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Oryza sativa
cluster # 7367 cluster # 7367       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7367#0 length = 1756 sequences # 4  

consensusID : consensus_7367#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1756
fasta sequence
                              [GCCGCTAAAAAACTCTCCTCTCATTTCAGAGGAATAAATCCTCGTTGATCGATTGCTTGCCTTCTATGCGATCTTGTTCGTTGCTTGCGGCTTTAATTCATCCATCAATCGATTGATCTCTGAACTTTCTGAGAAGCAGAGAGGAGGTAGCTTGACAGCAGCTGCTTCTCGCATGTACAAGAAGAAGAAGCTGAGGTTCTTAGCCACCGTCGTCATCGCTGCTGCATCACATGGGCGGCGTGATCGGAGCGTTATTCCGCGGTGGTGGTCACCGTCGTGAGATGCACAGAGCGCCGATGAACCAGCCGGGATACGGCGGCGGCGGCGAGAACCACCGGAGGGCGATGCTGACCAAGAAGTACTCGTACATACCTGACAACTACCAGTCTCTCGATCAGGTGACAGCGGCTCTGCGAGATCAAGGGCTCGAGTCGTCGAACCTGATACTTGGCATAGACTTCACCAAGAGCAACGAATGGACA-GGGAAGCGTTCGTTCAGTGGGCAGAGCCTGCACAAGATAGGCAGCACACCAAATCCATATGAGCAAGCCATCAGCATCATCGGCAAGACATTGGCACCTTTCGACGATGATAATCTCATCCCATGCTTTGGCTTCGGCGACGCAACCACACATGACTACAATGTGTTCAGCTTCCATCCTGACAACTCACCCTGCCATGGATTCGAGGAGGTCCTATCATGCTACAAGAAGATTGTGCCACACCTCAGGCTATCTGGGCCTACCTCTTTCGCGCCGATCGTCGAGGCGGCCGTCGACATTGTTGACAGGAGTGGAGGACAGTATCATGTTCTTGTCATCGTTGCTGATGGACAGGTGACTAGGAGTGTTGATACAAGCGATAATGATCTGAGCCCCCAGGAGAGGAGGACAGTGGACTCCGTTGTCATGGCAAGCTCCTACCCTCTATCCATTGTTCTTGTTGGAGTTGGAGATGGCCCATGGGAAGACATGCAGAAGTTCGACGACAAGATCCCGGCTCGCCAGTTCGACAACTTTCAGTTTGTGAACTTCACGTCGATCATGTCGAGGAGCACGACGCAGCAGCAGAAAGAGTCGGCGTTCGCCTTGGCGGCTCTCATGGAGGTGCCCATCCAATACAAGGCCACCATGGAGCTCGGCATCCTAGGCCGGTCGACGGGGAAGGCTAAGAGGATCATGCCTGCTCCGCCGCCGCTGCCGTCGGCGGCGGGGAGGCAGCCATCGCTGAGGAGGGAAGACAGCGCCGCCGCCACCGCTGCCGCCGCCCCACCGTCACCAAGAGAGGATCAAGTGTGCCCAATCTGCCTGACCAATGCCAAGGACTTGGCATTTGGGTGTGGCCACATGTGCTGCAGGGAATGTGGGGAGAGCCTGACCAAATGCCCAATTTGTCGACAGACGATTCGGTCCAAGCTGAGGCTGTACTCAGGATGATCAAATGCTTATGGACTGATGGAATGGAGCTTAAATCTGTTCTTAATGTACAGAATGCATGAACATATCGTTTGTGAGAAATACTCAAATCAAATGCATGCATTGGATTTGTGCTGCGAGATAGGGGACCAAACGAATGATTAGATTTGTTTTTGGTTTTGTTCATGTTGATTTGTAACAAAAGAATCAAGAATGTGGTGTGGGGTAAAGCTAGCTCCATGTGCATAAGTTTTCTTCTGTCTTAGCTCCTTGTATAGTTACTGCGAAATAGAACGAATGACATACAATGATACAACGGGGAAATAAATAAATAAATAACT]

[+] EMBL AU225482             [GCCGCTAAAAAACTCTCCTCTCATTTCAGAGGAATAAATCCTCGTTGATCGATTGCTTGCCTTCTATGCGATCTTGTTCGTTGCTTGCGGCTTTAATTCATCCATCAATCGATTGATCTCTGAACTTTCTGAGAAGCAGAGAGGAGGTAGCTTGACAGCAGCTGCTTCTCGCATGTACAAGAAGAAGAAGCTGAGGTTCTTAGCCACCGTCGTCATCGCTGCTGCATCACATGGGCGGCGTGATCGGAGCGTTATTCCGCGGTGGTGGTCACCGTCGTGAGATGCACAGAGCGCCGATGAACCAGCCGGGATACGGCGGCGGCGGCGAGAACCACCGGAGGGCGATGCTGACCAAGAAGTACTCGTACATACCTGACAACTACCAGTCTCTCGATCAGGTGACAGCGGCTCTGCGAGATCAAGGGCTCGAGTCGTCGAACCTGATACTTGGCATAGACTTCACCAAGAGCCACGAATGGACAGGGGAAGCGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK072961             [   GCAAAAAAACTCTCCTCTCATTTCAGAGGAATAAATCCTCGTTGATCGATTGCTTGCCTTCTATGCGATCTTGTTCGTTGCTTGCGGCTTTAATTCATCCATCAATCGATTGATCTCTGAACTTTCTGAGAAGCAGAGAGGAGGTAGCTTGACAGCAGCTGCTTCTCGCATGTACAAGAAGAAGAAGCTGAGGTTCTTAGCCACCGTCGTCATCGCTGCTGCATCACATGGGCGGCGTGATCGGAGCGTTATTCCGCGGTGGTGGTCACCGTCGTGAGATGCACAGAGCGCCGATGAACCAGCCGGGATACGGCGGCGGCGGCGAGAACCACCGGAGGGCGATGCTGACCAAGAAGTACTCGTACATACCTGACAACTACCAGTCTCTCGATCAGGTGACAGCGGCTCTGCGAGATCAAGGGCTCGAGTCGTCGAACCTGATACTTGGCATAGACTTCACCAAGAGCAACGAATGGACA GGGAAGCGTTCGTTCAGTGGGCAGAGCCTGCACAAGATAGGCAGCACACCAAATCCATATGAGCAAGCCATCAGCATCATCGGCAAGACATTGGCACCTTTCGACGATGATAATCTCATCCCATGCTTTGGCTTCGGCGACGCAACCACACATGACTACAATGTGTTCAGCTTCCATCCTGACAACTCACCCTGCCATGGATTCGAGGAGGTCCTATCATGCTACAAGAAGATTGTGCCACACCTCAGGCTATCTGGGCCTACCTCTTTCGCGCCGATCGTCGAGGCGGCCGTCGACATTGTTGACAGGAGTGGAGGACAGTATCATGTTCTTGTCATCGTTGCTGATGGACAGGTGACTAGGAGTGTTGATACAAGCGATAATGATCTGAGCCCCCAGGAGAGGAGGACAGTGGACTCCGTTGTCATGGCAAGCTCCTACCCTCTATCCATTGTTCTTGTTGGAGTTGGAGATGGCCCATGGGAAGACATGCAGAAGTTCGACGACAAGATCCCGGCTCGCCAGTTCGACAACTTTCAGTTTGTGAACTTCACGTCGATCATGTCGAGGAGCACGACGCAGCAGCAGAAAGAGTCGGCGTTCGCCTTGGCGGCTCTCATGGAGGTGCCCATCCAATACAAGGCCACCATGGAGCTCGGCATCCTAGGCCGGTCGACGGGGAAGGCTAAGAGGATCATGCCTGCTCCGCCGCCGCTGCCGTCGGCGGCGGGGAGGCAGCCATCGCTGAGGAGGGAAGACAGCGCCGCCGCCACCGCTGCCGCCGCCCCACCGTCACCAAGAGAGGATCAAGTGTGCCCAATCTGCCTGACCAATGCCAAGGACTTGGCATTTGGGTGTGGCCACATGTGCTGCAGGGAATGTGGGGAGAGCCTGACCAAATGCCCAATTTGTCGACAGACGATTCGGTCCAAGCTGAGGCTGTACTCAGGATGATCAAATGCTTATGGACTGATGGAATGGAGCTTAAATCTGTTCTTAATGTACAGAATGCATGAACATATCGTTTGTGAGAAATACTCAAATCAAATGCATGCATTGGATTTGTGCTGCGAGATAGGGGACCAAACGAATGATTAGATTTGTTTTTGGTTTTGTTCATGTTGATTTGTAACAAAAGAATCAAGAATGT                                                                                                                            ]
[+] EMBL AK064276             [              CTCCTCTCATTTCAGAGGAATAAATCCTCGTTGATCGATTGCTTGCCTTCTATGCGATCTTGTTCGTTGCTTGCGGCTTTAATTCATCCATCAATCGATTGATCTCTGAACTTTCTGAGAAGCAGAGAGGAGGTAGCTTGACAGCAGCTGCTTCTCGCATGTACAAGAAGAAGAAGCTGAGGTTCTTAGCCACCGTCGTCATCGCTGCTGCATCACATGGGCGGCGTGATCGGAGCGTTATTCCGCGGTGGTGGTCACCGTCGTGAGATGCACAGAGCGCCGATGAACCAGCCGGGATACGGCGGCGGCGGCGAGAACCACCGGAGGGCGATGCTGACCAAGAAGTACTCGTACATACCTGACAACTACCAGTCTCTCGATCAGGTGACAGCGGCTCTGCGAGATCAAGGGCTCGAGTCGTCGAACCTGATACTTGGCATAGACTTCACCAAGAGCAACGAATGGACA GGGAAGCGTTCGTTCAGTGGGCAGAGCCTGCACAAGATAGGCAGCACACCAAATCCATATGAGCAAGCCATCAGCATCATCGGCAAGACATTGGCACCTTTCGACGATGATAATCTCATCCCATGCTTTGGCTTCGGCGACGCAACCACACATGACTACAATGTGTTCAGCTTCCATCCTGACAACTCACCCTGCCATGGATTCGAGGAGGTCCTATCATGCTATAAGGAGATTGTGCCACACCTCAGGCTATCTGGGCCTACCTCTTTCGCGCCGATCGTCGAGGCGGCCGTCGACATTGTTGACAGGAGTGGAGGACAGTATCATGTTCTTGTCATCGTTGCTGATGGACAGGTGACTAGGAGTGTTGATACAAGCGATAATGATCTGAGCCCCCAGGAGAGGAGGACAGTGGACTCCGTTGTCATGGCAAGCTCCTACCCTCTATCCATTGTTCTTGTTGGAGTTGGAGATGGCCCATGGGAAGACATGCAGAAGTTCGACGACAAGATCCCGGCTCGCCAGTTCGACAACTTTCAGTTTGTGAACTTCACGTCGATCATGTCGGGGAGCACGACGCAGCAGCAGAAAGAGTCGGCGTTCGCCTTGGCGGCTCTCATGGAGGTGCCCATCCAATACAAGGCCACCATGGAGCTCGGCATCCTAGGCCGGTCGACGGGGAAGGCTAAGAGGATCATGCCTGCTCCGCCGCCGCTGCCGTCGGCGGCGGGGAGGCAGCCATCGCTGAGGAGGGAAGACAGCGCCGCCGCCACCGCTGCCGCCGCCCCACCGTCACCAAGAGAGGATCAAGTGTGCCCAATCTGCCTGACCAATGCCAAGGACTTGGCATTTGGGTGTGG CACATGTGCTGCAGGGAATGTGGGGAGAGCCTGACCAAATGCCCAATTTGTCGACAGACGATTCGGTCCAAGCTGAGGCTGTACTCAGGATGATCAAATGCTTATGGACTGATGGAATGGAGCTTAAATCTGTTCTTAATGTACAGAATGCATGAACATATCGTTTGTGAGAAATACTCAAATCAAATGCATGCATTGGATTTGTGCTGCGAGATAGGGGACCAAACGAATGATTAGATTTGTTTTTGGTTTTGTTCATGTTGATTTGTAACAAAAGAATCAAGAATGTGGTGTGGGGTAAAGCTAGCTCCATGTGCATAAGTTTTCTTCTGTCTTAGCTCCTTGTATAGTTACTGCGAAATAGAACGAATGACATACAATGATACAACGGGGAAATAAATAAATAAATAACT]
[+] EMBL OSC9701              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGTTCTTAATGTACAGAATGCATGAACATATCGTTTGTGAGAAATACTCAAATCAAATGCATGCATTGGATTTGTGCTGCGAGATAGGGGACCAAACGAATGATTAGATTTGTTTTTGGTTTTGTTCATGTTGATTTGTAACAAAAGAATCAAGAATGTGGTGTGGGGTAAAGCTAGCTCCATGTGCATAAGTTTTCTTCTGTCTTAGC                                                                          ]


>consensus_7367#0 GCCGCTAAAAAACTCTCCTCTCATTTCAGAGGAATAAATCCTCGTTGATCGATTGCTTGC CTTCTATGCGATCTTGTTCGTTGCTTGCGGCTTTAATTCATCCATCAATCGATTGATCTC TGAACTTTCTGAGAAGCAGAGAGGAGGTAGCTTGACAGCAGCTGCTTCTCGCATGTACAA GAAGAAGAAGCTGAGGTTCTTAGCCACCGTCGTCATCGCTGCTGCATCACATGGGCGGCG TGATCGGAGCGTTATTCCGCGGTGGTGGTCACCGTCGTGAGATGCACAGAGCGCCGATGA ACCAGCCGGGATACGGCGGCGGCGGCGAGAACCACCGGAGGGCGATGCTGACCAAGAAGT ACTCGTACATACCTGACAACTACCAGTCTCTCGATCAGGTGACAGCGGCTCTGCGAGATC AAGGGCTCGAGTCGTCGAACCTGATACTTGGCATAGACTTCACCAAGAGCAACGAATGGA CAGGGAAGCGTTCGTTCAGTGGGCAGAGCCTGCACAAGATAGGCAGCACACCAAATCCAT ATGAGCAAGCCATCAGCATCATCGGCAAGACATTGGCACCTTTCGACGATGATAATCTCA TCCCATGCTTTGGCTTCGGCGACGCAACCACACATGACTACAATGTGTTCAGCTTCCATC CTGACAACTCACCCTGCCATGGATTCGAGGAGGTCCTATCATGCTACAAGAAGATTGTGC CACACCTCAGGCTATCTGGGCCTACCTCTTTCGCGCCGATCGTCGAGGCGGCCGTCGACA TTGTTGACAGGAGTGGAGGACAGTATCATGTTCTTGTCATCGTTGCTGATGGACAGGTGA CTAGGAGTGTTGATACAAGCGATAATGATCTGAGCCCCCAGGAGAGGAGGACAGTGGACT CCGTTGTCATGGCAAGCTCCTACCCTCTATCCATTGTTCTTGTTGGAGTTGGAGATGGCC CATGGGAAGACATGCAGAAGTTCGACGACAAGATCCCGGCTCGCCAGTTCGACAACTTTC AGTTTGTGAACTTCACGTCGATCATGTCGAGGAGCACGACGCAGCAGCAGAAAGAGTCGG CGTTCGCCTTGGCGGCTCTCATGGAGGTGCCCATCCAATACAAGGCCACCATGGAGCTCG GCATCCTAGGCCGGTCGACGGGGAAGGCTAAGAGGATCATGCCTGCTCCGCCGCCGCTGC CGTCGGCGGCGGGGAGGCAGCCATCGCTGAGGAGGGAAGACAGCGCCGCCGCCACCGCTG CCGCCGCCCCACCGTCACCAAGAGAGGATCAAGTGTGCCCAATCTGCCTGACCAATGCCA AGGACTTGGCATTTGGGTGTGGCCACATGTGCTGCAGGGAATGTGGGGAGAGCCTGACCA AATGCCCAATTTGTCGACAGACGATTCGGTCCAAGCTGAGGCTGTACTCAGGATGATCAA ATGCTTATGGACTGATGGAATGGAGCTTAAATCTGTTCTTAATGTACAGAATGCATGAAC ATATCGTTTGTGAGAAATACTCAAATCAAATGCATGCATTGGATTTGTGCTGCGAGATAG GGGACCAAACGAATGATTAGATTTGTTTTTGGTTTTGTTCATGTTGATTTGTAACAAAAG AATCAAGAATGTGGTGTGGGGTAAAGCTAGCTCCATGTGCATAAGTTTTCTTCTGTCTTA GCTCCTTGTATAGTTACTGCGAAATAGAACGAATGACATACAATGATACAACGGGGAAAT AAATAAATAAATAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)