These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7561#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3430 fasta sequence [TTAGCAATGGTTTTAATTTAATTCCACTAAAGGGGTATGAGATAATTCTGGGGGCTGACTGGATATTTACTCACAGTCCAATCACTTTGGACCTGAAACAGCGGGAGTTGGTAATCACAAAGGAGAAACAGAAGATTATACTGCAAGACTTCACTAAACCTGGCAAAAGAGCCAGGGTAGGAGAAAAGAAGATGGGTAAGTTGATCAGAAAAGGGGCTGTGGGATGTGTAATCCAGATCCATACTATTTCTGTAGAAAAGGAAAATGAGAAGCATGTTATCCCTCCTGAAATCCAAGAAATTTTACTGAAATTTCCACAGGTTCTGAAAGAACCTCAGGGCCTACCTCCAAGGAGGAAGTGTGATCACACCATTAACTTGAAGACTGGGTCAGATCCACCCAACCTCAGACCTTACAGGGTTCCCCACTACCAGAAGGAATCCATGGAAAATATCATAGCAGAGTTAATACAATCCCAAGAGATCCAGATCAGTGATAGCCCCTATTCTTCACCAGCTGTCATGGTCAGGAAGAAGGATGGGTCGTGGAGACTTTGTGTTGATTATAGACAGCTGAATGGGCAAACTATCAAGAACAAATTCCCAATGCCGATCATAGAAGATTTACTGGATGAACTACATGGGTCCAGGGTGTTCTCCAAATTGGATCTGCGTTCGGGGTATCATCAAATCCGAATGCATCCAGATGATGTGCATAAAACAGCCTTCAGGACTCACTTGGGCCACTATGAGTATAATGTGATGCCGTTTGGATTGACCAATGCACCAGCCACCTTCCAAGCTTTGATGAATCAGGTGTTAGCCCCTTATCTCAGAAAATTCGTGCTTGTGTTTTTTGATGATATTCTCATATATAGCAAAAACAAGGAGGAGCACCTAGAACATATTAAACTAGTAATGCAGGCTCTGTTAGATAACCACTTGGTGATCAAACTGAAGAAGTGTGAATTCGGTTTGGATAGAATTGCATACTTGGGGCACATTATTTCCAGTGAAGGGGTAGCTACAGACCCCGAGAAGGTAGAAGGGATTCGGAGGAGGAAAATACCTAACAACATTACTGAATTGAGAGAGTTCTTGGGGATGGCTGGTTATTACAGGAGATTCATCAAGGGATATGGTGTGATATGCAGGCCCTTACATGATATGTTAAGGAAAGATGCATTCCAATGGGGCCCAGAACAAACAACAGCATTTGAAGAACTGAAGCTGAGATTGAGTACCAGCCCAGTGCTGACAATGCCAGATTTCTCACAACCATTTGTGATCGAGGCAGATGCCTGCAACACAGGAATAGGGGCTGTGCTAATGCAGACAGGGAAACCCATTGCATACCTTAGTAAAGCATTAGGGCCCAAGGCAGCAGCACAGTCAATTTATGAAAAGGAGGCTATGGCTATTTTAGAAGCACTTAAGAAATGGAGACACTACATTCTGGGGAACAGACTAGTAATCAAGACAGACCAGCAGAGTGTAAAGTATATGATGAACCAAAGATTGGTAGAGGGCATTCAACACAAATTATTATTGAAGATGATGGAGTATGATTACTCAATTGAATATAAGGCTGGGAAGGAGAATTTAGTGGCTGATGCCCTGTCCAGGGGGAAAATTTCAGAAGCAGTCCCTGCTGAATCATGTCAAGCTATAACAGTGGTGATTCCTGAGTGGGTGACAGACATCAAAAGGAGCTATGAAGGGGATGTATTGGCACATAAAATCATTAGCTTAATTGGGACTGATATGGATCCGGAGCAATTGTATAAAGAAGAATCTGGGTTGCTCAAATACAAGGGAAGAATATATGTGGGAAGTGTCAGTGACATCAGGCAGTAGTTGTTGAGGGCATATCATGAATCAGCCTTTGGAGGCCACTCTGGAATTAGAGCCACCTATCACAGAATCAAGAAACTATTTTATTGGCCAGGAATGAAGAGGGAGGTAGAAGTATACATTAGAGAATGCCCAACATGTCAGGTGACAAAAATTGAACATGTGCACATCCCTGGGCTACTCAGTCCACTTGAAGTACCGGATATGGCTTGGTCTCACATCACTATGGACTTCATTGAGGGGCTGCCTAAATCAAAGGGAAAGGATGTCATATTGGTTGTAGTTGACAGACTCACAAAGTATGCTCATTTCATTGCTCTGTCTCACCCCTATACTGTAGAACAAGTAGTGGAGGCATTTATGGATAACATACACAAATTACATGGGATGCCACTGGTCATAGTCACTGATAGAGATAGGATATTTACTAGTAACCTGTTTCAGGAGCTGTTCAAAGCCAGAAGGGTCAACCTGAGGTTCAGCACGGCCTATCACCCACAAACAGATGGGCAAAGTGAGAGGGTGAATCAGTGCTTGGAATCCTATCTCAGGAACATGACTTTCAAGGAACCTCAGAACTGGTACTCTTGGCTAGCACTGGCTGAATGGTGGTACAATACCACATATCACACAGCAATTCAGATGACCCCATTCAAGGCACTTTATGGGTACACTCCCCCACAGATCAATGAATTCTCCGTTCCCTGCAATGTTTCTGCTGAGGCAAGAGTTTCTTTGGAAGAGAAGGAGGCTATAATTCAAAACCTCAAGAGTAGTATGGATGCTGCTCAGAAGAGAATGAAGCACTATGCGGACAGGAACAGGACTGAGAGGGAATTGCAGGTGGGAGATATGGTATATCTCAAATTGCAACCATACAGGCAGAATGCCTTGGGTGTGAGAGGATCCTTGAAGCTAAGGTCCAAGTTCTATGGACCATTTCGGGTGGAACAAAAGATTGGTCAAGTGGCATACAAACTTCAGCTACCTGAAGGAGCTAATATCCACCCTGTGTTCCATGTGAGCCAATTGAAGAAGCATCTGGGGCGCCATGCTGTTCCAATGCCTAATTTACCACTGGTAGGACCCGACGGGCAGATAAAGGCAGAACCTGTAGCAATTCTGCAACGTCGAATGATTCCAAGGAGAGGAGAACCAGTGGTACAATGGCTGGTGTTGTGGCGCAATCTATCGCCAGCTGATGCTACATGGGAGGATGCTACATTCATCAGGGCTACATTCCCAAATTTTGAACCTTGAGGACAAGTTTCAACTTAAGAAGGGGGCAATGTCAGGACCTGAAGTCTGAAATGGAAGAGCTCTGTATCTGAACTTTCTGAATTTTCTGAAGAATTGAAGATAACGTTTGGGAGAAAGGGGAAATATGAAGATCTGACGGCTGAGAAGGATACATGTTAAATCCAACGGTGGAGTCGCGTGTCCGAGTCACTGTAGTCGTCAGCGTTTGTCGTTTTGTTCTGTAACTTTCTTTACAGCTGTGTGTGTGCTGAGTTATCCAAGAGTGTAATCGATACTTAATCAGCCCGATGAGGAATGAAAGATATGACGAAAAACTC] [+] EMBL AK120165 [TTAGCAATGGTTTTAATTTAATTCCACTAAAGGGGTATGAGATAATTCTGGGGGCTGACTGGATATTTACTCACAGTCCAATCACTTTGGACCTGAAACAGCGGGAGTTGGTAATCACAAAGGAGAAACAGAAGATTATACTGCAAGACTTCACTAAACCTGGCAAAAGAGCCAGGGTAGGAGAAAAGAAGATGGGTAAGTTGATCAGAAAAGGGGCTGTGGGATGTGTAATCCAGATCCATACTATTTCTGTAGAAAAGGAAAATGAGAAGCATGTTATCCCTCCTGAAATCCAAGAAATTTTACTGAAATTTCCACAGGTTCTGAAAGAACCTCAGGGCCTACCTCCAAGGAGGAAGTGTGATCACACCATTAACTTGAAGACTGGGTCAGATCCACCCAACCTCAGACCTTACAGGGTTCCCCACTACCAGAAGGAATCCATGGAAAATATCATAGCAGAGTTAATACAATCCCAAGAGATCCAGATCAGTGATAGCCCCTATTCTTCACCAGCTGTCATGGTCAGGAAGAAGGATGGGTCGTGGAGACTTTGTGTTGATTATAGACAGCTGAATGGGCAAACTATCAAGAACAAATTCCCAATGCCGATCATAGAAGATTTACTGGATGAACTACATGGGTCCAGGGTGTTCTCCAAATTGGATCTGCGTTCGGGGTATCATCAAATCCGAATGCATCCAGATGATGTGCATAAAACAGCCTTCAGGACTCACTTGGGCCACTATGAGTATAATGTGATGCCGTTTGGATTGACCAATGCACCAGCCACCTTCCAAGCTTTGATGAATCAGGTGTTAGCCCCTTATCTCAGAAAATTCGTGCTTGTGTTTTTTGATGATATTCTCATATATAGCAAAAACAAGGAGGAGCACCTAGAACATATTAAACTAGTAATGCAGGCTCTGTTAGATAACCACTTGGTGATCAAACTGAAGAAGTGTGAATTCGGTTTGGATAGAATTGCATACTTGGGGCACATTATTTCCAGTGAAGGGGTAGCTACAGACCCCGAGAAGGTAGAAGGGATTCGGAGGAGGAAAATACCTAACAACATTACTGAATTGAGAGAGTTCTTGGGGATGGCTGGTTATTACAGGAGATTCATCAAGGGATATGGTGTGATATGCAGGCCCTTACATGATATGTTAAGGAAAGATGCATTCCAATGGGGCCCAGAACAAACAACAGCATTTGAAGAACTGAAGCTGAGATTGAGTACCAGCCCAGTGCTGACAATGCCAGATTTCTCACAACCATTTGTGATCGAGGCAGATGCCTGCAACACAGGAATAGGGGCTGTGCTAATGCAGACAGGGAAACCCATTGCATACCTTAGTAAAGCATTAGGGCCCAAGGCAGCAGCACAGTCAATTTATGAAAAGGAGGCTATGGCTATTTTAGAAGCACTTAAGAAATGGAGACACTACATTCTGGGGAACAGACTAGTAATCAAGACAGACCAGCAGAGTGTAAAGTATATGATGAACCAAAGATTGGTAGAGGGCATTCAACACAAATTATTATTGAAGATGATGGAGTATGATTACTCAATTGAATATAAGGCTGGGAAGGAGAATTTAGTGGCTGATGCCCTGTCCAGGGGGAAAATTTCAGAAGCAGTCCCTGCTGAATCATGTCAAGCTATAACAGTGGTGATTCCTGAGTGGGTGACAGACATCAAAAGGAGCTATGAAGGGGATGTATTGGCACATAAAATCATTAGCTTAATTGGGACTGATATGGATCCGGAGCAATTGTATAAAGAAGAATCTGGGTTGCTCAAATACAAGGGAAGAATATATGTGGGAAGTGTCAGTGACATCAGGCAGTAGTTGTTGAGGGCATATCATGAATCAGCCTTTGGAGGCCACTCTGGAATTAGAGCCACCTATCACAGAATCAAGAAACTATTTTATTGGCCAGGAATGAAGAGGGAGGTAGAAGTATACATTAGAGAATGCCCAACATGTCAGGTGACAAAAATTGAACATGTGCACATCCCTGGGCTACTCAGTCCACTTGAAGTACCGGATATGGCTTGGTCTCACATCACTATGGACTTCATTGAGGGGCTGCCTAAATCAAAGGGAAAGGATGTCATATTGGTTGTAGTTGACAGACTCACAAAGTATGCTCATTTCATTGCTCTGTCTCACCCCTATACTGTAGAACAAGTAGTGGAGGCATTTATGGATAACATACACAAATTACATGGGATGCCACTGGTCATAGTCACTGATAGAGATAGGATATTTACTAGTAACCTGTTTCAGGAGCTGTTCAAAGCCAGAAGGGTCAACCTGAGGTTCAGCACGGCCTATCACCCACAAACAGATGGGCAAAGTGAGAGGGTGAATCAGTGCTTGGAATCCTATCTCAGGAACATGACTTTCAAGGAACCTCAGAACTGGTACTCTTGGCTAGCACTGGCTGAATGGTGGTACAATACCACATATCACACAGCAATTCAGATGACCCCATTCAAGGCACTTTATGGGTACACTCCCCCACAGATCAATGAATTCTCCGTTCCCTGCAATGTTTCTGCTGAGGCAAGAGTTTCTTTGGAAGAGAAGGAGGCTATAATTCAAAACCTCAAGAGTAGTATGGATGCTGCTCAGAAGAGAATGAAGCACTATGCGGACAGGAACAGGACTGAGAGGGAATTGCAGGTGGGAGATATGGTATATCTCAAATTGCAACCATACAGGCAGAATGCCTTGGGTGTGAGAGGATCCTTGAAGCTAAGGTCCAAGTTCTATGGACCATTTCGGGTGGAACAAAAGATTGGTCAAGTGGCATACAAACTTCAGCTACCTGAAGGAGCTAATATCCACCCTGTGTTCCATGTGAGCCAATTGAAGAAGCATCTGGGGCGCCATGCTGTTCCAATGCCTAATTTACCACTGGTAGGACCCGACGGGCAGATAAAGGCAGAACCTGTAGCAATTCTGCAACGTCGAATGATTCCAAGGAGAGGAGAACCAGTGGTACAATGGCTGGTGTTGTGGCGCAATCTATCGCCAGCTGATGCTACATGGGAGGATGCTACATTCATCAGGGCTACATTCCCAAATTTTGAACCTTGAGGACAAGTTTCAACTTAAGAAGGGGGCAATGTCAGGACCTGAAGTCTGAAATGGAAGAGCTCTGTATCTGAACTTTCTGAATTTTCTGAAGAATTGAAGATAACGTTTGGGAGAAAGGGGAAATATGAAGATCTGACGGCTGAGAAGGATACATGTTAAATCCAACGGTGGAGTCGCGTGTCCGAGTCACTGTAGTCGTCAGCGTTTGTCGTTTTGTTCTGTAACTTTCTTTACAGCTGTGTGTGTGCTGAGTTATCCAAGAGTGTAATCGATACTTAATCAGCCCGATGAGGAATGAA ] [+] EMBL CB665939 [ GGGTTGCTCAAATACAAGGGAAGAATATATGTGGGAAGTGTCAGTGACATCAGGCAGTAGTTGTTGAGGGCATATCATGAATCAGCCTTTGGAGGCCACTCTGGAATTAGAGCCACCTATCACAGAATCAAGAAACTATTTTATTGGCCAGGAATGAAGAGGGAGGTAGAAGTATACATTAGAGAATGCCCAACATGTCAGGTGACAAAAATTGAACATGTGCACATCCCTGGGCTACTCAGTCCACTTGAAGTACCGGATATGGCTTGGTCTCACATCACTATGGACTTCATTGAGGGGCTGCCTAAATCAAAGGGAAAGGATGTCATATTGGTTGTAGTTGACAGACTCACAAAGTATGCTCATTTCATTGCTCTGTCTCACCCCTATACTGTAGAACAAGTAGTGGAGGCATTTATGGATAACATACACAAATTACATGGGATGCCACTGGTCATAGTCACTGATAGAGATAGGATATTTACTAGTAACCTGTTTCAGGAGCTGTTCAAAGCCAGAAGGGTCAACCTGAGGTTCAGCACGGCCTATCACCCACAAACAGATGGGCAAAGTGAGAGGGTGAATCAGTGCTTGGAATCCTATCTCAGGAACATGACTTTCAAGGAACCTCAGAACTGGTACTCTTGGCTAGCACTGGCTGAATGGTGGTACAATACCACATATCACACAGCAATTCAGATGACCCCATTCAAGGCACTTTATGGGTACACTCCCCCACAGATCAATGAATTCTCCGTTCCCTGCAATGTTTCTGCTGANGCAAGAGTTTCTTTGG ] [+] EMBL AK062058 [ AGTATGCTCATTTCATTGCTCTGTCTCACCCCTATACTGTAGAACAAGTAGTGGAGGCATTTATGGATAACATACACAAATTACATGGGATGCCACTGGTCATAGTCACTGATAGAGATAGGATATTTACTAGTAACCTGTTTCAGGAGCTGTTCAAAGCCAGAAGGGTCAACCTGAGGTTCAGCACGGCCTATCACCCACAAACAGATGGGCAAAGTGAGAGGGTGAATCAGTGCTTGGAATCCTATCTCAGGAACATGACTTTCAAGGAACCTCAGAACTGGTACTCTTGGCTAGCACTGGCTGAATGGTGGTACAATACCACATATCACACAGCAATTCAGATGACCCCATTCAAGGCACTTTATGGGTACACTCCCCCACAGATCAATGAATTCTCCGTTCCCTGCAATGTTTCTGCTGAGGCAAGAGTTTCTTTGGAAGAGAAGGAGGCTATAATTCAAAACCTCAAGAGTAGTATGGATGCTGCTCAGAAGAGAATGAAGCACTATGCGGACAGGAACAGGACTGAGAGGGAATTGCAGGTGGGAGATATGGTATATCTCAAATTGCAACCATACAGGCAGAATGCCTTGGGTGTGAGAGGATCCTTGAAGCTAAGGTCCAAGTTCTATGGACCATTTCGGGTGGAACAAAAGATTGGTCAAGTGGCATACAAACTTCAGCTACCTGAAGGAGCTAATATCCACCCTGTGTTCCATGTGAGCCAATTGAAGAAGCATCTGGGGCGCCATGCTGTTCCAATGCCTAATTTACCACTGGTAGGACCCGACGGGCAGATAAAGGCAGAACCTGTAGCAATTCTGCAACGTCGAATGATTCCAAGGAGAGGAGAACCAGTGGTACAATGGCTGGTGTTGTGGCGCAATCTATCGCCAGCTGATGCTACATGGGAGGATGCTACATTCATCAGGGCTACATTCCCAAATTTTGAACCTTGAGGACAAGTTTCAACTTAAGAAGGGGGCAATGTCAGGACCTGAAGTCTGAAATGGAAGAGCTCTGTATCTGAACTTTCTGAATTTTCTGAAGAATTGAAGATAACGTTTGGGAGAAAGGGGAAATATGAAGATCTGACGGCTGAGAAGGATACATGTTAAATCCAACGGTGGAGTCGCGTGTCCGAGTCACTGTAGTCGTCAGCGTTTGTCGTTTTGTTCTGTAACTTTCTTTACAGCTGTGTGTGTGCTGAGTTATCCAAGAGTGTAATCGATACTTAATCAGCCCGATGAGGAATGAAAGATATGA ] [-] EMBL CB665940 [ GATGCTGCTCAGAAGAGAATGAAGCACTATGCGGACAGGAACAGGACTGAGAGGGAATTGCAGGTGGGAGATATGGTATATCTCAAATTGCAACCATACAGGCAGAATGCCTTGGGTGTGAGAGGATCCTTGAAGCTAAGGTCCAAGTTCTATGGACCATTTCGGGTGGAACAAAAGATTGGTCAAGTGGCATACAAACTTCAGCTACCTGAAGGAGCTAATATCCACCCTGTGTTCCATGTGAGCCAATTGAAGAAGCATCTGGGGCGCCATGCTGTTCCAATGCCTAATTTACCACTGGTAGGACCCGACGGGCAGATAAAGGCAGAACCTGTAGCAATTCTGCAACGTCGAATGATTCCAAGGAGAGGAGAACCAGTGGTACAATGGCTGGTGTTGTGGCGCAATCTATCGCCAGCTGATGCTACATGGGAGGATGCTACATTCATCAGGGCTACATTCCCAAATTTTGAACCTTGAGGACAAGTTTCAACTTAAGAAGGGGGCAATGTCAGGACCTGAAGTCTGAAATGGAAGAGCTCTGTATCTGAACTTTCTGAATTTTCTGAAGAATTGAAGATAACGTTTGGGAGAAAGGGGAAATATGAAGATCTGACGGCTGAGAAGGATACATGTTAAATCCAACGGTGGAGTCGCGTGTCCGAGTCACTGTAGTCGTCAGCGTTTGTCGTTTTGTTCTGTAACTTTCTTTACAGCTGTGTGTGTGCTGAGTTATCCAAGAGTGTAATCGATACTTAATCAGCCCGATGAGGAATGAAAGATATGACGAAAAACTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||