These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7209#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1869 fasta sequence [CTTCTTCCTCCTCTCTACGACCTCTTCCCGCCGCNCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACNCGCGCGCGCNTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC-AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGNCGCCGTTGG-GNGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAANCGTTGCCAGGGCAATCGTTGCCGGGGNAGCCGTTG-CGGGGNAGCCGTTG-CAGGGAAATTGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCACAAAAAAAAAAAAAAAA] [+] EMBL C72379 [CTTCTTCCTCCTCTCTACGACCTCTTCCCGCCGCNCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACNCGCGCGCGCNTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGANACCAAGAAGCAGCAGCAAGCAGCCATGCGTCCGTNCT ] [+] EMBL C72438 [ GCCGCTCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACCCGCGCGCGCCTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGNCGCCGTTGG GNGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAANCGTTGCCAGGGCAATCGTTGCCGGGGNAGCCGTTG CGGGGNAGCCGTTG CAGGGAAATTGT ] [+] EMBL AK071385 [ AACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGCCGCCGTTGGCGGGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAACCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCAC ] [+] EMBL AU172476 [ GCGTCCAACCCCACCGCCTTNTT GGNGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||