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Oryza sativa
cluster # 7209 cluster # 7209       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7209#0 length = 1869 sequences # 4  

consensusID : consensus_7209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1869
fasta sequence
                              [CTTCTTCCTCCTCTCTACGACCTCTTCCCGCCGCNCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACNCGCGCGCGCNTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC-AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGNCGCCGTTGG-GNGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAANCGTTGCCAGGGCAATCGTTGCCGGGGNAGCCGTTG-CGGGGNAGCCGTTG-CAGGGAAATTGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCACAAAAAAAAAAAAAAAA]

[+] EMBL C72379               [CTTCTTCCTCCTCTCTACGACCTCTTCCCGCCGCNCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACNCGCGCGCGCNTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGANACCAAGAAGCAGCAGCAAGCAGCCATGCGTCCGTNCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C72438               [                             GCCGCTCCCTCCCCCTCCATTTCCTCTTCTCCACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGACCTGCCATTCCACACCCGCGCGCGCCTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGNCGCCGTTGG GNGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAANCGTTGCCAGGGCAATCGTTGCCGGGGNAGCCGTTG CGGGGNAGCCGTTG CAGGGAAATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK071385             [                                                                                                                                                     AACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGC AGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGCCGCCGTTGGCGGGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAACCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCAC                ]
[+] EMBL AU172476             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTCCAACCCCACCGCCTTNTT GGNGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCAAAAAAAAAAAAAAAAAA]


>consensus_7209#0 CTTCTTCCTCCTCTCTACGACCTCTTCCCGCCGCNCCCTCCCCCTCCATTTCCTCTTCTC CACCGCCTCCAAGAACAGCAAACCCAACTCCTCCCCCCTCCTCTCCTCGCATTTCTTCGA CCTGCCATTCCACACNCGCGCGCGCNTCAAACTCTATGTGAGGGAAGGGAAACAATCGAC TTCCCAGCTGAGAAACCAAGAAGCAGCAGCAGCAGCCATGCGTCCGTCCTTCCTCCTCCT CCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGNCGCCGTTGGGNGC GAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGG CAGCCGTTGCCGGGGCAANCGTTGCCAGGGCAATCGTTGCCGGGGNAGCCGTTGCGGGGN AGCCGTTGCAGGGAAATTGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCA ACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCA GCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGG CGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCA GACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAA CCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTG CGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGAT CAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGA GCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCT CATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGAC GTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGT GATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGG CCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGG GAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGC GTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGG GAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGA CGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCC CACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAA GACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCC CAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTC GCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAA ATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTAT TTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGT TTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCACAAAAAAA AAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)