These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7603#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1006 fasta sequence [GAAGGAGTAGAAAATCATCCCTCGTTGTCGTTTTAAACAACTTGATCAGGTGATCAATCAAATCAATAGAAACGATGGCTGCAGGCTTGCAAGTGTTTGGCCAGCCAGCATCTACTGATGTTGCCAGGGTCCTGACATGCCTCTTTGAGAAGGATCTGGAATTTGAACTTGTCTGCATTGATACATTCAAGAGAGAGCACAAGCTTCCTGAGTTCATTAAGCTGCGGGATCCTAATGGGCAAGTGACATTTAAACATGGTGACAAAACCATCGTCGATTCAAGGGCTATATGCCGGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAAC-GGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA-TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT-GTCATCGTCGCTAGT-TTGCC-TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT-TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTCTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACCTGGCAGNTCTAAATCTGGTGGTTTCTTCGCCT] [+] EMBL CF312867 [GAAGGAGTAGAAAATCATCCCTCGTTGTCGTTTTAAACAACTTGATCAGGTGATCAATCAAATCAATAGAAACGATGGCTGCAGGCTTGCAAGTGTTTGGCCAGCCAGCATCTACTGATGTTGCCAGGGTCCTGACATGCCTCTTTGAGAAGGATCTGGAATTTGAACTTGTCTGCATTGATACATTCAAGAGAGAGCACAAGCTTCCTGAGTTCATTAAGCTGCGGGATCCTAATGGGCAAGTGACATTTAAACATGGTGACAAAACCATCGTCGATTCAAGGGCTATATGCCGGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAACNGGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCT ] [+] EMBL CA766885 [ GGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAAC GGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGCGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGNTGTGACGTAGT TTCATACCATGTACCTCGNTGCTTTACAGGTCATTTGGTTTCTCCCTTGGTTAGTGATTAAATAAAATTGGTAATCGACCTGGCAGNTCTAAATCTGGTGGTTTCTTCGCCT] [+] EMBL AK059226 [ TCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTTCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTCTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACC ] [-] EMBL BU673812 [ AAATGAGATGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTTTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACCTGGCAG ] [-] EMBL BU673645 [ gtAGAGAGGTAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCCAATTTCAAAGCGCGAGACATGGAACCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGGGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCAGTCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTTGGTCATCGTCGCTAGTGTTGCCGTGTCCCCTGCTTATATTGTCGGGTGACCCAATAATATGAAGCCTCTTCTTGTTGTGACGTAGTGTTCATACCATGTACCTCGGTGCTTTACAGGTCATTGGTTTTCTCCCTTGTTTAGGGATTAAATAAAATTGTTAATCGACCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||