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Oryza sativa
cluster # 7663 cluster # 7663       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7663#0 length = 930 sequences # 5  

consensusID : consensus_7663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 930
fasta sequence
                              [CCTTCGTTGGGCGTGGGCGTCGCGAGAGGCGAGATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGACGGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTGCCTCGAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTGGTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATGGACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGGTTCAACTTTTGCAAGAAGAAGCTCATCTGGTTCAACGGCAGAAAGATCTAGAGTATGAGGCTGAGTTTGAGCAGAGCGCGTCCAAAAGCAAGGATGGT]

[+] EMBL C28165               [CCTTCGTTGGGCGTGGGCGTCGCGAGAGGCGAGATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGNTGGTGACGGAGGTGCTGGGGAGCAACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCNACTTCGGCGCCCCCGACGGCCACGGCATCTTCNACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTTCCTCGAGGTCTNCAATAAGATTTNTGAAAAATTTGGAAAGCATGGCCTNGTAAAACCTAAACAAACTATNCGAAGCTTTGTCAatn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB628441             [   cCGTTGGGCGTGGGCGTCGCGAGAGGCGAGATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGACGGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTGCCTCGAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTGGTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATGGACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCATATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACA                                                                                                                                          ]
[+] EMBL CB632503             [       TGGCCTTGGGCGTCGCGAGAGGCGAGATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGACGGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTGCCTCGAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTGGTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATGGACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGC                                                                                                                                                                                                                      ]
[+] EMBL CB660366             [                                                                                                                                                                                                                                                                                                                                                                     ATGGANGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTCCCTCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGGTTCAACTTTTGCAAGAAGAAGCTCATCTGGTTCAACGGCAGAAAGATCTAGAGTATGAGGCTGAGTTTGAGCAGAGCGCGTCCAAAAGCAAGGATGGT]
[+] EMBL CB649373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATACCCAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGGTTCAACTTTTGCAAGAAGAAGCTCATCTGGTTCAACGGCAGAAAGATCTAGAGTATGAGGCTGAGTTTGAGCAGAGCGCGTCCAAAAGCAAGGATGGT]


>consensus_7663#0 CCTTCGTTGGGCGTGGGCGTCGCGAGAGGCGAGATGGCGGCGGCGACGTTGGCGGCGGCG AGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCC ATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGAC GGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGAC GAGGAGCACTGCCTCGAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTG GTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATG GACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCA CGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAA TACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTA AATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTT ACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCAC TATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATG CATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTG GGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGGTTCAACTT TTGCAAGAAGAAGCTCATCTGGTTCAACGGCAGAAAGATCTAGAGTATGAGGCTGAGTTT GAGCAGAGCGCGTCCAAAAGCAAGGATGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)