These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7477#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2085 fasta sequence [CGGGGCCTACGTAACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGACATGGATTTGTCAGGGGAAGAGCACGTGCCAAAGGCGCGAAAGCCGTACACGATCACGAAGCAGCGCGAGAAGTGGACGGACGAGGAGCACAGGCTGTTCTTGGAAGCCCTGCAGCTGCACGGCCGCGCATGGCGCCGTATACAAGAGCACATAGGTACCAAGACTGCCGTGCAAATCCGTAGCCACGCGCAGAAGTTCTTCTCTAAGGTCGTCAGAGAATCTTCGGGGAGTAACACCGGCTCGGGCGGCGCGTCCGCCGCGGCGGCGGCGGCGGCCATCCAGATCCCTCCGCCGCGGCCGAAGAGGAAGCCGGCGCACCCGTACCCGCGCAAGGTGGACGGCGCGGCCAAGAAGCACGTCCCGGCGCTCAGGCAGCTGGAGAAGCCGCCGTTGTGGATGCAGTCCCTGTCCGAGCAGGAGGAGGGCTCGCCGACGTCGGTGCTGACGGCGGCGCAGGTAGGCACCGAGGCCCTGGGCGGTGGGTTCTCGAATAACTCGAGCGGCAGCGGGTCGCTGGCTCCGTCAGCCGCCGGTACGGATGAGCATGTCGACGGTGGCGGCTCGCCGGCGTCGTCGGTGGACAGAGAGGACGGGTGCCTCTCACCGAGCATCCCGACTGCTGAGTTGGCTATGCAGGCGCCAAATACTAAGATGTCAATTGCAACCACGGATGCCAAAGAAGCATCCTCAGAAGCATCAGTCTTCAGGCTATTCGGAAAGAGCGTAGTGGTTAAGGATTCAGACCAGCTGCACCTGCTTAATGGCAGTAACATTGCAACGAGTGGTTCAGTTGAGAGAGCAACCAGAAACATACTAGTACCTTCTTTTGCTGCTGCCCCAGAAGGGAGCTCGTCGAATCCATGGCCGAGCAGCATGCAACAGTTTCTCTACTTCCTTCCTCGATCGGATGGTTTCGCCGCGCAACCTGTCATGCCATGGTTGAGCTACAACGGGAGCCTTCCATGCGCGCTGTTCTACCCGGCGGCGGCGGCGGCTGCGAACCAGCAGTGCCACCGTGATTCAGAGGGCGTAGAGTTCAGAGTCTCGCAGAGGGAAGGATCGCTGACGGGCTCGAACACGGCCTCCAGCGTCGTGCTTGGATCGTCGGCGGCGGTACCGGCGGCGGCGGCGGCGGCTCAGAATTCGGACGTCGCGGAGTCCCGTGGCCAAGGGAACAGCAGGGAGGCGGCGGCCTCGCCACGGCCGACCAAGTGCGAGAGCTCGGCGTCCGTCACCCTGCTGCAGAGGGGCTTCATGCCGTACAAGAGGTGCGCGGCGGAGAGCGAGCTGCTGCGATCGGAGGCCGCCGGAGGAGAGGAGGCCGTCGCCGACGGTGAGCTGACAAGGCTGTGCTTGTGACAACTGACTCGTCGCACGGACACGTCACGCCACAGTACTTCTATTCGTAGGTGACAAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCACTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATATAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTACTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAATGTTGGATGCAAAAAAAAAAA] [+] EMBL AK111726 [CGGGGCCTACGTAACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGACATGGATTTGTCAGGGGAAGAGCACGTGCCAAAGGCGCGAAAGCCGTACACGATCACGAAGCAGCGCGAGAAGTGGACGGACGAGGAGCACAGGCTGTTCTTGGAAGCCCTGCAGCTGCACGGCCGCGCATGGCGCCGTATACAAGAGCACATAGGTACCAAGACTGCCGTGCAAATCCGTAGCCACGCGCAGAAGTTCTTCTCTAAGGTCGTCAGAGAATCTTCGGGGAGTAACACCGGCTCGGGCGGCGCGTCCGCCGCGGCGGCGGCGGCGGCCATCCAGATCCCTCCGCCGCGGCCGAAGAGGAAGCCGGCGCACCCGTACCCGCGCAAGGTGGACGGCGCGGCCAAGAAGCACGTCCCGGCGCTCAGGCAGCTGGAGAAGCCGCCGTTGTGGATGCAGTCCCTGTCCGAGCAGGAGGAGGGCTCGCCGACGTCGGTGCTGACGGCGGCGCAGGTAGGCACCGAGGCCCTGGGCGGTGGGTTCTCGAATAACTCGAGCGGCAGCGGGTCGCTGGCTCCGTCAGCCGCCGGTACGGATGAGCATGTCGACGGTGGCGGCTCGCCGGCGTCGTCGGTGGACAGAGAGGACGGGTGCCTCTCACCGAGCATCCCGACTGCTGAGTTGGCTATGCAGGCGCCAAATACTAAGATGTCAATTGCAACCACGGATGCCAAAGAAGCATCCTCAGAAGCATCAGTCTTCAGGCTATTCGGAAAGAGCGTAGTGGTTAAGGATTCAGACCAGCTGCACCTGCTTAATGGCAGTAACATTGCAACGAGTGGTTCAGTTGAGAGAGCAACCAGAAACATACTAGTACCTTCTTTTGCTGCTGCCCCAGAAGGGAGCTCGTCGAATCCATGGCCGAGCAGCATGCAACAGTTTCTCTACTTCCTTCCTCGATCGGATGGTTTCGCCGCGCAACCTGTCATGCCATGGTTGAGCTACAACGGGAGCCTTCCATGCGCGCTGTTCTACCCGGCGGCGGCGGCGGCTGCGAACCAGCAGTGCCACCGTGATTCAGAGGGCGTAGAGTTCAGAGTCTCGCAGAGGGAAGGATCGCTGACGGGCTCGAACACGGCCTCCAGCGTCGTGCTTGGATCGTCGGCGGCGGTACCGGCGGCGGCGGCGGCGGCTCAGAATTCGGACGTCGCGGAGTCCCGTGGCCAAGGGAACAGCAGGGAGGCGGCGGCCTCGCCACGGCCGACCAAGTGCGAGAGCTCGGCGTCCGTCACCCTGCTGCAGAGGGGCTTCATGCCGTACAAGAGGTGCGCGGCGGAGAGCGAGCTGCTGCGATCGGAGGCCGCCGGAGGAGAGGAGGCCGTCGCCGACGGTGAGCTGACAAGGCTGTGCTTGTGACAACTGACTCGTCGCACGGACACGTCACGCCACAGTACTTCTATTCGTAGGTGACAAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCACTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATATAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTACTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAA ] [+] EMBL C72927 [ ACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTCCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACG AAACGGTGCCGACGATCGCGCCGGCGGNAANACCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGANATGGATT ] [+] EMBL AU182354 [ ACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGNATCATCTGANGAGCCATAT ] [+] EMBL AU094108 [ nTCGCCGACGGTGANCTGACAAGGCTNTGCTTGTGACAANTGACTCGTCGCACGGACACGTCACGCCACAGTACTACTATNCGTAGGTGACNAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCNCTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATNTAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTANTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAATGTTGGATGCAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||