These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1370 fasta sequence [TCTCTTCCCCTCTTTTCGTTCCAATCCACAGGAGGAGAGGCGAGGAGAGGAGAGCGAAGGAGCAGAGGCGAAGCACGAGTCCAATCCAAACCCGAAAAATTCGCGTGGCGGCCAAGCCATCGACGCGAGCGAAACGCACGAGCGCGTCGCCTCCGCCTCCGCCGCGCCTCGCCATGGCGGCGGCCGTCTCCACGGCGCCGCGCGCGCCGCTCCCCGCCGGCGCCGTGTCGTCCTCCTGCTGCTCGTCGTCGTCCTCCTCCGCGTCGATGTCGCGGAGGTGGGATCCGAGCCCGAACCCTAGCAGCGGCAGCGGCAGCAGGTTGTTCCTCGCGGCGCGGCGCGGGGAGCGGCTGCGCGTGCGCCGGCTTGCGGGCGCCGCGCCCGCACCGGCACCACGCCGCCGCGTTTCGTCCGTGGTGCGGTGCGGCGGCGGTGGAGGCGGCGTGCGGAGCCCCGACGACGCGGACGCCGGCAGCGGCGAGCGGCGGAGGGGCTGGGACGCGCTGTTCCACGACGCGTTCCAGGGCGCCGTGCGGCG-GTGGAGCGAGTACGTCGGCAGCCACTGGCCCTTGGCGCCTGCCGGGAAGGATGCTGGGCTCGGGAAGAGGGTTGAGAGTCGTCGCGAAGAGCAGGTTAGGGGCGAGGTGGAGGAGGAAGAGGGGAAGTGGAGCTGGGAGAGGTGGAAGCAGCACTTCGCGCTAATCGAAGAGAGCGAGCGCCTCGTCGATGAGCTGCAGCTACAACTACGGACTGCTGTTTATAGAGAGGACTTCAGGAGTGCTCACAAACTGAAGTTGGCTATTGCGGCTACATCAAAAAACGATACTGTGGGCAGAGCAATTTCTGACTTAAATAGTGCAATAGAAGAAGAGCGCTACATGGATGCAACTTATATTAGAGATCATGCTGGCGCAGGACTGTTGGGATGGTGGTCTGGGATTTCTGGAAATTTGTCTGATCCATATGGTCTTATAATTCGTATAAGTGCTGAACATGGTCGATATGTGGCGAAAAGTTACGATACCAGGCAGCTGAATTCAGATGGCCCTGGTTTCCCCATATTTGAAATTTACTTTGCTGAGGCCAATGGAGGGTACAATCTGCAGGCAGTGCATCTGAAACCAGATGACAGTGATTCTCAGCAGTTGTCACATACGTTGAGAGAGAAACTATGCATGGATAGTATAAACATATCTAGCAGTTCATTTGGGAGCTAAACATGAGGATCACAATGAAGGTGTAAACATGGGATGATCAAAATAGTGATGATAGTGATATTTCTGCTGGTCCAGCTTGGTTTCAAAAACTTGCCAAGCGATTCAACTCCAGTTCCCAGGGTTAAAATACTTAAAGTGGTNCCNTGGGAAATG] [+] EMBL CB677976 [TCTCTTCCCCTCTTTTCGTTCCAATCCACAGGAGGAGAGGCGAGGAGAGGAGAGCGAAGGAGCAGAGGCGAAGCACGAGTCCAATCCAAACCCGAAAAATTCGCGTGGCGGCCAAGCCATCGACGCGAGCGAAACGCACGAGCGCGTCGCCTCCGCCTCCGCCGCGCCTCGCCATGGCGGCGGCCGTCTCCACGGCGCCGCGCGCGCCGCTCCCCGCCGGCGCCGTGTCGTCCTCCTGCTGCTCGTCGTCGTCCTCCTCCGCGTCGATGTCGCGGAGGTGGGATCCGAGCCCGAACCCTAGCAGCGGCAGCGGCAGCAGGTTGTTCCTCGCGGCGCGGCGCGGGGAGCGGCTGCGCGTGCGCCGGCTTGCGGGCGCCGCGCCCGCACCGGCACCACGCCGCCGCGTTTCGTCCGTGGTGCGGTGCGGCGGCGGTGGAGGCGGCGTGCGGAGCCCCGACGACGCGGACGCCGGCAGCGGCGAGCGGCGGAGGGGCTGGGACGCGCTGTTCCACGACGCGTTCCAGGGCGCCGTGCGGCG GTGGAGCGAGTACGTCGGCAGCCACTGGCCCTTGGCGCCTGCCGGGAAGGATGCTGGGCTCGGGAAGAGGGTTGAGAGTCGTCGCGAAGAGCAGGTTAGGGGCGAGGTGGAGGAGGAAGAGGGGAAGTGGAGCTGGGAGAGGTGGAAGCAGCACTTCGCGCTAATCGAAGAGAGCGAGCGCCTCGTCGATGAGCTGCAGCTACAACTACGGACTGCTGTTTATAGAGAGGACTTCAGGAGTGCTCACAAACTGAAGTTGGCTATTGCGGCTACATCA ] [+] EMBL CB650784 [ TCTTTTCCTTCCAATCCACAGGAGGAGAGGCGAGGAGAGGAGAGCGAAGGAGCAGAGGCGAAGCACGAGTCCAATCCAAACCCGAAAAATTCGCGTGGCGGCCAAGCCATCGACGCGAGCGAAACGCACGAGCGCGTCGCCTCCGCCTCCGCCGCGCCTCGCCATGGCGGCGGCCGTCTCCACGGCGCCGCGCGCGCCGCTCCCCGCCGGCGCCGTGTCGTCCTCCTGCTGCTCGTCGTCGTCCTCCTCCGCGTCGATGTCGCGGAGGTGGGATCCGAGCCCGAACCCTAGCAGCGGCAGCGGCAGCAGGTTGTTCCTCGCGGCGCGGCGCGGGGAGCGGCTGCGCGTGCGCCGGCTTGCGGGCGCCGCGCCCGCACCGGCACCACGCCGCCGCGTTTCGTCCGTGGTGCGGTGCGGCGGCGGTGGAGGCGGCGTGCGGAGCCCCGACGACGCGGACGCCGGCAGCGGCGAGCGGCGGAGGGGCTGGGACGCGCTGTTCCACGACGCGTTCCAGGGCGCCGTGCGGCG GTGGAGCGAGTACGTCGGCAGCCACTGGCCCTTGGCGCCTGCCGGGAAGGATGCTGGGCTCGGGAAGAGGGTTGAGAGTCGTCGCGAAGAGCATGTTAGGGGCGAGGTGGAGGAGGAAGAGGGGAAGTGGAGCTGGGAGAGGTGGAAGCAGCACTTCGCGCTAATCGAAGAGAGCGAGCGCCTCGTCGA ] [+] EMBL CB655795 [ AGCACGAGTCCAATCCAAACCCGAAAAATTCGCGTGGCGGCCAAGCCATCGACGCGAGCGAAACGCACGAGCGCGTCGCCTCCGCCTCCGCCGCGCCTCGCCATGGCGGCGGCCGTCTCCACGGCGCCGCGCGCGCCGCTCCCCGCCGGCGCCGTGTCGTCCTCCTGCTGCTCGTCGTCGTCCTCCTCCGCGTCGATGTCGCGGAGGTGGGATCCGAGCCCGAACCCTAGCAGCGGCAGCGGCAGCAGGTTGTTCCTCGCGGCGCGGCGCGGGGAGCGGCTGCGCGTGCGCCGGCTTGCGGGCGCCGCGCCCGCACCGGCACCACGCCGCCGCGTTTCGTCCGTGGTGCGGTGCGGCGGCGGTGGAGGCGGCGTGCGGAGCCCCGACGACGCGGACGCCGGCAGCGGCGAGCGGCGGAGGGGCTGGGACGCGCTGTTCCACGACGCGTTCCAGGGCGCCGTGCGGCG GTGGAGCGAGTACGTCGGCAGCCACTGGCCCTTGGCGCCTGCCGGGAAGGATGCTGGGCTCGGGAAGAGGGTTGAGAGTCGTCGCGAAGAGCAGGTTAGGGGCGAGGTGGAGGAGGAAGAGGGGAAGTGGAGCTGGGAGAGGTGGAAGCAGCACTTCGCGCTAATCGAAGAGAGCGAGCGCCTCGTCGATGAGCTGCAGCTACAACTACGGACTGCTGTTTATAGAGAGGACTTCAGGAGTGCTCACAAACTGAAGTTGGCTATTGCGGCTACATCAAAAAACGATACTGTGGGCAGAGCAATTTCTGACTTAAATAGTGCAATAGAAGAAGAGCGCTACATGGATGCAACTTATATTAGAGAT ] [+] EMBL CB633486 [ GCCCACACTACACGGACGCCGGCAGCGGCGAGCGGCGGAGGGGCTGGGACGCGCTGTTCCACGACGCGTTCCAGGGCGCCGTGCGGCGAGTGGAGCGAGTACGTCGGCAGCCACTGGCCCTTGGCGCCTGCCGGGAAGGATGCTGGGCTCGGGAAGAGGGTTGAGAGTCGTCTCGAAGAGCAGGTTATGGGCGAGGTGGAGGAGGAAGAGGGGAAGTGGAGCTGGGAGAGGTGGAAGCAGCACTTCGCGCTAATCGAAGAGAGCGAGCGCCTCGTCGATGAGCTGCAGCTACAACTACGGACTGCTGTTTATAGAGAGGACTTCAGGAGTGCTCACAAACTGAAGTTGGCTATTGCGGCTACATCAAAAAACGATACTGTGGGCAGAGCAATTTCTGACTTAAATAGTGCAATAGAAGAGGAGCGCTACATGGATGCAACTTATATTAGAGATCATGCTGGCGCAGGACTGTTGGGATGGTGGTCTGGGATTTCTGGAAATTTGTCTGATCCATATGGTCTTATAATTCGTATAAGTGCTGAACATGGTCGATATGTGGCGAAAAGTTACGATACCAGGCAGCTGAATTCAGATGGCCCTGGTTTCCCCATATTTGAAATTTACTTTGCTGAGGCCAATGGAGGGTACAATCTGCAGGCAGTGCATCTGAAACCAGATGACAGTGATTCTCAGCAGTTGTCACATACGTTGAGAGAGAAACTATGCATGGATAGTATAAACATATCTAGCAGTTCATTTG ] [+] EMBL C26223 [ GTCTGGGATTTCTGGAAATTTGTCTGATCCATATGGTCTTATAATTCGTATAAGTGCTGAACATGGTCGATATGTGGCGAAAAGTTACGATACCAGGCAGCTGAATTCAGATGGCCCTGGTTTCCCCATATTTGAAATTTACTTTGCTGAGGCCAATGGAGGGTACAATCTGCAGGCAGTGCATCTGAAACCAGATGACAGTGATTCTCAGCAGTTGTCAAATACGTTGAGAGAGAAACTAGGCATGGATAGTATAAACATATCTAGCAGTTCATTTGGGAGCTAAACATGAGGATCACAATGAAGGTGTAAACATGGGATGATCAAAATAGTGATGATAGTGATATTTCTGCTGGTCCAGCTTGGTTTCAAAAACTTGCCAAGCGATTCAACTCCAGTTCCCAGGGTTAAAATACTTAAAGTGGTNCCNTGGGAAATG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||