Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7432 cluster # 7432       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7432#0 length = 1569 sequences # 4  

consensusID : consensus_7432#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1569
fasta sequence
                              [TCCTGATCAACCACGCTGAACTCCGGCGGCGCGACATTGCCACCGCCGGCGGCGGCGGCGGCGGCGGCGACGGCGCGTGCGCGACGGCCGTGGCGCCGTTCGGCTACCCCTGCGAAGAGCACGAGGTGACGACGCAGGATGGCTACATCCTGGGCTTGCAAAGGATCCCGAGGGGACGCATCGGCGGCGTCACCGGCGGCGGCGCGGCGGCGGCGCGGCAGCCGGTGCTACTGCAGCACGGTGTACTCGTGGATGGCATGACATGGCTGCTGGGGTCGCCGGAGGAGTCGCTGCCGTACATCTTGGCCGACCAGGGCTTCGACGTCTGGATCGCCAACAACAGGGGGACCCGCTGGAGCAGCCGCCACGTCTCACTCGATCCCAAAAGCCGGAGCTACTGGAACTGGTCATGGGACGACATCGTGGTCAACGACATGCCTGCAATCGTTGACTACGTTTGCAGCCACACCGGCCAGAAGCCACACTACGTTGGCCATTCAATGGGGACGCTGGTGGCGCTTGCAGCTTTCTCCGAAGGCAGGATGGTTGACAAGCTGAAATCAGCTGCGCTGCTCAGCCCTGTCGCGTATCTGTCTCACATTACCACTCCCATTGGCGTTGTGTTAGCTAAAGCATTCGCTGGAGAGCTCATCTCTGATCTCCTTGGCATCGCCGAGTTCAACCCAGCATCGCCTCAAGTGTCCAACTTGGTTAGAACGTTCTGTCGTAAGCCCGGGATGAACTGCTACGATCTCCTCACATCTTTCACTGGAAAAAACTATTGTCTGAACAATTCAGCAGCCGACATCTTCCTCAAGTACGAGCCCCAGCCAACGTCCACAAAAACCTTGATCCATCTCGCTCAAACGGTGAGAGACGGGGTTCTGACCAAGTACGACTACGTGATGCCGGACGCGAACGTGGCCAGGTACGGGCAGGCCGACCCGCCGGCGTACGACATGGCGGCGATCCCGGCGTGGTTCCCCATCTTCCTCAGCTACGGCGGCCGGGACTCGCTGTCCGACCCCGCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCGACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCTGCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAAAGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGATTAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATATACAGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTTACAATAGAATAAGATATAGAGAGATGGCATTTGGGCCATATCGATTTTTTTTAATTTTTTCTAAGATACTTATATGTGGCAATGCGGGTCCTGCCTATTTTAATTTTATTTTTTTTTTCCAAACTATGAATGCCATGTAAACGTTACATAGGCGCTGCGATACATAAACGACCAGGTCTAAGTGCTAAGCAAGCGCCTCGTAGCATG]

[+] EMBL AK107138             [TCCTGATCAACCACGCTGAACTCCGGCGGCGCGACATTGCCACCGCCGGCGGCGGCGGCGGCGGCGGCGACGGCGCGTGCGCGACGGCCGTGGCGCCGTTCGGCTACCCCTGCGAAGAGCACGAGGTGACGACGCAGGATGGCTACATCCTGGGCTTGCAAAGGATCCCGAGGGGACGCATCGGCGGCGTCACCGGCGGCGGCGCGGCGGCGGCGCGGCAGCCGGTGCTACTGCAGCACGGTGTACTCGTGGATGGCATGACATGGCTGCTGGGGTCGCCGGAGGAGTCGCTGCCGTACATCTTGGCCGACCAGGGCTTCGACGTCTGGATCGCCAACAACAGGGGGACCCGCTGGAGCAGCCGCCACGTCTCACTCGATCCCAAAAGCCGGAGCTACTGGAACTGGTCATGGGACGACATCGTGGTCAACGACATGCCTGCAATCGTTGACTACGTTTGCAGCCACACCGGCCAGAAGCCACACTACGTTGGCCATTCAATGGGGACGCTGGTGGCGCTTGCAGCTTTCTCCGAAGGCAGGATGGTTGACAAGCTGAAATCAGCTGCGCTGCTCAGCCCTGTCGCGTATCTGTCTCACATTACCACTCCCATTGGCGTTGTGTTAGCTAAAGCATTCGCTGGAGAGCTCATCTCTGATCTCCTTGGCATCGCCGAGTTCAACCCAGCATCGCCTCAAGTGTCCAACTTGGTTAGAACGTTCTGTCGTAAGCCCGGGATGAACTGCTACGATCTCCTCACATCTTTCACTGGAAAAAACTATTGTCTGAACAATTCAGCAGCCGACATCTTCCTCAAGTACGAGCCCCAGCCAACGTCCACAAAAACCTTGATCCATCTCGCTCAAACGGTGAGAGACGGGGTTCTGACCAAGTACGACTACGTGATGCCGGACGCGAACGTGGCCAGGTACGGGCAGGCCGACCCGCCGGCGTACGACATGGCGGCGATCCCGGCGTGGTTCCCCATCTTCCTCAGCTACGGCGGCCGGGACTCGCTGTCCGACCCCGCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCGACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCTGCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAAAGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGATTAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATATACAGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTT                                                                                                                                                                                                               ]
[+] EMBL CF304477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCGACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCTGCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAAAGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGATTAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATATACAGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTTACAATAGAATAAGATATAGAGAGATGGCATTTGGGCCATATCGATTTTTTTTAATTTTTTCTAAGATACTTATATGTGGCAATGCGGGTCCTGCCTATTNTAATTTTATTTTTTTTTTCCAAACTATGAATGCCATGTAAACGTTACATAGGCGCTGCGATACATAAACGACCAGGTCTAAGTGCTAAGCAAGCGCCTCGTAGCATG]
[+] EMBL CF304088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCGACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCTGCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAAAGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGATTAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATATACAGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTTACAATAGAATAAGATATAGAGAGATGGCATTTGGGCCATATCGATTTTTTTTAATTTTTTCTAAGATACTTATATGTGGCAATGCGGGTCCTGCCTATTTTAATTTTATTTTTTTTTTCCAAACTATGAATGCCATGTAAACGTTACATAGGCGCTGCGATACATAAACGACCAGGTCTAAGTGCTAAGCAAGCGCCTCGTAGCA  ]
[+] EMBL CF305073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCGACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCTGCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAAAGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGATTAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATCTACAGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTTACAATAGAATAAGATATAGAGAGATGGCATTTGGGCCATATCGATTTTTTTTAATTTTTTCTAAGATACTTATATGTGGCAATGCGGGTCCTGCCTATTTTAATTTT                                                                                                    ]


>consensus_7432#0 TCCTGATCAACCACGCTGAACTCCGGCGGCGCGACATTGCCACCGCCGGCGGCGGCGGCG GCGGCGGCGACGGCGCGTGCGCGACGGCCGTGGCGCCGTTCGGCTACCCCTGCGAAGAGC ACGAGGTGACGACGCAGGATGGCTACATCCTGGGCTTGCAAAGGATCCCGAGGGGACGCA TCGGCGGCGTCACCGGCGGCGGCGCGGCGGCGGCGCGGCAGCCGGTGCTACTGCAGCACG GTGTACTCGTGGATGGCATGACATGGCTGCTGGGGTCGCCGGAGGAGTCGCTGCCGTACA TCTTGGCCGACCAGGGCTTCGACGTCTGGATCGCCAACAACAGGGGGACCCGCTGGAGCA GCCGCCACGTCTCACTCGATCCCAAAAGCCGGAGCTACTGGAACTGGTCATGGGACGACA TCGTGGTCAACGACATGCCTGCAATCGTTGACTACGTTTGCAGCCACACCGGCCAGAAGC CACACTACGTTGGCCATTCAATGGGGACGCTGGTGGCGCTTGCAGCTTTCTCCGAAGGCA GGATGGTTGACAAGCTGAAATCAGCTGCGCTGCTCAGCCCTGTCGCGTATCTGTCTCACA TTACCACTCCCATTGGCGTTGTGTTAGCTAAAGCATTCGCTGGAGAGCTCATCTCTGATC TCCTTGGCATCGCCGAGTTCAACCCAGCATCGCCTCAAGTGTCCAACTTGGTTAGAACGT TCTGTCGTAAGCCCGGGATGAACTGCTACGATCTCCTCACATCTTTCACTGGAAAAAACT ATTGTCTGAACAATTCAGCAGCCGACATCTTCCTCAAGTACGAGCCCCAGCCAACGTCCA CAAAAACCTTGATCCATCTCGCTCAAACGGTGAGAGACGGGGTTCTGACCAAGTACGACT ACGTGATGCCGGACGCGAACGTGGCCAGGTACGGGCAGGCCGACCCGCCGGCGTACGACA TGGCGGCGATCCCGGCGTGGTTCCCCATCTTCCTCAGCTACGGCGGCCGGGACTCGCTGT CCGACCCCGCCGACGTCGCCCTCCTCCTCGACGACCTCCGCCGCGGCGGCCACGCCGGCG ACCGGCTCACCGTGCAGTACCTTCCCCAGCTCGCCCACGCCGACTTCGTCATCGGCGTCT GCGCCAAGGACCTTGTCTACAACGACGTCATCTCCTTCTTCCGTCGATTTCACTAAAAAA AGGGAAAGAACTGAATAAATCAAAACAAAATATAGCTGGCATATATTCACTAGTAGTGAT TAAGTAGCTAATTAATTTGGAGGTCTGAGAAAATTATATATACTAGTATAGTTGATATAC AGTTACATGAAAGATGATAAATGGAAATGGGACCAAAATTTTACAATAGAATAAGATATA GAGAGATGGCATTTGGGCCATATCGATTTTTTTTAATTTTTTCTAAGATACTTATATGTG GCAATGCGGGTCCTGCCTATTTTAATTTTATTTTTTTTTTCCAAACTATGAATGCCATGT AAACGTTACATAGGCGCTGCGATACATAAACGACCAGGTCTAAGTGCTAAGCAAGCGCCT CGTAGCATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)