cluster # 7299

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7299 cluster # 7299 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7299#0 length = 736 sequences # 4

consensusID : consensus_7299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 736
fasta sequence

                              [TTTTTTTTTTTTTTTGGGTTTCACAAATAATAATAATAATCACAAGTGTAAATGCGAATTTTACAGGATTTTTTTTACATGTAAAAATGATAGATGAACATCATTGATCTAGATATACATATGTATTAAAACATTGGAAAAATCAAATGTAAACAACCGTCTCGGTGAAGGCTGACCAAATAATATACCTTTTTACCATAAGTCCTACATAAACAACGTATTCAAAATCATGTGCACATATATAGCTTCACAACAATTTGCGGGAAGGACCATAAAAAATAATTATTGGCTTACGCACAGGCAGACTCTATCTCTCTTTTTTT-AAAAAAGAATTATTT--AGAGATCAAC-AATTTCCATGCGATCCAATGCAAGAGCAC-AAGTGTA-CGTTACTTGAGCTGGATGCCACT-CTTATAGACGGAG-CCGACCTTGAAGGCTTCAGGGATGACATCGTCGACAACGCGGTAGCCGCCATTCTTGACAAGGAAACGGACGGAGAAGGGGCCCTTGAGTTTTGCCCCAGTTTTGAGCGTCCAGGTGTTAGCCGATGACTCCTTGAGCCCCGTCCAGTC-ACCGGCGCCCTTCTCCTTTACCTCCACCTCAAAGATGGCGACATTGGTG-ATGAGGTTCAGGCTAGTGGTGCTAGAGCCTTGACCGACTTTGAAGGTGAGCTCAGTGGCGTACGAGCCGATAACCAACAATGCGGCCATTGCCGTGGCGAGCAGGAAGGATNACAAGG]

[+] EMBL CA762736             [TTTTTTTTTTTTTTTGGGTTTCACAAATAATAATAATAATCACAAGTGTAAATGCGAATTTTACAGGATTTTTTTTACATGTAAAAATGATAGATGAACATCATTGATCTAGATATACATATGTATTAAAACATTGGAAAAATCAAATGTAAACAACCGTCTCGGTGAAGGCTGACCAAATAATATACCTTTTTACCATAAGTCCTACATAAACAACGTATTCAAAATCATGTGCACATATATAGCTTCACAACAATTTGCGGGAAGGACCATAAAAAATAATTATTGGCTTACGCACAGGCAGACTCTATCTCTCTTTTTTT AAAAAAGAATTATTT  AGAGATCAAC AATTTCCATGCGATCCAATGCAAGAGCAC AAGTGTA CGTTACTTGAGCTGGATGCCACT CTTATAGACGGAG CCGACCTTGAAGGCTTCAGGGATGACATCGTCGACAACGCGGTAGCCGCCATTCTTGACAAGGAAACGGACGGAGAAGGGGCCCTTGAGTTTTGCCCCAGTTTTGAGCGTCCAGGTGTTAGCCGATGACTCCTTGAGCCCCGTCCAGTC ACCGGCGCCCTTCTCCTTTACCTCCACCTCAAAGATGGCGACATTGGTG ATGAGGTTCAGGCTAGTGGTGCTAGAGCCTTGACCGACTTTGAAGGTGAGCTCAGTG                                                             ]
[+] EMBL CA762738             [    TTTTTTTTTTT   TTTCACAAATAATAATAATAATCACAAGTGTAAATGCGAATTTTACAGGATTTTTTTTACATGTAAAAATGATAGATGAACATCATTGATCTAGATATACATATGTATTAAAACATTGGAAAAATCAAATGTAAACAACCGTCTCGGTAAAGGCTGACCAAATAATATACCTTTTTACCATAAGTCCTACATAAACAACGTATTCAAAATCATGTGCACATATATAGCTTCACAACAATTTGCGGGAAGGACCATAAAAAATAATTATTGGCTTACGCACAGGCAGACTCTATCTCTTTTTTTTT AAAAAAGAATTATTT  AGAGATCAAC AATTTCCATGCGATCCAATGCAAGAGCAC AAGTGTA CGTTACTTGAGCTGGATGCCACT CTTATAGACGGAG CCAACCTTGAAGGCTTCAGGGATGACATCGTCAACAACGCGGTAGCCGCCATTCTTGACAAGGAAACGGACGGAAAAGGGGCCCTTGAGTTTTGCCCCAGTTTTGAGCGTCCAGGTGTTAGCCGATGACTCCTTGAGCCCCGTCCAGTC ACCGGCGCCCTTCTCCTTTACCTCCACCTCAAAGATGGCGACATTGGTGAATGAGGTTCAGGCTAGTGGTGCTAGAGCCTTGACCGACTTTGAAGGTGAGCTCAGTGGCGTACGAGCCGATAACCAACAATGC                                   ]
[-] EMBL C98541               [                                           tttttttAATGCGAATTTTACAGGATTTTTTTTACATGTAAAAATGATAGATGAACATCATTGATCTAGATATACATATGTATTAAAACATTGGAAAAATCAAATGTAAACAACCGTCTCGGTGAAGGCTGACCAAATAATATACCTTTTTACCATAAGTCCTACATAAACAACGTATTCAAAATCATGTGCACATATATAGCTTCACAACAATATGCGGGAAGGACCATAAAAAATAATTATTGGCTTGCGCACAGGCAGACTCGATCTCTCTTTTTTT AAAAAAGAATTATTT  AGAGATCAAC AATTTCCATGCGATCCAATGCAAGAGCAC AAGTGTA CGTTACTTGAGCTGGATGCCACT CTTATAGACGGAG CCGACCTTGAAGGCTTCAGGGATGACATCGTCGACGACGCGGTAGCCGCCATTCTTGACAAGGAAGCGGACGGAGAAGGGGCCCTTGAGTTTTGCCCCGGTTTTGAGCGTCCAGGTGTTAGCCGATGACTCCTTGAGCCCCGTCCAGTC ACCGGTGCCCTT                                                                                                                                                            ]
[-] EMBL C71811               [                                                                                                                                                                                                                                                                                                                   tcccccCTTTTTTTTTAAAAAAAGAATTATTTTAAGAGATCAACAAATTTCCATGCGATCCAATGCAAGAGCACAAAGTGTACCGTTACTTGAGCTGGATGCCACTNCTTATAGACGGAGCCCGACCTTGAAGGCTTCAGGGATGACATCGTCGACGACGCGGTAGCCGCCATTCTTGACAAGGAAGCGGACGGAGAAGGGGCCCTTGAGTTTTGCCCCGGTTTTGAGCGTCCAGGTGTTAGCCGATGACTCCTTGAGCCCCGTCCAGTCAACCGGTGCCCTTCTCCTTTACCTCCACCTNAGAGATGGCGACATTGGTG ATGAGGTTCAGGCTAGTGGTGCTAGAGCCTGGACCGACTTTGAAGGTGAGCTCAGTGGCGTACGAGCCGATGACCAACAATGCGGCCATTGCCGTGGCGAGCAGGAAGGATNACAAGG]




>consensus_7299#0
TTTTTTTTTTTTTTTGGGTTTCACAAATAATAATAATAATCACAAGTGTAAATGCGAATT
TTACAGGATTTTTTTTACATGTAAAAATGATAGATGAACATCATTGATCTAGATATACAT
ATGTATTAAAACATTGGAAAAATCAAATGTAAACAACCGTCTCGGTGAAGGCTGACCAAA
TAATATACCTTTTTACCATAAGTCCTACATAAACAACGTATTCAAAATCATGTGCACATA
TATAGCTTCACAACAATTTGCGGGAAGGACCATAAAAAATAATTATTGGCTTACGCACAG
GCAGACTCTATCTCTCTTTTTTTAAAAAAGAATTATTTAGAGATCAACAATTTCCATGCG
ATCCAATGCAAGAGCACAAGTGTACGTTACTTGAGCTGGATGCCACTCTTATAGACGGAG
CCGACCTTGAAGGCTTCAGGGATGACATCGTCGACAACGCGGTAGCCGCCATTCTTGACA
AGGAAACGGACGGAGAAGGGGCCCTTGAGTTTTGCCCCAGTTTTGAGCGTCCAGGTGTTA
GCCGATGACTCCTTGAGCCCCGTCCAGTCACCGGCGCCCTTCTCCTTTACCTCCACCTCA
AAGATGGCGACATTGGTGATGAGGTTCAGGCTAGTGGTGCTAGAGCCTTGACCGACTTTG
AAGGTGAGCTCAGTGGCGTACGAGCCGATAACCAACAATGCGGCCATTGCCGTGGCGAGC
AGGAAGGATNACAAGG

clustalw multiple alignements is not computed in this case