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Oryza sativa
cluster # 7291 cluster # 7291       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7291#0 length = 2457 sequences # 4  

consensusID : consensus_7291#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2457
fasta sequence
                              [GGCGCCGCCGCAGCCGGAGGTGGAGGGGGCGGACGCGTCGGCCGAAGGGGGCACTAGCGCTAGCGATTCCGAGGCGGATGAGGCGGCGGGGAACTTAGGTAGGGGCTCCAGGGATATTGAGATGGCGGAGGCGGCGGCGCCGCCGCCA-TCACAGCAGCAGCAGCCGAGGCCGCGTGCCCCGTACGCCATACCCGAGTGGAGCGCCGCACCGGGCCACCCCTTCTTCCTCGAGGTTCTCAAGGACGGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATTGATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAGTTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTTCATCAATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAAAAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCTTCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTATCTCATGGGGTATGTCTGAGGATGCAGTCGAAGATTCTGCAGAGGATGAAGCTGATGAGATCACATGGCAAACCTACAAAGGTCAACTCACTGATAGACAGGAGAAAACACGAAGCAAAATAATAAAGCGATTGGAAAAGATTACCAACATGAAGAAAGAAATTGATGCAATAAGAGCTAAGGACATTTCTCAAGGTGGGTTAACCCAAGGTCAACAAACACAGATTGCACGGAATGAGCAAAGGACATCTCAGCTTATGGAGGAGCTGGAAAATTTAGAAGAAACTTTGAATGACAGTATACGGGAAAGTCTTGGTGCTCGCACTGGAAACTCAAATCGTGGTAGTCATAAAGCAAGTCTTGAGGAAGAAGATGACATTCTTAGTGACGAAGATGACTTCTATGATCGGACGAAGAAGAAATCTTCTAGTCATAAATCCAGTGAGCAGCAAGTGGAGACTGCTGATAGTCTTCTTGATAAAAAAGATACCATAACCAGCGATATTGAAAGTAAAAAGAAATTGGTTGAAGAAGAGAAGAATAAGTTGGCAAAAAGTGAGAATGCGGATGTTGGGGACGACCTTGATGCTTACATGAGTGGATTATCATCTCAATTAGTACATGACAAGATTGCCCAAATCCAGAAGGAGCTTTCTGATCTTCAAACTGAGCTGGGCAGGGTGGTTTACCTACTGAAAATAGCTGATCCTATGGGAGAAGCAGCTCGCAAGAGGGATCTCAAGCCACGAGAAACAAAATCTCCAGCATCTAATGATAGTCTAAGACCAGAGTCCAGAAAGCAAAACAAAGTTGCACAAAACAAAGCCTCAACAGAGGAGAAGCTTAAGGAATCTTGTGCTGAAAAAACACAAGTGGATAAACCAGCCGAGGAAGAGAAGGGTATCTCCACAAACCAAGAAAATGGCAGCAAACCTGCATTCTCCATTCCAAAACCTCAGTGGCTTGGTGACAAGAGGACCGTGGAATCTGAAGAGAACTGTATAAAAGAAGAAAGTGCCAATGAAGAGGAGACTGATAATTTTGTGGACTACAAAGATCGAAAAACTATTCTTTCAGGTTCCGCCAATGGAAAAGACCTTGAAGAAGCTGCTCCTGGGCTTATTTTACGGAAGAGAAAGTCTGATCAATCAGCAGCCAATGAGGTGGAATCTTCAGTTGAATCCGAAGCATCTGCTGCTGATG-CTGTGGCCCTCTTGCTG-AAGCA-CAAACGTGG-TTTACAAACTTCTGAAGATATGG-AGGATGAGAATGAACCACAAGCTAGCAAGAGAAAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGT-CCAGCAAGACCAGATTTTCTGGACGCAGGTCCAGATCATGAAACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGACTCGACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCTAGTCCTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTGCTCGCCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGAGAGTTGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACAAAGGATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACATCATCGTCCCATAGTATAACGGTTGTTTGGTGCCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK066767             [GGCGCCGCCGCAGCCGGAGGTGGAGGGGGCGGACGCGTCGGCCGAAGGGGGCACTAGCGCTAGCGATTCCGAGGCGGATGAGGCGGCGGGGAACTTAGGTAGGGGCTCCAGGGATATTGAGATGGCGGAGGCGGCGGCGCCGCCGCCA TCACAGCAGCAGCAGCCGAGGCCGCGTGCCCCGTACGCCATACCCGAGTGGAGCGCCGCACCGGGCCACCCCTTCTTCCTCGAGGTTCTCAAGGACGGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATTGATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAGTTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTTCATCAATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAAAAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCTTCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTATCTCATGGGGTATGTCTGAGGATGCAGTCGAAGATTCTGCAGAGGATGAAGCTGATGAGATCACATGGCAAACCTACAAAGGTCAACTCACTGATAGACAGGAGAAAACACGAAGCAAAATAATAAAGCGATTGGAAAAGATTACCAACATGAAGAAAGAAATTGATGCAATAAGAGCTAAGGACATTTCTCAAGGTGGGTTAACCCAAGGTCAACAAACACAGATTGCACGGAATGAGCAAAGGACATCTCAGCTTATGGAGGAGCTGGAAAATTTAGAAGAAACTTTGAATGACAGTATACGGGAAAGTCTTGGTGCTCGCACTGGAAACTCAAATCGTGGTAGTCATAAAGCAAGTCTTGAGGAAGAAGATGACATTCTTAGTGACGAAGATGACTTCTATGATCGGACGAAGAAGAAATCTTCTAGTCATAAATCCAGTGAGCAGCAAGTGGAGACTGCTGATAGTCTTCTTGATAAAAAAGATACCATAACCAGCGATATTGAAAGTAAAAAGAAATTGGTTGAAGAAGAGAAGAATAAGTTGGCAAAAAGTGAGAATGCGGATGTTGGGGACGACCTTGATGCTTACATGAGTGGATTATCATCTCAATTAGTACATGACAAGATTGCCCAAATCCAGAAGGAGCTTTCTGATCTTCAAACTGAGCTGGGCAGGGTGGTTTACCTACTGAAAATAGCTGATCCTATGGGAGAAGCAGCTCGCAAGAGGGATCTCAAGCCACGAGAAACAAAATCTCCAGCATCTAATGATAGTCTAAGACCAGAGTCCAGAAAGCAAAACAAAGTTGCACAAAACAAAGCCTCAACAGAGGAGAAGCTTAAGGAATCTTGTGCTGAAAAAACACAAGTGGATAAACCAGCCGAGGAAGAGAAGGGTATCTCCACAAACCAAGAAAATGGCAGCAAACCTGCATTCTCCATTCCAAAACCTCAGTGGCTTGGTGACAAGAGGACCGTGGAATCTGAAGAGAACTGTATAAAAGAAGAAAGTGCCAATGAAGAGGAGACTGATAATTTTGTGGACTACAAAGATCGAAAAACTATTCTTTCAGGTTCCGCCAATGGAAAAGACCTTGAAGAAGCTGCTCCTGGGCTTATTTTACGGAAGAGAAAGTCTGATCAATCAGCAGCCAATGAGGTGGAATCTTCAGTTGAATCCGAAGCATCTGCTGCTGATG CTGTGGCCCTCTTGCTG AAGCA CAAACGTGG TTTACAAACTTCTGAAGATATGG AGGATGAGAATGAACCACAAGCTAGCAAGAGAAAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGT CCAGCAAGACCAGATTTTCTGGACGCAGGTCCAGATCATGAAACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGACTCGACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCTAGTCCTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTGCTCGCCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGAGAGTTGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACAAAGGATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACATCATCGTCCCATAGTATAACGGTT                                 ]
[+] EMBL C72150               [                                                                                                                                    GGCGGCGCCG CGCCANTCACAGCAGCAGCAGCCGAGGCCGCGTGCCCCGTACGCCATACCCGAGTGGAGCGCCGCACCGGGCCACCCCTTCTTCCTCGAGGTTCTCAAGGACGGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATTGATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAGTTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTTCATCAATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAAAAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCTTCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTA CTCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK069382             [                                                                                                                                                                                                                                                  GACGGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATTGATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAGTTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTTCATCAATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAAAAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCTTCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTATCTCATGGGGTATGTCTGAGGATGCAGTCGAAGATTCTGCAGAGGATGAAGCTGATGAGATCACATGGCAAACCTACAAAGGTCAACTCACTGATAGACAGGAGAAAACACGAAGCAAAATAATAAAGCGATTGGAAAAGATTACCAACATGAAGAAAGAAATTGATGCAATAAGAGCTAAGGACATTTCTCAAGGTGGGTTAACCCAAGGTCAACAAACACAGATTGCACGGAATGAGCAAAGGACATCTCAGCTTATGGAGGAGCTGGAAAATTTAGAAGAAACTTTGAATGACAGTATACGGGAAAGTCTTGGTGCTCGCACTGGAAACTCAAATCGTGGTAGTCATAAAGCAAGTCTTGAGGAAGAAGATGACATTCTTAGTGACGAAGATGACTTCTATGATCGGACGAAGAAGAAATCTTCTAGTCATAAATCCAGTGAGCAGCAAGTGGAGACTGCTGATAGTCTTCTTGATAAAAAAGATACCATAACCAGCGATATTGAAAGTAAAAAGAAATTGGTTGAAGAAGAGAAGAATAAGTTGGCAAAAAGTGAGAATGCGGATGTTGGGGACGACCTTGATGCTTACATGAGTGGATTATCATCTCAATTAGTACATGACAAGATTGCCCAAATCCAGAAGGAGCTTTCTGATCTTCAAACTGAGCTGGGCAGGGTGGTTTACCTACTGAAAATAGCTGATCCTATGGGAGAAGCAGCTCGCAAGAGGGATCTCAAGCCACGAGAAACAAAATCTCCAGCATCTAATGATAGTCTAAGACCAGAGTCCAGAAAGCAAAACAAAGTTGCACAAAACAAAGCCTCAACAGAGGAGAAGCTTAAGGAATCTTGTGCTGAAAAAACACAAGTGGATAAACCAGCCGAGGAAGAGAAGGGTATCTCCACAAACCAAGAAAATGGCAGCAAACCTGCATTCTCCATTCCAAAACCTCAGTGGCTTGGTGACAAGAGGACCGTGGAATCTGAAGAGAACTGTATAAAAGAAGAAAGTGCCAATGAAGAGGAGACTGATAATTTTGTGGACTACAAAGATCGAAAAACTATTCTTTCAGGTTCCGCCAATGGAAAAGACCTTGAAGAAGCTGCTCCTGGGCTTATTTTACGGAAGAGAAAGTCTGATCAATCAGCAGCCAATGAGGTGGAATCTTCAGTTGAATCCGAAGCATCTGCTGCTGATG CTGTGGCCCTCTTGCTG AAGCA CAAACGTGG TTTACAAACTTCTGAAGATATGG AGGATGAGAATGAACCACAAGCTAGCAAGAGAAAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGT CCAGCAAGACCAGATTTTCTGGACGCAGGTCCAGATCATGAAACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGACTCGACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCTAGTCCTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTGCTCGCCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGAGAGTTGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACAAAGGATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACATCATCGTCCCATAGTATAACGGTTG                                ]
[+] EMBL AU075649             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGCATNTCCTGCTGATGCCAAAAACCCNCTTGCTGAAANCACCAAACGTGGTTTTACAAACTTCTGAAGATCTGGCAGGATGAGAATGAACCACAAGCTNGCAAGAGANAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGTCCCAGCAAGACCAGATTTTNTGGACGCAGGTCCAGATCATGAAACATGGGTGCCNCCTGAAGGTCAAACTGGTGATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGACTCGACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCTAGTCCTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTGCTCGCCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGAGAGTTGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACAAAGGATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACATCATCGTCCCATAGTATAACGGTTGTTTGGTGCCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7291#0 GGCGCCGCCGCAGCCGGAGGTGGAGGGGGCGGACGCGTCGGCCGAAGGGGGCACTAGCGC TAGCGATTCCGAGGCGGATGAGGCGGCGGGGAACTTAGGTAGGGGCTCCAGGGATATTGA GATGGCGGAGGCGGCGGCGCCGCCGCCATCACAGCAGCAGCAGCCGAGGCCGCGTGCCCC GTACGCCATACCCGAGTGGAGCGCCGCACCGGGCCACCCCTTCTTCCTCGAGGTTCTCAA GGACGGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCG AATTGATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTT GCAGTTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTT CATCAATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAAT TCGATTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCC TGAAAAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGA AGCTTCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTATCTCATGGGGTAT GTCTGAGGATGCAGTCGAAGATTCTGCAGAGGATGAAGCTGATGAGATCACATGGCAAAC CTACAAAGGTCAACTCACTGATAGACAGGAGAAAACACGAAGCAAAATAATAAAGCGATT GGAAAAGATTACCAACATGAAGAAAGAAATTGATGCAATAAGAGCTAAGGACATTTCTCA AGGTGGGTTAACCCAAGGTCAACAAACACAGATTGCACGGAATGAGCAAAGGACATCTCA GCTTATGGAGGAGCTGGAAAATTTAGAAGAAACTTTGAATGACAGTATACGGGAAAGTCT TGGTGCTCGCACTGGAAACTCAAATCGTGGTAGTCATAAAGCAAGTCTTGAGGAAGAAGA TGACATTCTTAGTGACGAAGATGACTTCTATGATCGGACGAAGAAGAAATCTTCTAGTCA TAAATCCAGTGAGCAGCAAGTGGAGACTGCTGATAGTCTTCTTGATAAAAAAGATACCAT AACCAGCGATATTGAAAGTAAAAAGAAATTGGTTGAAGAAGAGAAGAATAAGTTGGCAAA AAGTGAGAATGCGGATGTTGGGGACGACCTTGATGCTTACATGAGTGGATTATCATCTCA ATTAGTACATGACAAGATTGCCCAAATCCAGAAGGAGCTTTCTGATCTTCAAACTGAGCT GGGCAGGGTGGTTTACCTACTGAAAATAGCTGATCCTATGGGAGAAGCAGCTCGCAAGAG GGATCTCAAGCCACGAGAAACAAAATCTCCAGCATCTAATGATAGTCTAAGACCAGAGTC CAGAAAGCAAAACAAAGTTGCACAAAACAAAGCCTCAACAGAGGAGAAGCTTAAGGAATC TTGTGCTGAAAAAACACAAGTGGATAAACCAGCCGAGGAAGAGAAGGGTATCTCCACAAA CCAAGAAAATGGCAGCAAACCTGCATTCTCCATTCCAAAACCTCAGTGGCTTGGTGACAA GAGGACCGTGGAATCTGAAGAGAACTGTATAAAAGAAGAAAGTGCCAATGAAGAGGAGAC TGATAATTTTGTGGACTACAAAGATCGAAAAACTATTCTTTCAGGTTCCGCCAATGGAAA AGACCTTGAAGAAGCTGCTCCTGGGCTTATTTTACGGAAGAGAAAGTCTGATCAATCAGC AGCCAATGAGGTGGAATCTTCAGTTGAATCCGAAGCATCTGCTGCTGATGCTGTGGCCCT CTTGCTGAAGCACAAACGTGGTTTACAAACTTCTGAAGATATGGAGGATGAGAATGAACC ACAAGCTAGCAAGAGAAAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGTCCAGCAAG ACCAGATTTTCTGGACGCAGGTCCAGATCATGAAACATGGGTGCCACCTGAAGGTCAAAC TGGTGATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGA CTCGACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCT AGTCCTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTG CTCGCCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGA GAGTTGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACA AAGGATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACA TCATCGTCCCATAGTATAACGGTTGTTTGGTGCCAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)