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Oryza sativa
cluster # 7631 cluster # 7631       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7631#0 length = 1007 sequences # 5  

consensusID : consensus_7631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1007
fasta sequence
                              [GTCTCCAGCTCTCCTCCGCACCGCAGTCCGCAAACCCCAGTTTCTCAAGCATCGAAGAATGGAAAGAGGAGATGGCGCTATACCCTTCCGCGCCACCAACATCGCCGCCGCCGCCGGCACGCCCACCTCTGCTTCTACTGCGGGCCGCCCCCAGCAAGGGGATAGGGAAAATGCTGTCAGTGCTGAGATTGAGAGGGTTAACAAACTGCCAGCCAATAGTTCCTATGCCATACACCGCTTGAAGGTTCTAAACAAGCTTCGCCATCTATTATCTATCAAGAGAACAACATCTCAAGATGAGGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATCCTCCATATGTTACATATGGTAGCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAACATGTTTCCAGTACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTTTATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTCCGTACGCAAATGTCACTCTTAACCATAACGGAACTTCTATAGTTCTATTGTAGATGCCCAAAACTTTAAAAATTGTATGACATTATTAGGTGTTG-CTATGTTGGCAATGGAGCAAACAATCTGGATTTATGCTACACTTTGGAAGTGTAGCATAAATTCAAAATTTTCCCCTNCNAATCAATANTATCTATAAAAAATTTNCCTGTCCCTTCCTTTTTTTACTAATAATAACTANNNNACCCTTGGGGGGGGGCCGGGGCCCAAATTCCCCCTATAGGGGTGGTATTGCGCCCCCTACTGGCCGGGGTTTACAACCGTGAGACGGGGAAAACTCGGGGTCCCCAACTATAATGTTTGGCGGCAAATCCCTCTTTGCCCAGGTGGGGGATAATAAAAAAAGCCCCCCCGAATGGCCCTTCCCAACATTGGGCCAACCTCTGAGTGGAAAGGGCACCCCCCTTGTGGGCGCTATAATAGCC]

[+] EMBL CF279149             [GTCTCCAGCTCTCCTCCGCACCGCAGTCCGCAAACCCCAGTTTCTCAAGCATCGAAGAATGGAAAGAGGAGATGGCGCTATACCCTTCCGCGCCACCAACATCGCCGCCGCCGCCGGCACGCCCACCTCTGCTTCTACTGCGGGCCGCCCCCAGCAAGGGGATAGGGAAAATGCTGTCAGTGCTGAGATTGAGAGGGTTAACAAACTGCCAGCCAATAGTTCCTATGCCATACACCGCTTGAAGGTTCTAAACAAGCTTCGCCATCTATTATCTATCAAGAGAACAACATCTCAAGATGAGGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATCCTCCATATGTTACATATGGTAGCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAACATGTTTCCAGTACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTTTATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTCCGTACGCAAATGTCACTCTTAACCATAACGGAACTTCTATAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BE040164             [            CCTCCGCACCGCAGTCCGCAAACCCCAGTTTCTCAAGCATCGAAGAATGGAAAGAGGAGATGGCGCTATACCCTTCCGCGCCACCAACATCGCCGCCGCCGCCGGCACGCCCACCTCTGCTTCTACTGCGGGCCGCCCCCAGCAAGGGGATAGGGAAAATGCTGTCAGTGCTGAGATTGAGAGGGTTAACAAACTGCCAGCCAATAGTTCCTATGCCATACACCGCTTGAAGGTTCTAAACAAGCTTCGCCATCTATTATCTATCAAGAGAACAACATCTCAAGATGAGGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATCCTCCATATGTTACATATGGTAGCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAACATGTTTCCAGTACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTTTATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTTCGTACGCAAATGGCACTCTTAACCATAACGGAACTTCTATAGGTCTATTGTAGATGCCCAAAACTTTAAAAATTGTATGACATTATTAGGTGGTG CTATGTTGGCAATGGAGCAAACAATCTGGATTTATGCTACACTTTGGAAGTGTAGCATAAATTCAAAATTTTCCCCTNCNAATCAATANTATCTATAAAAAATTTNCCTGTCCCTTCCTTTTTTTACTAATAATAACTANNNNACCCTTGGGGGGGGGCCGGGGCCCAAATTCCCCCTATAGGGGTGGTATTGCGCCCCCTACTGGCCGGGGTTTACAACCGTGAGACGGGGAAAACTCGGGGTCCCCAACTATAATGTTTGGCGGCAAATCCCTCTTTGCCCAGGTGGGGGATAATAAAAAAAGCCCCCCCGAATGGCCCTTCCCAACATTGGGCCAACCTCTGAGTGGAAAGGGCACCCCCCTTGTGGGCGCTATAATAGCC]
[+] EMBL CB683567             [                                                                AGACCATATGGCGCTATACCCTTCCGCGCCACCAACATCGCCGCCGCCGCCGGCACGCCCACCTCTGCTTCTACTGCGGGCCGCCCCCAGCAAGGGGATAGGGAAAATGCTGTCAGAGCTGACATTGAGAGGGTTAACAAACTGCCAGCCAATAGTTCCTATGCCATACACCGCTTGAAGGTTCTAAACAAGCTTCGCCATCTATTATCTATCAAGAGAACGACATCTCAAGATGAGGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATCCTCCATATGTTACATATGGTAGCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAACATGTTTCCAGAACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTTTATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTCCGTACGCAAATGTCACTCTTAACCATAACGGAACTTCTATAGTTCTATTGTAGATGCCCAAAACTTGAAAAATTGTATGACATTATTAGGTGTTG CTATGTTGGCAATGGAGCAAACATTCTGAATTTATGCTACAC TTGGAAGTGTAGCATAAATTCAA                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU160990             [                                                                                                                                                                                                                                                                  TCGCCATCTATTATCTATCAAGAGAACAACATCTCAAGATGAGGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATCCTCCATATGTTACATAT    GCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAACATGTTTCCAGTACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTTTATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTCCGTACGCAAATGTCACTCTTAACCATAACGGAACTTCTATAGTTCTATTGTAGATGCCCAAAACTTTAAAAATTGTATGACATTATTAGGTGTTG CTAaa                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF279150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGATGTATGGAGTATATGATCTTCCGTACGCAAAAGTCACTCTTAACCATAACGGAACTTCTATAGTTCTATTGTAGATGCCCAAAACTTTAAAAATTGTATGACATTATTAGGTAATGTCTAaaaaa                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_7631#0 GTCTCCAGCTCTCCTCCGCACCGCAGTCCGCAAACCCCAGTTTCTCAAGCATCGAAGAAT GGAAAGAGGAGATGGCGCTATACCCTTCCGCGCCACCAACATCGCCGCCGCCGCCGGCAC GCCCACCTCTGCTTCTACTGCGGGCCGCCCCCAGCAAGGGGATAGGGAAAATGCTGTCAG TGCTGAGATTGAGAGGGTTAACAAACTGCCAGCCAATAGTTCCTATGCCATACACCGCTT GAAGGTTCTAAACAAGCTTCGCCATCTATTATCTATCAAGAGAACAACATCTCAAGATGA GGAGCTTGAACTTCTTTTTGCAAGCCTTTCAATTTAAACACTATCGGACTATCCTGTATC CTCCATATGTTACATATGGTAGCTGGGTGCTCCGTTTTGGCATTTCTGCTGTCCGTCGAA CATGTTTCCAGTACGGTTTTCTGAAGTTATTGGAAATCACCCTTCTATTTTGTAGAACTT TATGAGTGGATGGTGTTGAAACTATGATGTATGGAGTATATGATCTTCCGTACGCAAATG TCACTCTTAACCATAACGGAACTTCTATAGTTCTATTGTAGATGCCCAAAACTTTAAAAA TTGTATGACATTATTAGGTGTTGCTATGTTGGCAATGGAGCAAACAATCTGGATTTATGC TACACTTTGGAAGTGTAGCATAAATTCAAAATTTTCCCCTNCNAATCAATANTATCTATA AAAAATTTNCCTGTCCCTTCCTTTTTTTACTAATAATAACTANNNNACCCTTGGGGGGGG GCCGGGGCCCAAATTCCCCCTATAGGGGTGGTATTGCGCCCCCTACTGGCCGGGGTTTAC AACCGTGAGACGGGGAAAACTCGGGGTCCCCAACTATAATGTTTGGCGGCAAATCCCTCT TTGCCCAGGTGGGGGATAATAAAAAAAGCCCCCCCGAATGGCCCTTCCCAACATTGGGCC AACCTCTGAGTGGAAAGGGCACCCCCCTTGTGGGCGCTATAATAGCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)