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Oryza sativa
cluster # 7677 cluster # 7677       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7677#0 length = 857 sequences # 5  

consensusID : consensus_7677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 857
fasta sequence
                              [AAAAAAAAATCCTCTTCTCATCTCCTCCCTCCGAGTCATTTCCCGCACCGCCGCCTCCACTTCACCCGCCTCGCCGCCGCCATCGCCGACGTCGCCGCCGCCGTCGCTGCGGCGAGCTTCCCGTCCGGCAGGCCGATGGACACCGTGGGCGCCCGCCTGAGCCGCTCGTCGACGCGGTACGGCCCCGTCGGGAACACCGCCTCCTCCTTCAGCGGGCCCGTCAGGAAGTGGCGCAAGGCCTGGGTCCCCATCGCCGCCGGCGGGGCGGGGTACGCCGGGATGATGGGCCCCATGGGTGTCTCCAGGGGGAACAAGGTGGTGCTGTTCAGGTGGGCGCCGGTGAACGGCGGCGCGGCCGGGGGTGGCGGTGGCAGCGGCGACGGCGACGAGTCGGCAGCGGTGGCGGCCACCAGGCGGCGCTTCGTTCCGGCTTCAGGCGTGGCACAAAATTCTACCAAGAAGAGCGGCAGCACCGAGCTGAATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATCTGAGCGCAGAAGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCG-CCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATCTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTTGTCAGATTGGAAAAAAAA]

[+] EMBL AK059004             [AAAAAAAAATCCTCTTCTCATCTCCTCCCTCCGAGTCATTTCCCGCACCGCCGCCTCCACTTCACCCGCCTCGCCGCCGCCATCGCCGACGTCGCCGCCGCCGTCGCTGCGGCGAGCTTCCCGTCCGGCAGGCCGATGGACACCGTGGGCGCCCGCCTGAGCCGCTCGTCGACGCGGTACGGCCCCGTCGGGAACACCGCCTCCTCCTTCAGCGGGCCCGTCAGGAAGTGGCGCAAGGCCTGGGTCCCCATCGCCGCCGGCGGGGCGGGGTACGCCGGGATGATGGGCCCCATGGGTGTCTCCAGGGGGAACAAGGTGGTGCTGTTCAGGTGGGCGCCGGTGAACGGCGGCGCGGCCGGGGGTGGCGGTGGCAGCGGCGACGGCGACGAGTCGGCAGCGGTGGCGGCCACCAGGCGGCGCTTCGTTCCGGCTTCAGGCGTGGCACAAAATTCTACCAAGAAGAGCGGCAGCACCGAGCTGAATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATCTGAGCGCAGAAGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCG CCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATCTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTT                  ]
[+] EMBL AK098995             [                                      TTTCCCGCACCGCCGCCTCCACTTCACCCGCCTCGCCGCCGCCATCGCCGACGTCGCCGCCGCCGTCGCTGCGGCGAGCTTCCCGTCCGGCAGGCCGATGGACACCGTGGGCGCCCGCCTGAGCCGCTCGTCGACGCGGTACGGCCCCGTCGGGAACACCGCCTCCTCCTTCAGCGGGCCCGTCAGGAAGTGGCGCAAGGCCTGGGTCCCCATCGCCGCCGGCGGGGCGGGGTACGCCGGGATGATGGGCCCCATGGGTGTCTCCAGGGGGAACAAGGTGGTGCTGTTCAGGTGGGCGCCGGTGAACGGCGGCGCGGCCGGGGGTGGCGGTGGCAGCGGCGACGGCGACGAGTCGGCAGCGGTGGCGGCCACCAGGCGGCGCTTCGTTCCGGCTTCAGGCGTGGCACAAAATTCTACCAAGAAGAGCGGCAGCACCGAGCTGAATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATCTGAGCGCAGAAGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCG CCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATCTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTT                  ]
[+] EMBL CF327619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTACCAAGAAGAGCGGCAGCACCGAGCTGAATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATCTGAGCGCAGAAGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCG CCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATCTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTTGTCAGATTGGAAAAAAA ]
[-] EMBL CF327618             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TACCAAGAAGAGCGGCAGCACCGAGCTGAATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATTTGAGCGCAGAAGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCGCCCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATTTTATTAGCATCTATCTCCTAGCTTTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTTTTATTAGCATTTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTTGTCAGATTGGAAAAAAAA]
[+] EMBL AU108716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTTTAACCG CCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAATCTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGTAGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCCCTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTTGTCAGATTGGANAAAAA ]


>consensus_7677#0 AAAAAAAAATCCTCTTCTCATCTCCTCCCTCCGAGTCATTTCCCGCACCGCCGCCTCCAC TTCACCCGCCTCGCCGCCGCCATCGCCGACGTCGCCGCCGCCGTCGCTGCGGCGAGCTTC CCGTCCGGCAGGCCGATGGACACCGTGGGCGCCCGCCTGAGCCGCTCGTCGACGCGGTAC GGCCCCGTCGGGAACACCGCCTCCTCCTTCAGCGGGCCCGTCAGGAAGTGGCGCAAGGCC TGGGTCCCCATCGCCGCCGGCGGGGCGGGGTACGCCGGGATGATGGGCCCCATGGGTGTC TCCAGGGGGAACAAGGTGGTGCTGTTCAGGTGGGCGCCGGTGAACGGCGGCGCGGCCGGG GGTGGCGGTGGCAGCGGCGACGGCGACGAGTCGGCAGCGGTGGCGGCCACCAGGCGGCGC TTCGTTCCGGCTTCAGGCGTGGCACAAAATTCTACCAAGAAGAGCGGCAGCACCGAGCTG AATTTGAACCTTGGGTTGGAAGATCCAGATGACGACAGCGATGCTGATCTGAGCGCAGAA GAGCAACGTGACAGTGGAAGTAACCAACGCTCAGACAACAGACTGAAGAGAAAAGCCTTT TAACCGCCCAGTCCTTTGATGATGAGAACGTACGTGGTCATGCGAGGCCACTCATGTAAT CTTATTAGCATCTATCTCCTAGCTCTTAGCTTGTGTTAGGCATTAGCAATTGTGTATTGT AGTCCAGAACAATGCATTAGCCAGTTGTAGTCTTATTAGCATCTTATGCCAATATGCCCC CTTCCATGAGCTGATGATGTAGCAACATGTTATTACACCAAGTGTTAATGCATGAACTTG TCAGATTGGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)