These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7609#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1103 fasta sequence [GGCCGCTCCTCCGCTTGCTCTCCCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT-CTAGGTTTCCATGTGG-AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT-ATGGGGGTGCTTGGTAGA-ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTAGAATTTCGCTATGTGAAATCAACGCAAACACTGTGAAAACTTGTTGGTTGATGCAACTTCTGATCTTCCCTAGATTCCCAAGTCATAGTGTACATGGCATGCCTTGGAAGCTCATGGCATGTTCCATTTTGTCATTAGATTAGAACAATGAAAGGAAGTTAGGAACATGCCATTTTGCATATAGATGTGTCAGTCAAGACAGCAGAGCAAGGAAAGTATATATTGGGCTATTGGCACTTCATCTGGTAAGGCATAAAGCTTTTGCCTTTGCCGCGAAGCTGCCTTATTGTCTTTTCCACTTTCCAAAAAAAAAAAAAAAAAA] [+] EMBL AK066349 [GGCCGCTCCTCCGCTTGCTCTCCCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT ATGGGGGTGCTTGGTAGA ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTA ] [+] EMBL CB682078 [ TGCTCTCTCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTTTCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT ATGGGGGTGCTTGGTAGA ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACAC ] [+] EMBL OSC29171 [ TCTCCCTTGCTTCCGAGGGCTCCG CGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAG GGAGCAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTNGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTNAGGTGTACGCCCAGGC ] [+] EMBL AU069132 [ GGGTTGCGGGGGCGATNGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCA NGGNACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCAT ] [+] EMBL AU069131 [ GGTCCTAGGTTNCCATGTGGAAATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGTNATGGGGGTGCTTGGTAGACATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTAGAATTTCGCTATGTGAAATCAACGCAAACACTGTGAAAACTTGTTGGTTGATGCAACTTCTGATCTTCCCTAGATTCCCAAGTCATAGTGTACATGGCATGCCTTGGAAGCTCATGGCATGTTCCATTTTGTCATTAGATTAGAACAATGAAAGGAAGTTAGGAACATGCCATTTTGCATATAGATGTGTCAGTCAAGACAGCAGAGCAAGGAAAGTATATATTGGGCTATTGGCACTTCATCTGGTAAGGCATAAAGCTTTTGCCTTTGCCGCGAAGCTGCCTTATTGTCTTTTCCACTTTCCAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||