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Oryza sativa
cluster # 7477 cluster # 7477       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7477#0 length = 2085 sequences # 4  

consensusID : consensus_7477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2085
fasta sequence
                              [CGGGGCCTACGTAACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGACATGGATTTGTCAGGGGAAGAGCACGTGCCAAAGGCGCGAAAGCCGTACACGATCACGAAGCAGCGCGAGAAGTGGACGGACGAGGAGCACAGGCTGTTCTTGGAAGCCCTGCAGCTGCACGGCCGCGCATGGCGCCGTATACAAGAGCACATAGGTACCAAGACTGCCGTGCAAATCCGTAGCCACGCGCAGAAGTTCTTCTCTAAGGTCGTCAGAGAATCTTCGGGGAGTAACACCGGCTCGGGCGGCGCGTCCGCCGCGGCGGCGGCGGCGGCCATCCAGATCCCTCCGCCGCGGCCGAAGAGGAAGCCGGCGCACCCGTACCCGCGCAAGGTGGACGGCGCGGCCAAGAAGCACGTCCCGGCGCTCAGGCAGCTGGAGAAGCCGCCGTTGTGGATGCAGTCCCTGTCCGAGCAGGAGGAGGGCTCGCCGACGTCGGTGCTGACGGCGGCGCAGGTAGGCACCGAGGCCCTGGGCGGTGGGTTCTCGAATAACTCGAGCGGCAGCGGGTCGCTGGCTCCGTCAGCCGCCGGTACGGATGAGCATGTCGACGGTGGCGGCTCGCCGGCGTCGTCGGTGGACAGAGAGGACGGGTGCCTCTCACCGAGCATCCCGACTGCTGAGTTGGCTATGCAGGCGCCAAATACTAAGATGTCAATTGCAACCACGGATGCCAAAGAAGCATCCTCAGAAGCATCAGTCTTCAGGCTATTCGGAAAGAGCGTAGTGGTTAAGGATTCAGACCAGCTGCACCTGCTTAATGGCAGTAACATTGCAACGAGTGGTTCAGTTGAGAGAGCAACCAGAAACATACTAGTACCTTCTTTTGCTGCTGCCCCAGAAGGGAGCTCGTCGAATCCATGGCCGAGCAGCATGCAACAGTTTCTCTACTTCCTTCCTCGATCGGATGGTTTCGCCGCGCAACCTGTCATGCCATGGTTGAGCTACAACGGGAGCCTTCCATGCGCGCTGTTCTACCCGGCGGCGGCGGCGGCTGCGAACCAGCAGTGCCACCGTGATTCAGAGGGCGTAGAGTTCAGAGTCTCGCAGAGGGAAGGATCGCTGACGGGCTCGAACACGGCCTCCAGCGTCGTGCTTGGATCGTCGGCGGCGGTACCGGCGGCGGCGGCGGCGGCTCAGAATTCGGACGTCGCGGAGTCCCGTGGCCAAGGGAACAGCAGGGAGGCGGCGGCCTCGCCACGGCCGACCAAGTGCGAGAGCTCGGCGTCCGTCACCCTGCTGCAGAGGGGCTTCATGCCGTACAAGAGGTGCGCGGCGGAGAGCGAGCTGCTGCGATCGGAGGCCGCCGGAGGAGAGGAGGCCGTCGCCGACGGTGAGCTGACAAGGCTGTGCTTGTGACAACTGACTCGTCGCACGGACACGTCACGCCACAGTACTTCTATTCGTAGGTGACAAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCACTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATATAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTACTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAATGTTGGATGCAAAAAAAAAAA]

[+] EMBL AK111726             [CGGGGCCTACGTAACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGACATGGATTTGTCAGGGGAAGAGCACGTGCCAAAGGCGCGAAAGCCGTACACGATCACGAAGCAGCGCGAGAAGTGGACGGACGAGGAGCACAGGCTGTTCTTGGAAGCCCTGCAGCTGCACGGCCGCGCATGGCGCCGTATACAAGAGCACATAGGTACCAAGACTGCCGTGCAAATCCGTAGCCACGCGCAGAAGTTCTTCTCTAAGGTCGTCAGAGAATCTTCGGGGAGTAACACCGGCTCGGGCGGCGCGTCCGCCGCGGCGGCGGCGGCGGCCATCCAGATCCCTCCGCCGCGGCCGAAGAGGAAGCCGGCGCACCCGTACCCGCGCAAGGTGGACGGCGCGGCCAAGAAGCACGTCCCGGCGCTCAGGCAGCTGGAGAAGCCGCCGTTGTGGATGCAGTCCCTGTCCGAGCAGGAGGAGGGCTCGCCGACGTCGGTGCTGACGGCGGCGCAGGTAGGCACCGAGGCCCTGGGCGGTGGGTTCTCGAATAACTCGAGCGGCAGCGGGTCGCTGGCTCCGTCAGCCGCCGGTACGGATGAGCATGTCGACGGTGGCGGCTCGCCGGCGTCGTCGGTGGACAGAGAGGACGGGTGCCTCTCACCGAGCATCCCGACTGCTGAGTTGGCTATGCAGGCGCCAAATACTAAGATGTCAATTGCAACCACGGATGCCAAAGAAGCATCCTCAGAAGCATCAGTCTTCAGGCTATTCGGAAAGAGCGTAGTGGTTAAGGATTCAGACCAGCTGCACCTGCTTAATGGCAGTAACATTGCAACGAGTGGTTCAGTTGAGAGAGCAACCAGAAACATACTAGTACCTTCTTTTGCTGCTGCCCCAGAAGGGAGCTCGTCGAATCCATGGCCGAGCAGCATGCAACAGTTTCTCTACTTCCTTCCTCGATCGGATGGTTTCGCCGCGCAACCTGTCATGCCATGGTTGAGCTACAACGGGAGCCTTCCATGCGCGCTGTTCTACCCGGCGGCGGCGGCGGCTGCGAACCAGCAGTGCCACCGTGATTCAGAGGGCGTAGAGTTCAGAGTCTCGCAGAGGGAAGGATCGCTGACGGGCTCGAACACGGCCTCCAGCGTCGTGCTTGGATCGTCGGCGGCGGTACCGGCGGCGGCGGCGGCGGCTCAGAATTCGGACGTCGCGGAGTCCCGTGGCCAAGGGAACAGCAGGGAGGCGGCGGCCTCGCCACGGCCGACCAAGTGCGAGAGCTCGGCGTCCGTCACCCTGCTGCAGAGGGGCTTCATGCCGTACAAGAGGTGCGCGGCGGAGAGCGAGCTGCTGCGATCGGAGGCCGCCGGAGGAGAGGAGGCCGTCGCCGACGGTGAGCTGACAAGGCTGTGCTTGTGACAACTGACTCGTCGCACGGACACGTCACGCCACAGTACTTCTATTCGTAGGTGACAAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCACTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATATAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTACTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAA                     ]
[+] EMBL C72927               [             ACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTCCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACG AAACGGTGCCGACGATCGCGCCGGCGGNAANACCACCGTGGATCATCTCAGGAGCCATATGAACTACGGCGANATGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU182354             [             ACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCCCCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTGGGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGAGGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGACGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGNATCATCTGANGAGCCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU094108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       nTCGCCGACGGTGANCTGACAAGGCTNTGCTTGTGACAANTGACTCGTCGCACGGACACGTCACGCCACAGTACTACTATNCGTAGGTGACNAATAACAAATCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAGACCNCTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATNTAGTATTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTANTTTGCCTGTAATTTTATCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGAATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACAAAATGCAATGGAAAGACGAGGAAATGTTGGATGCAAAAAAAAAAA]


>consensus_7477#0 CGGGGCCTACGTAACGCTCGCTTCTTTGCCTCCTCGTTCCCTTCTCCTCCTCATCTCCCC CCATCTCGTCGTCCTCATCAACAACATCGAGGAGAAAACTCGCAAAGATTGCGGGGTTTG GGAGGCGCTGATTTTTTGGCTTTGGTGTGGCGATCCTGTGGAGTGTGGTTTGGTTTGGGA GGAGTTCGGTTTTTTCAGAATGGAGATGGCCTGTTTGCCGGGAAACGCCATGGCAACCGA CGAAAACGGTGCCGACGATCGCGCCGGCGGCGAGAGCACCGTGGATCATCTCAGGAGCCA TATGAACTACGGCGACATGGATTTGTCAGGGGAAGAGCACGTGCCAAAGGCGCGAAAGCC GTACACGATCACGAAGCAGCGCGAGAAGTGGACGGACGAGGAGCACAGGCTGTTCTTGGA AGCCCTGCAGCTGCACGGCCGCGCATGGCGCCGTATACAAGAGCACATAGGTACCAAGAC TGCCGTGCAAATCCGTAGCCACGCGCAGAAGTTCTTCTCTAAGGTCGTCAGAGAATCTTC GGGGAGTAACACCGGCTCGGGCGGCGCGTCCGCCGCGGCGGCGGCGGCGGCCATCCAGAT CCCTCCGCCGCGGCCGAAGAGGAAGCCGGCGCACCCGTACCCGCGCAAGGTGGACGGCGC GGCCAAGAAGCACGTCCCGGCGCTCAGGCAGCTGGAGAAGCCGCCGTTGTGGATGCAGTC CCTGTCCGAGCAGGAGGAGGGCTCGCCGACGTCGGTGCTGACGGCGGCGCAGGTAGGCAC CGAGGCCCTGGGCGGTGGGTTCTCGAATAACTCGAGCGGCAGCGGGTCGCTGGCTCCGTC AGCCGCCGGTACGGATGAGCATGTCGACGGTGGCGGCTCGCCGGCGTCGTCGGTGGACAG AGAGGACGGGTGCCTCTCACCGAGCATCCCGACTGCTGAGTTGGCTATGCAGGCGCCAAA TACTAAGATGTCAATTGCAACCACGGATGCCAAAGAAGCATCCTCAGAAGCATCAGTCTT CAGGCTATTCGGAAAGAGCGTAGTGGTTAAGGATTCAGACCAGCTGCACCTGCTTAATGG CAGTAACATTGCAACGAGTGGTTCAGTTGAGAGAGCAACCAGAAACATACTAGTACCTTC TTTTGCTGCTGCCCCAGAAGGGAGCTCGTCGAATCCATGGCCGAGCAGCATGCAACAGTT TCTCTACTTCCTTCCTCGATCGGATGGTTTCGCCGCGCAACCTGTCATGCCATGGTTGAG CTACAACGGGAGCCTTCCATGCGCGCTGTTCTACCCGGCGGCGGCGGCGGCTGCGAACCA GCAGTGCCACCGTGATTCAGAGGGCGTAGAGTTCAGAGTCTCGCAGAGGGAAGGATCGCT GACGGGCTCGAACACGGCCTCCAGCGTCGTGCTTGGATCGTCGGCGGCGGTACCGGCGGC GGCGGCGGCGGCTCAGAATTCGGACGTCGCGGAGTCCCGTGGCCAAGGGAACAGCAGGGA GGCGGCGGCCTCGCCACGGCCGACCAAGTGCGAGAGCTCGGCGTCCGTCACCCTGCTGCA GAGGGGCTTCATGCCGTACAAGAGGTGCGCGGCGGAGAGCGAGCTGCTGCGATCGGAGGC CGCCGGAGGAGAGGAGGCCGTCGCCGACGGTGAGCTGACAAGGCTGTGCTTGTGACAACT GACTCGTCGCACGGACACGTCACGCCACAGTACTTCTATTCGTAGGTGACAAATAACAAA TCTGACATGAGATTAAGGCGGGAAGAAGAGGCATGTCCTGCTGTTAGGATGTTGCTCGAG ACCACTTTAGTTTTCCAGAAAATGGAAGAGCAATTCTGGTTTTTACTCGTCGATATAGTA TTGTATAATCTGTAAGATAACAACTTTTGTACTTTTTTTTTTACTTTGCCTGTAATTTTA TCCCCAACTCGAATACGTTCAGAGTTGAGTGGCTGTCAATGTTGCCTTTTATCAACCTGA ATCTCGGACAGGGGTTGCCATAGGCTAACTACATGTAATCTAGGCTTGTATCTCTCCACA AAATGCAATGGAAAGACGAGGAAATGTTGGATGCAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)