cluster # 7310

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Oryza sativa
cluster # 7310 cluster # 7310 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7310#0 length = 797 sequences # 4
consensusID : consensus_7310#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 797
fasta sequence
                              [TTTTTTTATGAGTTCACGATGAACATTCACAAGAAATTACTTGCAAGCATGTGTCACATGGTTCTAACAATCCTAACAATTGAAGAGGAAATTTCAACATTTCATAGTGTTTGTTCCCTTCATCTTCTTGCTATTTATTCTCTTCTTTATAATTAGACTTGACTGGTTTCCTGGATGATGGCCTTGCATTAGAACCAAAGCTACCTCAAAATCAAACAGCTATCTTTCCTCGTTTGGACCACTTGCAGAACTTTCCAGATTGTTTTTTTTGTTGGGTGATGGGTTCATGACATCCTCACTTCTAAACCCAAGCTCTGACATATCTTGCTTTGCC-ATCAGGTTTCTCTCCATCCTAC-ATTCC-AGGT-ACTTCTTC-GAGAACTGCC-GAC-ATTTTTC-GGACT--GAAATCCA--GTT-GATTTAA--GG-CAC-GC-AAGAT-AATCTTTCTTCTCCAAGTCACACTCGTGCAAGTGATCCAGTGGGAACACTCCCTTTTCGGGAGGCACAGGCCTCACGCCCCGATTTCCACCAAACGCACCGCCTGCACTCATTT-CCAATGGTG-ATACTTTCTCAGTGCTCAAACCGCCCCACCAGAACTTCCCAGATGAGTAGCAACCAAGGGGGGAAATGCGGATTCAGTTGAAACC-----CAGGATCCCCTCCCCTGCTCTGCTCTGCTCGCCAGATGGAGATCGGCGCCTCTCCCCTGTTCAGCCGAGGATGGCGCAAGTAGCGGAGGAGACGAGACGGGAGATTTTCTTTTACGCGCAGGGAAGGGGAAGATACTCTCAAGTACTCACCTTTTATCTCT]

[+] EMBL CF314979             [TTTTTTTATGAGTTCACGATGAACATTCACAAGAAATTACTTGCAAGCATGTGTCACATGGTTCTAACAATCCTAACAATTGAAGAGGAAATTTCAACATTTCATAGTGTTTGTTCCCTTCATCTTCTTGCTATTTATTCTCTTCTTTATAATTAGACTTGACTGGTTTCCTGGATGATGGCCTTGCATTAGAACCAAAGCTACCTCAAAATCAAACAGCTATCTTTCCTCGTTTGGACCACTTGCAGAACTTTCCAGATTGTTTTTTTTGTTGGGTGATGGGTTCATGACATCCTCACTTCTAAACCCAAGCTCTGACATATCTTGCTTTGCC ATCAGGTTTCTCTCCATCCTAC ATTCC AGGT ACTTCTTC GAGAACTGCC GAC ATTTTTC GGACT  GAAATCCA  GTT GATTTAA  GG CAC GC AAGAT AATCTTTCTTCTCCAAGTCACACTCGTGCAAGTGATCCAGTGGGAACACTCCCTTTTCGGGAGGCACAGGCCTCACGCCCCGATTTCCACCAAACGCACCGCCTGCACTCATTT CCAATGGTG ATACTTTCTCAGTGCT                                                                                                                                                                                                                                           ]
[-] EMBL AU081383             [           tTTCACGATGAACATTCACAAGAAATTACTTGCAAGCATGTGTCACATGGTTCTAACAATCCTAACAATTGAAGAGGAAATTTCAACATTTCATAGTGTTTGTTCCCTTCATCTTCTTGCTATTTATTCTCTTCTTTATAATTAGACTTGACTGGTTTCCTGGATGATGGCCTTGCATTAGAACCAAAGCTACCTCAAAATCAAACAGCTATCTTTCCTCGTTTGGACCACTTGCAGAACTTTCCAGATTGTTTTTTTTGTTGGGTGATGGGTTCATGACATCCTCACTTCTAAACCCAAGCTCTGACATATCTTGCTTTGCCAATCAGGTTTCTCTCCATCCTACAATTCCAAGGTAACTTCTTCGGAGAACTGCCGGACAATTTTNCGGGACTTNGAAATCCAAGGTTGGATTTAAAGGGNAACGGCAAAGATAAATCNTT                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF314978             [                                                                                                                                                                                                                                         TTGGACCACTTGCAGAACTTTCCAGATTGTTTTTTTTGTTGGGTGATGGGTTCATGACATCCTNCCTTCTAAACCCAAGCTCTGACATATCTTGCTTTGCC ATCAGGTTTCTCTCCATCCTAC ATTCC AGGT ACTTCTTC GAGAACTGCC GAC ATTTTTC GGACT  GAAATCCA  GTT GATTTAA  GG CAC GC AAGAT AATCTTTCTTCTCCAAGTCACACTCGTGCAAGTGATCCAGTGGGAACACTCCCTTTTCGGGAGGCACAGGCCTCACGCCCCGATTTCCACCAAACGCACCGCCTGCACTCATTT CCAATGGTG ATACTTTCTCAGTGCTCAAACCGCCCCACCAGAACTTCCCAGATGAGTAGCAACCAAGGGGGGAAATGCGGATTCAGTTGAAACC     CAGGATCCCCTCCCCTGCTCTGCTCTGCTCGCCAGATGGAGATCGGCGCCTCTCCCCTGTTCAGCCGAGGATGGCGCAAGTAGCGGAGGAGACGAGACGGGAGATTTTCTTTTACGCGCAGGGAAGGGGAAGATACTCTC                     ]
[-] EMBL OSS1447A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAACTCATTTCCCAATGGTGAATACTTTCTAAGTGCTAAAACCGCCCCACCAGAACTTCCCAGATGAGTAGCAACCAAGGGGGGAAATGCGGATTCAGTTGAAACCCTAAACAGGATCCCCTCCCCTGCCCTGCTCTGCTCGCCAGATGGAGATCGGCGCCTCTCCCCTGTTCAGCCGAGGATGGCGCAAGTAGCGGAGGAGACGAGACGGGAGATTTTCTTTTACGCGCAGGGAAGGGGAAGATACTCTCAAGTACTCACCTTTTATCTCT]




>consensus_7310#0
TTTTTTTATGAGTTCACGATGAACATTCACAAGAAATTACTTGCAAGCATGTGTCACATG
GTTCTAACAATCCTAACAATTGAAGAGGAAATTTCAACATTTCATAGTGTTTGTTCCCTT
CATCTTCTTGCTATTTATTCTCTTCTTTATAATTAGACTTGACTGGTTTCCTGGATGATG
GCCTTGCATTAGAACCAAAGCTACCTCAAAATCAAACAGCTATCTTTCCTCGTTTGGACC
ACTTGCAGAACTTTCCAGATTGTTTTTTTTGTTGGGTGATGGGTTCATGACATCCTCACT
TCTAAACCCAAGCTCTGACATATCTTGCTTTGCCATCAGGTTTCTCTCCATCCTACATTC
CAGGTACTTCTTCGAGAACTGCCGACATTTTTCGGACTGAAATCCAGTTGATTTAAGGCA
CGCAAGATAATCTTTCTTCTCCAAGTCACACTCGTGCAAGTGATCCAGTGGGAACACTCC
CTTTTCGGGAGGCACAGGCCTCACGCCCCGATTTCCACCAAACGCACCGCCTGCACTCAT
TTCCAATGGTGATACTTTCTCAGTGCTCAAACCGCCCCACCAGAACTTCCCAGATGAGTA
GCAACCAAGGGGGGAAATGCGGATTCAGTTGAAACCCAGGATCCCCTCCCCTGCTCTGCT
CTGCTCGCCAGATGGAGATCGGCGCCTCTCCCCTGTTCAGCCGAGGATGGCGCAAGTAGC
GGAGGAGACGAGACGGGAGATTTTCTTTTACGCGCAGGGAAGGGGAAGATACTCTCAAGT
ACTCACCTTTTATCTCT
clustalw multiple alignements is not computed in this case