCGGCGTCGGACGCGAAGAAGAGGAAG AAGCGGAAGTGGGTGGTGCGCGGCGTCTTCGGCAAGGCCGCGCGGGAGGCGGAGGAGCCG CTGACGCTGGAGACGATGAAGAAGAGGAAGAGCGCCGCGACGAGCCCGGAGCTGGAGAAG AACAAGTGGGGGACCAAGAAGAATTGGAAGAAGAAGAAGGGCAAGACCCAACCGACCGGC TTGGCCAGCCTCGTCAAGGAGATCTCCCTCGAGAATAGTACCAGGAACAGGGCAGCGGCA GGAGAGATACTACGGATCGGCAACCACAACATTCCAAGCAGAGTATTCACGTTCCGTCAG CTGGCCGATGCAACCGGCTCTTTCAGCCCGGAAAACCTGCTTGGTGAGGGTGGATTCGGG AGAGTCTACAAAGGATTCATCCCAGACACCAAGGAAGTCATAGCGGTTAAGCAGCTGGAC AAGGATGGATTGCAGGGGAACCGCGAGTTCCTCGTCGAGGTGCTGATGCTTAGCCTTCTC CATCACCCCAACCTCGTCACCTTGCTCGGTTACAGCACCGAGTGCGACCAGAGAATCCTG GTCTACGAGTACATGCCACTCGGTTCATTGCAAGATCATCTCCTAGATCTGACACCGAAC TCGTCGCCGCTGTCATGGCACACGCGGATGAAGATCGCGGTGGGCGCGGCGAGAGGGATG GAGTACCTGCACGAGATAGCCAACCCGCCGGTGATCTACCGGGATCTCAAGGCGTCCAAC ATCCTCCTCGACGGCGGGTTCAACGCGAAGCTGTCGGATTTCGGGCTGGCGAAGCTGGGC CCCGTCGGCGACAAGAGCCACGTCACCACCAGGGTGATGGGCACGTACGGCTACTGCGCC CCCGAGTACGCCATGACCGGCAAGCTCACCAAGATGTCCGACATCTACAGCTTCGGCGTC GTCCTCCTCGAGATCATCACCGGCCGCCGAGCCATCGACACCACCAAGCCCACTCGCGAG CAGATTCTTGTTCACTGGGCAGCGCCACTGTTCAGGGACAAGAAGAAGTTCGTGAAGATG GCTGATCCACTGCTGGACATGAAGTTCCCACTGAAAGGGCTGTACCAGGCACTGGCAATC TCATCGATGTGCTTGCAAGAAGAGGCGAGCAGCCGGCCTCTGATCAGCGACGTGGTGACG GCGCTCACGTTTCTAGCTGACCCAAACTATGATCCTCCTGATGACGTTGAGCCTCTGCCG ATCAAAGCCCCGAATTTAGACAGAGAGAGTAGCCAGAAAGAAGCTGAAGGAGGTGACAAC GACAGCGACGAGGGTGGTGAAGAGCAGGTTTAGGGGGAACAACAAGAAGTAGCTGAAAAT GGCTTCTGGGGAGGGAGTTGGAACATAGAGATGATTAATCAACCATGATTAGATGTGGTT AGAGCTGCAAAATTAATATCACTCACCCTCTCCTTTCTCCTTTCAAAATATCACTCACCC TGTTTTTGATGTATAGCACCTATAGGAAAGAATTAACAACAGGTT



consensusID : consensus_7203#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1701
fasta sequence
                              [GCTCGAGGGTGTTTCCCCACTCTCGCGTCGATTCGCGCGATGGACCTGTTGACATCGGCGATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGCGGCCGCACCTGTCGCTGCTCGTCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAGGAGGAAGCGTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTAC-GGCGACGCCGCCGCCACCGAGCACGGCAGCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATTCTACGGATCACCCACCAGAACATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAACGCCACCGACTCCTTCAGCCCGAACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTACAGA-GCCACCTCGAAGAGATCAACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGGTTCCAGGGGAACCGCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCCAACCTCGTCAAGCTGCTCGGCTACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAGTGCATGCGGAACGGCTCGCTGGAGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCTCTCCCGTGGCAAACGCGGATGAAGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTGCACGAGGTGGCCAACCCGCCGGTGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTGGACGAGGACTTCAACTCCAAGCTGTCCGACTTCGGCCTCGCCAAGCTCGGCCCCGTCGGCGACAAGAGCCACGTCAGCACGCGGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTGGAGATCATCACCGGCAGGCGGGCGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTCGTCCAATGGGCGGCACCTCTCGTCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCGTTGCTGGAAGAGAAATTCCCCCTCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATGTGCTTGCAGGAGGATGCCAGCAACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCGTTTCTTGCCGAGCAGAAGTATCATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGCAGAGACAGGGACTGTAGCAATCCTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCAGATGATGAAATCGAGCACAGGTGACCATAGAGGAGTAACAGCCTAGCAGGGAAGGGAGGAGCTGCAGGACTGTCTGCTCTCTTGAATTTCTTGTGTAATGTACACCACCTAGGCAGGATGTAACAGCAACAAGTCGATGTTGACTGGTACTTGGTCTGTTCGTCAGGATTCATTACCAGGTTATTGGAGCTCGCAGGACTGTCTGCTCTCTTGCAGTCCCAAGTTATTGGAGCTAACTATAGATACGATGAGAATGACAAGAATGATGACATTACCATAAGCC]

[+] EMBL AK070450             [GCTCGAGGGTGTTTCCCCACTCTCGCGTCGATTCGCGCGATGGACCTGTTGACATCGGCGATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGCGGCCGCACCTGTCGCTGCTCGTCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAGGAGGAAGCGTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTAC GGCGACGCCGCCGCCACCGAGCACGGCAGCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATTCTACGGATCACCCACCAGAACATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAACGCCACCGACTCCTTCAGCCCGAACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTACAGA GCCACCTCGAAGAGATCAACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGGTTCCAGGGGAACCGCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCCAACCTCGTCAAGCTGCTCGGCTACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAGTGCATGCGGAACGGCTCGCTGGAGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCTCTCCCGTGGCAAACGCGGATGAAGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTGCACGAGGTGGCCAACCCGCCGGTGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTGGACGAGGACTTCAACTCCAAGCTGTCCGACTTCGGCCTCGCCAAGCTCGGCCCCGTCGGCGACAAGAGCCACGTCAGCACGCGGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTGGAGATCATCACCGGCAGGCGGGCGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTCGTCCAATGGGCGGCACCTCTCGTCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCGTTGCTGGAAGAGAAATTCCCCCTCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATGTGCTTGCAGGAGGATGCCAGCAACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCGTTTCTTGCCGAGCAGAAGTATCATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGCAGAGACAGGGACTGTAGCAATCCTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCAGATGATGAAATCGAGCACAGGTGACCATAGAGGAGTAACAGCCTAGCAGGGAAGGGAGGAGCTGCAGGACTGTCTGCTCTCTTGAATTTCTTGTGTAATGTACACCACCTAGGCAGGATGTAACAGCAACAAGTCGATGTTGACTGGTACTTGGTCTGTTCGTCAGGATTCATTACCAGGTTATTGGAGCTCGCAGGACTGTCTGCTCTCTTGCAGTCCCAAGTTATTGGAGCTAACTATAGATACGATGAGAATGACAAGAATGATGACATTACCATAAGCC]
[+] EMBL AK100639             [GCTCGAGGGTGTTTCCCCACTCTCGCGTCGATTCGCGCGATGGACCTGTTGACATCGGCGATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGCGGCCGCACCTGTCGCTGCTCGTCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAGGAGGAAGCGTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTAC GGCGACGCCGCCGCCACCGAGCACGGCAGCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATTCTACGGATCACCCACCAGAACATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAACGCCACCGACTCCTTCAGCCCGAACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTACAGAGGCCACCTCGAAGAGATCAACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGGTTCCAGGGGAACCGCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCCAACCTCGTCAAGCTGCTCGGCTACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAGTGCATGCGGAACGGCTCGCTGGAGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCTCTCCCGTGGCAAACGCGGATGAAGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTGCACGAGGTGGCCAACCCGCCGGTGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTGGACGAGGACTTCAACTCCAAGCTGTCCGACTTCGGCCTAGCCAAGCTCGGCCCCGTCGGCGACAAGAGCCACGTCAGCACGCGGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTGGAGATCATCACCGGCAGGCGGGCGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTCGTCCAATGGGCGGCACCTCTCGTCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCGTTGCTGGAAGAGAAATTCCCCCTCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATGTGCTTGCAGGAGGATGCCAGCAACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCGTTTCTTGCCGAGCAGAAGTATCATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGCAGAGACAGGGACTGTAGCAATCCTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCAGATGATGAAATCAAGCACAGGTGACCATAGAGGAGTAACAGCCTAGCAGGGAAGGGAGGAGCTGCAGGACTGTCTGCTCTCTTGAATTTCTTGTGTAATGTACACCACCTAGGCAGGATGTAACAGCAACAAGTCGATGTTGACTGGTACTTGGTCTGTTCGTCAGGATTCATTACCAGGTTATTGGAGTTCGCAGGACTGTCTGCTCTCTTGCAGTCCCAAGTTATTGGAGCTAACTATAGATACGATGAGAATGACAAGAATGA                 ]
[+] EMBL AU176453             [                                                                                                                                             TCCGGTGTCCGTGGCAAGGAGGAAGCGTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTACNNTTTNNGCCGCCGNCACCGAGCACGGCAGCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGANGGGATTCTACGGATCACCCACCAGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_7203#1 GCTCGAGGGTGTTTCCCCACTCTCGCGTCGATTCGCGCGATGGACCTGTTGACATCGGCG ATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGCGGCCGCACCTGTCGCTGCTCG TCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAGGAGGAAGCGTCGACTTCGGCG GCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGAAGAAGAAG AAGAAGGCCAAGAAGGATCACTACGGCGACGCCGCCGCCACCGAGCACGGCAGCGAGCGC GCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACATATCGTCC AAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATTCTACGGATCACCCACCAGAAC ATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAACGCCACCGACTCCTTCAGCCCG AACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTACAGAGCCACCTCGAAGAGATCA ACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGGTTCCAGGGGAACCGCGAGTTCC TGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCCAACCTCGTCAAGCTGCTCGGCT ACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAGTGCATGCGGAACGGCTCGCTGG AGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCTCTCCCGTGGCAAACGCGGATGA AGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTGCACGAGGTGGCCAACCCGCCGG TGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTGGACGAGGACTTCAACTCCAAGC TGTCCGACTTCGGCCTCGCCAAGCTCGGCCCCGTCGGCGACAAGAGCCACGTCAGCACGC GGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCA AGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTGGAGATCATCACCGGCAGGCGGG CGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTCGTCCAATGGGCGGCACCTCTCG TCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCGTTGCTGGAAGAGAAATTCCCCC TCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATGTGCTTGCAGGAGGATGCCAGCA ACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCGTTTCTTGCCGAGCAGAAGTATC ATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGCAGAGACAGGGACTGTAGCAATC CTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCAGATGATGAAATCGAGCACAGGT GACCATAGAGGAGTAACAGCCTAGCAGGGAAGGGAGGAGCTGCAGGACTGTCTGCTCTCT TGAATTTCTTGTGTAATGTACACCACCTAGGCAGGATGTAACAGCAACAAGTCGATGTTG ACTGGTACTTGGTCTGTTCGTCAGGATTCATTACCAGGTTATTGGAGCTCGCAGGACTGT CTGCTCTCTTGCAGTCCCAAGTTATTGGAGCTAACTATAGATACGATGAGAATGACAAGA ATGATGACATTACCATAAGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7203#0      TATTTTTCCAGCGCCTTGCATGCCGTGTTCTTCTCGCCGCGGGAGGAGATCGTCACCCCG 60
consensus_7203#1      ------------------------------------------------------------
                                                                                  

consensus_7203#0      CGGCGTCGTCGTCGGCGTCGGCGGCGGCGCGCGGGGGTCGGCACGAGGGTGCTCGCCCAC 120
consensus_7203#1      ----------------------------------------GCTCGAGGGTGTTTCCCCAC 20
                                                              ** ******** *  *****

consensus_7203#0      TCTCGCGTCGATCCG-GCGATGGGGCTGCTGAGCTCGGCGAGCAGGTCGTGCTGCTGCTG 179
consensus_7203#1      TCTCGCGTCGATTCGCGCGATGGACCTGTTGACATCGGCGATGAAGAGATGCTGCAACGG 80
                      ************ ** *******  *** ***  *******  * *   ******  * *

consensus_7203#0      CT---CCTGGGTGCGCGGCGGCTGCGCCAGCTGCTGCTCGTGGATCCGCGGCTTCTGCGG 236
consensus_7203#1      CAAGACGCTCCTCCGCGGCGGCCGCACCTGTCGCTGCTCGT----CCGC----------- 125
                      *    *     * ********* ** ** *  *********    ****           

consensus_7203#0      CGGCGGCGGGGGGGCGACGACGTCGGCGCAGGACACGGCGGCGTCGGACGCGAAGAAGAG 296
consensus_7203#1      --------------------CAGCGCCATTGGATCTTCCGGTGTC---CGTGGCAAGGAG 162
                                          *  ** *   ***     *** ***   ** *   * ***

consensus_7203#0      GAAGAAGCGGAAGTGGGTGGTGCGCGGCGTCTTCGGCAAGGCCGCGCGGGAGGCGGAGGA 356
consensus_7203#1      GAAGC-GTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAG 221
                      ****  *  **  * ** ** *  *  **     *  ***     * **  *  * **  

consensus_7203#0      GCCGCTGACGCTGGAGACGATGAAGAAGAGGAAGAG-CGCCGCGACGAGCCCGGAGCTGG 415
consensus_7203#1      GTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTACGGCGACGCCGCCGCC-- 279
                      *     ** *  * *** ** ****   * ****   * *  ** ***  ***  **   

consensus_7203#0      AGAAGAACAAGTGGGGGACCAAGAAGAATTGGAAGAAGAAGAAGGGCAAGACCCAACCGA 475
consensus_7203#1      -----ACCGAGCACGGCAGCGAGCG----CGCCAGCTGCA----GGCGCTACGAGAACGA 326
                           * * **   ** * * **       *  **  * *    ***   **   * ***

consensus_7203#0      CCGGCTTGGCCAGCCTCGTCAAGGAGATCTCCCTCGAGAATAGTACCAGGAACAGGGCAG 535
consensus_7203#1      C-GCCGTGGCCGACCTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACG 385
                      * * * *****  ****** ** ** ** **   * **     *  * * ***  *   *

consensus_7203#0      CGGCAGGAGAGATACTACGGATCGGCAACCACAACATTCCAAGCAGAGTATTCACGTTCC 595
consensus_7203#1      CAGCCGAGGGGATTCTACGGATCACCCACCAGAACATCCCCAGCATGGTGCTCACGTACA 445
                      * ** *  * *** *********  * **** ***** ** ****  **  ****** * 

consensus_7203#0      GTCAGCTGGCCGATGCAACCGGCTCTTTCAGCCCGGAAAACCTGCTTGGTGAGGGTGGAT 655
consensus_7203#1      GGCAGCTATGCAACGCCACCGACTCCTTCAGCCCGAACAACCTGCTCGGGGAAGGCGGCT 505
                      * *****   * * ** **** *** ********* * ******** ** ** ** ** *

consensus_7203#0      TCGGGAGAGTCTACAAAGGATTCATCCCAGACACCAAGGAAGTCATAGCGGTTAAGCAGC 715
consensus_7203#1      TTGGGAGGGTGTACAGAGC-CACCTCGAAGAGATCAACGAGATCGTCGCCGTCAAGCAGC 564
                      * ***** ** **** **    * **  *** * *** **  ** * ** ** *******

consensus_7203#0      TGGACAAGGATGGATTGCAGGGGAACCGCGAGTTCCTCGTCGAGGTGCTGATGCTTAGCC 775
consensus_7203#1      TGGACAAGGACGGGTTCCAGGGGAACCGCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTC 624
                      ********** ** ** ******************** ** ************** ** *

consensus_7203#0      TTCTCCATCACCCCAACCTCGTCACCTTGCTCGGTTACAGCACCGAGTGCGACCAGAGAA 835
consensus_7203#1      TCCTGCACCACCCCAACCTCGTCAAGCTGCTCGGCTACTGCACCGACATGGACCAGAGAA 684
                      * ** ** ****************   ******* *** *******    **********

consensus_7203#0      TCCTGGTCTACGAGTACATGCCACTCGGTTCATTGCAAGATCATCTCCTAGATCTGACAC 895
consensus_7203#1      TCCTCGTCTACGAGTGCATGCGGAACGGCTCGCTGGAGGATCATCTCCTAGATCTCCCTC 744
                      **** ********** *****    *** **  ** * *****************  * *

consensus_7203#0      CGAACTCGTCGCCGCTGTCATGGCACACGCGGATGAAGATCGCGGTGGGCGCGGCGAGAG 955
consensus_7203#1      CAAAGGCAAAGCCTCTCCCGTGGCAAACGCGGATGAAGATCGCGGTGGGCGCGGCGAAGG 804
                      * **  *   *** **  * ***** *******************************  *

consensus_7203#0      GGATGGAGTACCTGCACGAGATAGCCAACCCGCCGGTGATCTACCGGGATCTCAAGGCGT 1015
consensus_7203#1      GCATCGAGTACCTGCACGAGGTGGCCAACCCGCCGGTGATCTACCGCGACCTCAAGACGT 864
                      * ** *************** * *********************** ** ****** ***

consensus_7203#0      CCAACATCCTCCTCGACGGCGGGTTCAACGCGAAGCTGTCGGATTTCGGGCTGGCGAAGC 1075
consensus_7203#1      CCAACATCCTCCTGGACGAGGACTTCAACTCCAAGCTGTCCGACTTCGGCCTCGCCAAGC 924
                      ************* ****  *  ****** * ******** ** ***** ** ** ****

consensus_7203#0      TGGGCCCCGTCGGCGACAAGAGCCACGTCACCACCAGGGTGATGGGCACGTACGGCTACT 1135
consensus_7203#1      TCGGCCCCGTCGGCGACAAGAGCCACGTCAGCACGCGGGTCATGGGCACGTACGGCTACT 984
                      * **************************** ***  **** *******************

consensus_7203#0      GCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGATGTCCGACATCTACAGCTTCG 1195
consensus_7203#1      GCGCCCCCGAGTACGCCATGACCGGCAAGCTCACCAAGACGTCGGACATCTACAGCTTCG 1044
                      *************************************** *** ****************

consensus_7203#0      GCGTCGTCCTCCTCGAGATCATCACCGGCCGCCGAGCCATCGACACCACCAAGCCCACTC 1255
consensus_7203#1      GCGTCGTGCTGCTGGAGATCATCACCGGCAGGCGGGCGATCGATACCTCCAGGCCGACGC 1104
                      ******* ** ** *************** * ** ** ***** *** *** *** ** *

consensus_7203#0      GCGAGCAGATTCTTGTTCACTGGGCAGCGCCACTGTTCAGGGACAAGAAGAAGTTCGTGA 1315
consensus_7203#1      ACGAGCAGGTTCTCGTCCAATGGGCGGCACCTCTCGTCAAGGACAAGAAGAGATTCGTGA 1164
                       ******* **** ** ** ***** ** ** **  *** ***********  *******

consensus_7203#0      AGATGGCTGATCCACTGCTGGACATGAAGTTCCCACTGAAAGGGCTGTACCAGGCACTGG 1375
consensus_7203#1      GACTGGCTGACCCGTTGCTGGAAGAGAAATTCCCCCTCAAGGGGCTTTACCAAGCTCTCG 1224
                         ******* **  *******   *** ***** ** ** ***** ***** ** ** *

consensus_7203#0      CAATCTCATCGATGTGCTTGCAAGAAGAGGCGAGCAGCCGGCCTCTGATCAGCGACGTGG 1435
consensus_7203#1      CGATCGCCTCCATGTGCTTGCAGGAGGATGCCAGCAACAGGCCGATGATCAGCGACGTCG 1284
                      * *** * ** *********** ** ** ** **** * ****  ************* *

consensus_7203#0      TGACGGCGCTCACGTTTCTAGCTGACCCAAACTATGATCCTCCTGATGACGTTGAGC--- 1492
consensus_7203#1      TCGCGGCGCTCTCGTTTCTTGCCGAGCAGAAGTATCATCCCCAAGATGGCCCGGATCAGG 1344
                      *  ******** ******* ** ** *  ** *** **** *  **** *   ** *   

consensus_7203#0      ---CTCTGCCGATCAAAGCCCCGAATTT-----------------AGACAGAGAGAGTAG 1532
consensus_7203#1      CCGCCCGGAAGAGCAGAGACAGGGACTGTAGCAATCCTCCCAGGAAGACAGACATGGTTT 1404
                         * * *  ** ** ** *  * * *                  ******* *  **  

consensus_7203#0      CCAGAAAGAAGCTGAAGGAGGTGAC--AACGACAGCGACGAGGGTGGTGAAG------AG 1584
consensus_7203#1      CTGAGATCAAGGCAGATGATGAAATCGAGCACAGGTGACCATAGAGGAGTAACAGCCTAG 1464
                      *    *  ***    * ** *  *   * *    * *** *  * ** * *       **

consensus_7203#0      CAGGTTTAGGGGGAACAACAAGAA-----GTAGCTGAAAATGGCTTCTGGGGAGGG---- 1635
consensus_7203#1      CAGGGAAGGGAGGAGCTGCAGGACTGTCTGCTCTCTTGAATTTCTTGTGTAATGTACACC 1524
                      ****    ** *** *  ** **      *        ***  *** **    *      

consensus_7203#0      ----AGTTGGAACATAGAGATGATTAATCAACCATGATTAG-ATGTGGTTAGAGCTGCAA 1690
consensus_7203#1      ACCTAGGCAGGATGTAACAGCAACAAGTCGATGTTGACTGGTACTTGGTCTGTTCGTCAG 1584
                          **   * *  **      *  * ** *   *** * * *  ****  *  *  ** 

consensus_7203#0      AATTAAT------ATCACTCACCCTCTCCTTTCTCCTTTCAAAATATCACTCACCCTGTT 1744
consensus_7203#1      GATTCATTACCAGGTTATTGGAGCTCGCAGGACTGTCTGCTCTCTTGCAGTC-CCAAGTT 1643
                       *** **       * * *    *** *    **   * *    *  ** ** **  ***

consensus_7203#0      TTTGATGTATAGCACCTATAGGAAAGAATTAACAACAG-GTT---------------- 1785
consensus_7203#1      ATTGGAGCTAACTATAGATACGATGAGAATGACAAGAATGATGACATTACCATAAGCC 1701
                       ***  *   *  *   *** **    * * **** *  * *                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)