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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7532 cluster # 7532       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7532#0 length = 1010 sequences # 4  

consensusID : consensus_7532#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1010
fasta sequence
                              [GCCATGAACCACAACTACGGCAACGACAGAATGGCCGACGACATGGACAGCGACAGCATGGACGACGACGACGACGACGACGAATTTGACGACGACGAAAACGACGACGACATCGGCGGTGGCAAGATGCAGGTGCAGTACGAGACGTCGTCCCATTTCCAACGGCCGCAGCTGCAGAACCAGAACGTCGTCGTCGGCCGGCCAAACGCGAGCGGCGGCGGCGGCGGTGGCGCTCCGACGACACCGGCGGGCCCTCCGCCGCCTGCGGCAACAAGTGGGACGTCATTCTTGGCCTGCGTCCAGTGACGACGACGACGACGACACGACGACATATATACACCAAGAGAAATATGCTCAGGTGGTGGCGATCTCGATCTCGATCTACTATCTCCTGTACCATATGGACCTAGCTAGCTAGCCATCCACTTGCATTCTTTAACTCCTACAACTACACTATATCGATCCCTAGTTAGCATAAGCTCGTTAAAACCTGAAGGCCAAAATTTACTGTTCCTTGCCTAGATTCCAAGTTCCAACAA-CCTGATCTTTTCCGTATATTTCTTCTCCTTTCCTGCACATAACATTATTTATCGTCGTATACACCTTGTACATGTCACACACT-CACCATGTCCATACAAACATAAATGGTATTGGGGGACCTCCTGGAGGGAGAGATCTAGCTAGAGAGAAGATAAAAAGGAGGTGAGATATCTTTGTACATGTGAAGGGTTTTGCGTACGTAGGTACATCTCTGTTTTTCTCTTTAGTGCTGTATTAACAGTCCAGTGCTCAAGTACTACAAGCTACGGCAACCGAGAGAAAGGCATGCATGATCATGCTTCTTTTTTTTGGGTATACTTTCGGATGTTCTTTTTTTTTCTTTTTAGAAATTTTACTGTCTGTTATGTGTTATGCAAGTTTTCTTTGTCATACTGTTGGTGAATTGTACACTTGGTAATTGTAAAATCATTGAGGTTAATATATATGCGGGCATATTAAAAAAAAAAAAA]

[+] EMBL CA999676             [GCCATGAACCACAACTACGGCAACGACAGAATGGCCGACGACATGGACAGCGACAGCATGGACGACGACGACGACGACGACGAATTTGACGACGACGAAAACGACGACGACATCGGCGGTGGCAAGATGCAGGTGCAGTACGAGACGTCGTCCCATTTCCAACGGCCGCAGCTGCAGAACCAGAACGTCGTCGTCGGCCGGCCAAACGCGAGCGGCGGCGGCGGCGGTGGCGCTCCGACGACACCGGCGGGCCCTCCGCCGCCTGCGGCAACAAGTGGGACGTCATTCTTGGCCTGCGTCCAGTGACGACGACGACGACGACACGACGACATATATACACCAAGAGAAATATGCTCAGGTGGTGGCGATCTCGATCTCGATCTACTATCTCCTGTACCATATGGACCTAGCTAGCTAGCCATCCACTTGCATTCTTTAACTCCTACAACTACACTATATCGATCCCTAGTTAGCATAAGCTCGTTAAAACCTGAAGGCCAAAATTTACTGTTCCTTGCCTAGATTCCAAGTTCCAACAA CCTGATCTTTTCCGTATATTTCTTCTCCTTTCCTGCACATAACATTATTTATCGTCGTATACACCTTGTACATGTCACACACT CACCATGTCCATA                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA999455             [GCCATGAACCACAACTACGGCAACGACAGAATGGCCGACGACATGGACAGCGACAGCATGGACGACGACGACGACGACGACGAATTTGACGACGACGAAAACGACGACGACATCGGCGGTGGCAAGATGCAGGTGCAGTACGAGACGTCGTCCCATTTCCAACGGCCGCAGCTGCAGAACCAGAACGTCGTCGTCGGCCGGCCAAACGCGAGCGGCGGCGGCGGCGGTGGCGCTCCGACGACACCGGCGGGCCCTCCGCCGCCTGCGGCAACAAGTGGGACGTCATTCTTGGCCTGCGTCCAGTGACGACGACGACGACGACACGACGACATATATACACCAAGAGAAATATGCTCAGGTGGTGGCGATCTCGATCTCGATCTACTATCTCCTGTACCATATGGACCTAGCTAGCTAGCCATCCACTTGCATTCTTTAACTCCTACAACTACACTATATCGATCCCTAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CF312411             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTCCTTGCCTAGATTCCAAGTTCCAACAACCCTGATCTTTTCCGTATATTTCTTCTCCTTTCCTGCACATAACATTATTTATCGTCGTATACACCTTGTACATGTCACACACTNCACCATGTCCATACAAACATAAATGGTATTGGGGGACCTCCTGGAGGGAGAGATCTAGCTAGAGAGAAGATAAAAAGGAGGTGAGATATCTTTGTACATGTGAAGGGTTTTGCGTACGTAGGTACATCTCTGTTTTTCTCTTTAGTGCTGTATTAACAGTCCAGTGCTCAAGTACTACAAGCTACGGCAACCGAGAGAAAGGCATGCATGATCATGCTTCTTTTTTTTGGGTATACTTTCGGATGTTCTTTTTTTTTCTTTTTAGAAATTTTACTGTCTGTTATGTGTTATGCAAGTTTTCTTTGTCATACTGTTGGTGAATTGTACACTTGGTAATTGTAAAATCATTGAGGTTAATATATATGCGGGCATATTAAAAAAAAAAAAA]
[+] EMBL CA765461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTAGCTAGAGAGAAGATAAAAAGGAGGTGAGATATCTTTGTACATGTGAAGGATTTTGCGTACGTAGGTACATGTCTGTTTTTCTCTCTAGTGCTGTATTAACAGTCCAGTGCTCAAGTACTACAAGCTACGGCAACCGAGAGAAAGGCATGCATGATCATGCTTC TTTTTTTGGGTg                                                                                                                                                           ]


>consensus_7532#0 GCCATGAACCACAACTACGGCAACGACAGAATGGCCGACGACATGGACAGCGACAGCATG GACGACGACGACGACGACGACGAATTTGACGACGACGAAAACGACGACGACATCGGCGGT GGCAAGATGCAGGTGCAGTACGAGACGTCGTCCCATTTCCAACGGCCGCAGCTGCAGAAC CAGAACGTCGTCGTCGGCCGGCCAAACGCGAGCGGCGGCGGCGGCGGTGGCGCTCCGACG ACACCGGCGGGCCCTCCGCCGCCTGCGGCAACAAGTGGGACGTCATTCTTGGCCTGCGTC CAGTGACGACGACGACGACGACACGACGACATATATACACCAAGAGAAATATGCTCAGGT GGTGGCGATCTCGATCTCGATCTACTATCTCCTGTACCATATGGACCTAGCTAGCTAGCC ATCCACTTGCATTCTTTAACTCCTACAACTACACTATATCGATCCCTAGTTAGCATAAGC TCGTTAAAACCTGAAGGCCAAAATTTACTGTTCCTTGCCTAGATTCCAAGTTCCAACAAC CTGATCTTTTCCGTATATTTCTTCTCCTTTCCTGCACATAACATTATTTATCGTCGTATA CACCTTGTACATGTCACACACTCACCATGTCCATACAAACATAAATGGTATTGGGGGACC TCCTGGAGGGAGAGATCTAGCTAGAGAGAAGATAAAAAGGAGGTGAGATATCTTTGTACA TGTGAAGGGTTTTGCGTACGTAGGTACATCTCTGTTTTTCTCTTTAGTGCTGTATTAACA GTCCAGTGCTCAAGTACTACAAGCTACGGCAACCGAGAGAAAGGCATGCATGATCATGCT TCTTTTTTTTGGGTATACTTTCGGATGTTCTTTTTTTTTCTTTTTAGAAATTTTACTGTC TGTTATGTGTTATGCAAGTTTTCTTTGTCATACTGTTGGTGAATTGTACACTTGGTAATT GTAAAATCATTGAGGTTAATATATATGCGGGCATATTAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)