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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7215 cluster # 7215       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7215#0 length = 850 sequences # 4  

consensusID : consensus_7215#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 850
fasta sequence
                              [GGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGCGAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAACATGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACGGCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAGAAACACATCATCTGCGCAATCCATACAATG]

[+] EMBL CB674876             [GGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGCGAGTGCCGCGAGCCCGACTGCGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAACATGTACAAGATGGGCTTTTGCCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGGCTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACGGCACATTATGGTCGGAACTTCTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAGAAACACATCATCTGCGCAATCCATACAATG]
[+] EMBL CA882826             [                                                                                                                                                        TTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCGGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGG                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA882860             [                                                                                                                                                        TTAAGCTACCAGGGCCACCACCTCCTGTTGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAGGCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCGGGAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGG                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU082198             [                                                                                                                                                                                                                                                                                      ATCCACAGGGTTCAGGTTTACCTAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCAAGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAATCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTACTTCATTGTCAAGAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAGGAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATTCTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGGCTACATTGGTGGT                                                                                                                     ]


>consensus_7215#0 GGCCCGGATGCCCGTGTGCCGCTTCTTCCGCGACTTCGGCGAGTGCCGCGAGCCCGACTG CGCATACAAGCACTCCTACGACGATGTCAAGGAGTGCAACATGTACAAGATGGGCTTTTG CCCTAATGGTCCTAATTGCCGGTACAAGCATGTTAAGCTACCAGGGCCACCACCTCCTGT TGAGGAAGTTCTGCAGAAGATTTTGCAGATTCGCTCTTTCAATAAATTCAATCAGCATAG GCACAATAACTATAATCAGCAAGGGGAGAGACCTCAACATCCACAGGGTTCAGGTTTACC TAACCAAAATAGTATAGATAATACTACAACCACAACCGCTCAGCCTGCTGTTGGACAGCA AGCACAAACTACAAATCAACAGCCACCACAGCAGCAGCAGCAGCAACAACAACAACAACA ACAACAACAGAAGCCAAATACAAATGACCAAGTCCAATCTGTTCCAAATGGCTCGTCGAA TCAAGCCACTAGAATTGCAACGCCCCTTCCACAAGGGCCATCTAGGTACTTCATTGTCAA GAGTTGCAATAGGGAGAATCTGGAGATATCAGTTCAGCAGGGCATTTGGGCTACCCAAAG GAGTAATGAGGCTAAACTTAATGAAGCCTTTGAATCCATTGAGAATGTTATTTTGATATT CTCAATCAATAGAACTCGTAATTTCCAGGGTTGTGCAAAGATGACTTCTAGGATTGGTGG CTACATTGGTGGTGGAAATTGGAAATCTGCTCATGGAACGGCACATTATGGTCGGAACTT CTCCATACAATGGCTTAAGCTCTGTGAACTGTCATTTCAGAAACACATCATCTGCGCAAT CCATACAATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)