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Oryza sativa
cluster # 7698 cluster # 7698       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7698#0 length = 1712 sequences # 3  
consensus_7698#1 length = 694 sequences # 1  
consensus_7698#2 length = 620 sequences # 1  

consensusID : consensus_7698#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1712
fasta sequence
                              [ACGTCGCCTCGCCTCGTCTGCGTCTGCGTCTGCGTCTGCGTCTCCGTCTCCAACCCAGGCGGCGTAGGGGAAGGAGAAGGAAGGAGAGATCGCGCGGCGCGCTGGCTGTCGCTGTCGCCGTCGCGCAGGCTCGTCCACCTCGCGAAATCGTGAGCTCGCGCGCCGCTCCGGGCATGCAGGGCGCCACGCCGGGCGATGCCGCTGGAGAGGAGGTGGGAGGCGGCGGGGACGTGGTGATGGTGAGGCGGGCGAGCGTGGCGGCGTGCCTGACCTGCCCGCTCTGCGGCCGCCTCCTCCGCGACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGTTCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGAGGGGCAGTAAAGATACATCAAAGAAACTTGGGGGTTGGAGACCATTGGGTTGTCAACTTAAGCTTGGCAAAGACAAAAAATCTCTCAAATCAAGTGTAAAAGATACAAACAGAACCAAAAGTAAGTCTGGTGATACAGATGATGGTGCTCCTGCTAGTAAAGCAAAGGCTAGAGAACCCTTTACAAGATATGGGCGTGCAGCTAAGAGGACTGGAAGAAAGAAATTGTTCATGTTGAAGAACAAAAAGAAAAGGTTCAAGGCAAAGCAGCCCAGTAAAAAGAGGAGATTCCGAGCACTATGGTTTTATCTACTTGCTGCTTTTGACCAGAGAGGAGTACCAACTTTACCACAACTACCAGCAAAGTATTTGAGGATCAAGGATGTTGATTTGCCTGCTTCTATTATACAGAAGTACCTTGCACAGAAACTTAACCTCTCAAGTGAAACTGAGGTAGAAGTGTTGTGTGGTGGCAAAGTAGTGAACCAAGGGATGACACTGCATGATCTAGTAGATTGCTGGCTTGAGAAAGGACCAAAGAGCCGAATGCGCTCATCGGTAGGCTCCCCGGCCACTGGATTCATGGTGACATTGTTCTATAGAAGGCCAGATGTGGATGTGTCCTCATCCCCAGCTCCACCCCAACCTGACACTGAAAGTTGCCATAGCTGATGCAGAGCTTTGCTTCGTTTCTGAACCATCTGTGATTGGCTTCACTCATTGGGCTGTCAGCCCTTGATTGATCTGCGAATCGGTTCCAATTTGTGTGAGGCTCAAGCCACACCAATTCACTAATATGTAGATAAATGCTACTAATTTTACAAGCCATGTTGGGCTTCTGATCATCTACCTTCTTCAACCATTATTTTCCTTTTTTTTCTCTTCAACCATTGTACCTAGGTATGTGATCTGTAATGAGATGTTAATCGTTAAGTATCAGTTGTTAGAGCTAGGGACTTCATGTTGTCTCCACGTAGCTAGTAGTACTAGATTATGCTTGTGTATTTGAATTTGCTGGTGCATTCATCATGCATGTATATATATAAGCTCTGG]

[+] EMBL AK071950             [ACGTCGCCTCGCCTCGTCTGCGTCTGCGTCTGCGTCTGCGTCTCCGTCTCCAACCCAGGCGGCGTAGGGGAAGGAGAAGGAAGGAGAGATCGCGCGGCGCGCTGGCTGTCGCTGTCGCCGTCGCGCAGGCTCGTCCACCTCGCGAAATCGTGAGCTCGCGCGCCGCTCCGGGCATGCAGGGCGCCACGCCGGGCGATGCCGCTGGAGAGGAGGTGGGAGGCGGCGGGGACGTGGTGATGGTGAGGCGGGCGAGCGTGGCGGCGTGCCTGACCTGCCCGCTCTGCGGCCGCCTCCTCCGCGACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGTTCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGAGGGGCAGTAAAGATACATCAAAGAAACTTGGGGGTTGGAGACCATTGGGTTGTCAACTTAAGCTTGGCAAAGACAAAAAATCTCTCAAATCAAGTGTAAAAGATACAAACAGAACCAAAAGTAAGTCTGGTGATACAGATGATGGTGCTCCTGCTAGTAAAGCAAAGGCTAGAGAACCCTTTACAAGATATGGGCGTGCAGCTAAGAGGACTGGAAGAAAGAAATTGTTCATGTTGAAGAACAAAAAGAAAAGGTTCAAGGCAAAGCAGCCCAGTAAAAAGAGGAGATTCCGAGCACTATGGTTTTATCTACTTGCTGCTTTTGACCAGAGAGGAGTACCAACTTTACCACAACTACCAGCAAAGTATTTGAGGATCAAGGATGTTGATTTGCCTGCTTCTATTATACAGAAGTACCTTGCACAGAAACTTAACCTCTCAAGTGAAACTGAGGTAGAAGTGTTGTGTGGTGGCAAAGTAGTGAACCAAGGGATGACACTGCATGATCTAGTAGATTGCTGGCTTGAGAAAGGACCAAAGAGCCGAATGCGCTCATCGGTAGGCTCCCCGGCCACTGGATTCATGGTGACATTGTTCTATAGAAGGCCAGATGTGGATGTGTCCTCATCCCCAGCTCCACCCCAACCTGACACTGAAAGTTGCCATAGCTGATGCAGAGCTTTGCTTCGTTTCTGAACCATCTGTGATTGGCTTCACTCATTGGGCTGTCAGCCCTTGATTGATCTGCGAATCGGTTCCAATTTGTGTGAGGCTCAAGCCACACCAATTCACTAATATGTAGATAAATGCTACTAATTTTACAAGCCATGTTGGGCTTCTGATCATCTACCTTCTTCAACCATTATTTTCCTTTTTTTTCTCTTCAACCATTGTACCTAGGTATGTGATCTGTAATGAGATGTTAATCGTTAAGTATCAGT                                                                                                                ]
[+] EMBL AK071454             [      CCTCGCCTCGTCTGCGTCTGCGTCTGCGTCTGCGTCTCCGTCTCCAACCCAGGCGGCGTAGGGGAAGGAGAAGGAAGGAGAGATCGCGCGGCGCGCTGGCTGTCGCTGTCGCCGTCGCGCAGGCTCGTCCACCTCGCGAAATCGTGAGCTCGCGCGCCGCTCCGGGCATGCAGGGCGCCACGCCGGGCGATGCCGCTGGAGAGGAGGTGGGAGGCGGCGGGGACGTGGTGATGGTGAGGCGGGCGAGCGTGGCGGCGTGCCTGACCTGCCCGCTCTGCGGCCGCCTCCTCCGCGACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGTTCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGAGGGGCAGTAAAGATACATCAAAGAAACTTGGGGGTTGGAGACCATTGGGTTGTCAACTTAAGCTTGGCAAAGACAAAAAATCTCTCAAATCAAGTGTAAAAGATACAAACAGAACCAAAAGTAAGTCTGGTGATACAGATGATGGTGCTCCTGCTAGTAAAGCAAAGGCTAGAGAACCCTTTACAAGATATGGGCGTGCAGCTAAGAGGACTGGAAGAAAGAAATTGCTCATGTTGAAGAACAAAAAGAAAAGGTTCAAGGCAAAGCAGCCCAGTAAAAAGAGGAGATTCCGAGCACTATGGTTTTATCTACTTGCTGCTTTTGACCAGAG GGAGTACCAACTTTACCACAACTACCAGCAAAGTATTTGAGGATCAAGGATGTTGATTTGCCTGCTTCTATTATACAGAAGTACCTTGCACAGAAACTTAACCTCTCAAGTGAAACTGAGGTAGGAGTGTTGTGTGGTGGCAAAGTAGTGAACCAAGGGATGACACTGCATGATCTAGCAGATTGCTGGCTTGAGAAAGGACCAAAGAGCCGAATGCGCTCATCGGTAGGCTCCCCGGCCACTGGATTCATGGTGACATTGTTCTATAGAAGGCCAGATGTGGATGTGTCCTCATCCCCAGCTCCACCCCAACCTGACACTGAAAGTTGCCATAGCTGATGCAGAGCTTTGCTTCGTTTCTGAACCATCTGTGATTGGCTTCACTCATTGGGCTGTCAGCCCTTGATTGATCTGCGAATCGGTTCCAATTTGTGTGAGGCTCAAGCCACACCAATTCACTAATATGTAGATAAATGCTACTAATTTTACAAGCCATGTTGGGCTTCTGATCATCTACCTTCTTCAACCATTATTTTCCTTTTTTTTCTCTTCAACCATTGTACCTAGGTATGTGATCTGTAATGAGATGTTAATCGTTAAGTATCAGTTGTTAGAGCTAGGGACTTCATGTTGTCTCCACGTAGCTAGTAGTACTAGATTATGCTTGTGTATTTGAATTTGCTGGTGCATTCATCATGCATGTATATATATAAGCTCTGG]
[+] EMBL CF326621             [                                                                                                                                                                                                                                                                                                     CTCCGCGACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGTTCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTTATAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGAGGGGCAGTAAAGATACATCAAAGAAACTTGGGGGTTGGAGACCATTGGGTTGTCAACTTAAGCTTGGCAAAGACAAAAAATCTCTCAAATCAAGTGTAAAAGATACAAACAGAACCAAAAGTAAGTCTGGTGATACAGATGATGGTGCTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_7698#0 ACGTCGCCTCGCCTCGTCTGCGTCTGCGTCTGCGTCTGCGTCTCCGTCTCCAACCCAGGC GGCGTAGGGGAAGGAGAAGGAAGGAGAGATCGCGCGGCGCGCTGGCTGTCGCTGTCGCCG TCGCGCAGGCTCGTCCACCTCGCGAAATCGTGAGCTCGCGCGCCGCTCCGGGCATGCAGG GCGCCACGCCGGGCGATGCCGCTGGAGAGGAGGTGGGAGGCGGCGGGGACGTGGTGATGG TGAGGCGGGCGAGCGTGGCGGCGTGCCTGACCTGCCCGCTCTGCGGCCGCCTCCTCCGCG ACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGT TCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGT TGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCA AACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGA AAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTT TGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGA GGGGCAGTAAAGATACATCAAAGAAACTTGGGGGTTGGAGACCATTGGGTTGTCAACTTA AGCTTGGCAAAGACAAAAAATCTCTCAAATCAAGTGTAAAAGATACAAACAGAACCAAAA GTAAGTCTGGTGATACAGATGATGGTGCTCCTGCTAGTAAAGCAAAGGCTAGAGAACCCT TTACAAGATATGGGCGTGCAGCTAAGAGGACTGGAAGAAAGAAATTGTTCATGTTGAAGA ACAAAAAGAAAAGGTTCAAGGCAAAGCAGCCCAGTAAAAAGAGGAGATTCCGAGCACTAT GGTTTTATCTACTTGCTGCTTTTGACCAGAGAGGAGTACCAACTTTACCACAACTACCAG CAAAGTATTTGAGGATCAAGGATGTTGATTTGCCTGCTTCTATTATACAGAAGTACCTTG CACAGAAACTTAACCTCTCAAGTGAAACTGAGGTAGAAGTGTTGTGTGGTGGCAAAGTAG TGAACCAAGGGATGACACTGCATGATCTAGTAGATTGCTGGCTTGAGAAAGGACCAAAGA GCCGAATGCGCTCATCGGTAGGCTCCCCGGCCACTGGATTCATGGTGACATTGTTCTATA GAAGGCCAGATGTGGATGTGTCCTCATCCCCAGCTCCACCCCAACCTGACACTGAAAGTT GCCATAGCTGATGCAGAGCTTTGCTTCGTTTCTGAACCATCTGTGATTGGCTTCACTCAT TGGGCTGTCAGCCCTTGATTGATCTGCGAATCGGTTCCAATTTGTGTGAGGCTCAAGCCA CACCAATTCACTAATATGTAGATAAATGCTACTAATTTTACAAGCCATGTTGGGCTTCTG ATCATCTACCTTCTTCAACCATTATTTTCCTTTTTTTTCTCTTCAACCATTGTACCTAGG TATGTGATCTGTAATGAGATGTTAATCGTTAAGTATCAGTTGTTAGAGCTAGGGACTTCA TGTTGTCTCCACGTAGCTAGTAGTACTAGATTATGCTTGTGTATTTGAATTTGCTGGTGC ATTCATCATGCATGTATATATATAAGCTCTGG



consensusID : consensus_7698#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [ACGCCACCACCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGTTGAATGATGAGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAGTTGAAAAGCTTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCAAAAGAAAGAAGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGAAAGAGAGATCTATCTCTTCTCTGGTAGTTGATACGCCTACAGTAACACCGACAGGCTTGACAGGGCGACGGACAAGAGCAGTTACCAGGAAAGCTGCTGCCTTGCGTGGCCTTGGTCCTGGTATTGATGATCCTGTGAAAAAGGAAATTGATAATGGTGAAAAGCATGCTCAGAATTCAAGCTTGCCCACTAATTTGGGCAAAGTGCCACAAACAAGAAGACAGATGTCATCAAACGCAGAGGNATCGAACCATTCCTCCAATAAAGATACCGAAGTGATCGCAAGGACCTGGCCGATAAGACTGATGAGCTCTGGAGACCTTTAAATTGTTTGGTAGAAGCTGCAAACAGGNCAAAGTCCTCCCGATCAAGTTCACAGAGTCCATTTGTTAAGAGAGAGCACTTAGTGACTCTCCTGGGNGCACATCTGTTTACAAAACAAAGTCTAGGGATA]

[+] EMBL AU065812             [ACGCCACCACCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGTTGAATGATGAGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAGTTGAAAAGCTTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCAAAAGAAAGAAGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGAAAGAGAGATCTATCTCTTCTCTGGTAGTTGATACGCCTACAGTAACACCGACAGGCTTGACAGGGCGACGGACAAGAGCAGTTACCAGGAAAGCTGCTGCCTTGCGTGGCCTTGGTCCTGGTATTGATGATCCTGTGAAAAAGGAAATTGATAATGGTGAAAAGCATGCTCAGAATTCAAGCTTGCCCACTAATTTGGGCAAAGTGCCACAAACAAGAAGACAGATGTCATCAAACGCAGAGGNATCGAACCATTCCTCCAATAAAGATACCGAAGTGATCGCAAGGACCTGGCCGATAAGACTGATGAGCTCTGGAGACCTTTAAATTGTTTGGTAGAAGCTGCAAACAGGNCAAAGTCCTCCCGATCAAGTTCACAGAGTCCATTTGTTAAGAGAGAGCACTTAGTGACTCTCCTGGGNGCACATCTGTTTACAAAACAAAGTCTAGGGATA]


>consensus_7698#1 ACGCCACCACCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGT TGAATGATGAGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAG TTGAAAAGCTTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCA AAAGAAAGAAGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGA AAGAGAGATCTATCTCTTCTCTGGTAGTTGATACGCCTACAGTAACACCGACAGGCTTGA CAGGGCGACGGACAAGAGCAGTTACCAGGAAAGCTGCTGCCTTGCGTGGCCTTGGTCCTG GTATTGATGATCCTGTGAAAAAGGAAATTGATAATGGTGAAAAGCATGCTCAGAATTCAA GCTTGCCCACTAATTTGGGCAAAGTGCCACAAACAAGAAGACAGATGTCATCAAACGCAG AGGNATCGAACCATTCCTCCAATAAAGATACCGAAGTGATCGCAAGGACCTGGCCGATAA GACTGATGAGCTCTGGAGACCTTTAAATTGTTTGGTAGAAGCTGCAAACAGGNCAAAGTC CTCCCGATCAAGTTCACAGAGTCCATTTGTTAAGAGAGAGCACTTAGTGACTCTCCTGGG NGCACATCTGTTTACAAAACAAAGTCTAGGGATA



consensusID : consensus_7698#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 620
fasta sequence
                              [GCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGGTATGTAGTTCTCTTGTAATGGTTCCCCTGAGAATCGGATGTGTGAAGAATTCTAATTTTTTATCTGTAAATCCACTGTTAGAATTGTTCAAATGAATGTGACTCTGCATCACCAGAATGCTGTAAGCAACCCTATAGGTTAGGTCATACCATGTATTTCCATTGTTTTAGTGCCATAGAGCCATCTACATGGTATGCCAGCTATTGTCGTATTATTGCAGCTGGCACAATCACAGATGTGTGCTAGGTAACAGTTCTTGGCACTGTCCGCATGTGTTATTGGTATGCTAAAGGTTGTGATAGTCAACATGTGAATATTTACGGGCTAATACATAACAAATGGTTATCTGAATC]

[+] EMBL CB097148             [GCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGGTATGTAGTTCTCTTGTAATGGTTCCCCTGAGAATCGGATGTGTGAAGAATTCTAATTTTTTATCTGTAAATCCACTGTTAGAATTGTTCAAATGAATGTGACTCTGCATCACCAGAATGCTGTAAGCAACCCTATAGGTTAGGTCATACCATGTATTTCCATTGTTTTAGTGCCATAGAGCCATCTACATGGTATGCCAGCTATTGTCGTATTATTGCAGCTGGCACAATCACAGATGTGTGCTAGGTAACAGTTCTTGGCACTGTCCGCATGTGTTATTGGTATGCTAAAGGTTGTGATAGTCAACATGTGAATATTTACGGGCTAATACATAACAAATGGTTATCTGAATC]


>consensus_7698#2 GCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGTTGGAGAAACTCAGAGTTGATC ACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCAAACGAAGGAAGGTTGAGAACC CAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGAAAGAAAGATCACTATCTTCAC TTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTTTGACAAAGAGGAGAACGAAAG CTTCGTGCTTACGCAACTTTCCTTTGGTATGTAGTTCTCTTGTAATGGTTCCCCTGAGAA TCGGATGTGTGAAGAATTCTAATTTTTTATCTGTAAATCCACTGTTAGAATTGTTCAAAT GAATGTGACTCTGCATCACCAGAATGCTGTAAGCAACCCTATAGGTTAGGTCATACCATG TATTTCCATTGTTTTAGTGCCATAGAGCCATCTACATGGTATGCCAGCTATTGTCGTATT ATTGCAGCTGGCACAATCACAGATGTGTGCTAGGTAACAGTTCTTGGCACTGTCCGCATG TGTTATTGGTATGCTAAAGGTTGTGATAGTCAACATGTGAATATTTACGGGCTAATACAT AACAAATGGTTATCTGAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7698#0      ACGTCGCCTCGCCTCGTCTGCGTCTGCGTCTGCGTCTGCGTCTCCGTCTCCAACCCAGGC 60
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      GGCGTAGGGGAAGGAGAAGGAAGGAGAGATCGCGCGGCGCGCTGGCTGTCGCTGTCGCCG 120
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TCGCGCAGGCTCGTCCACCTCGCGAAATCGTGAGCTCGCGCGCCGCTCCGGGCATGCAGG 180
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      GCGCCACGCCGGGCGATGCCGCTGGAGAGGAGGTGGGAGGCGGCGGGGACGTGGTGATGG 240
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TGAGGCGGGCGAGCGTGGCGGCGTGCCTGACCTGCCCGCTCTGCGGCCGCCTCCTCCGCG 300
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      ACGCCACCACCATCTCCGAGTGCCTCCACACCTTCTGCAGAAAGTGTATACATGAGGAGT 360
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ACGCCACCACCGTCTCCGAGTGCCTCCACACCTTTTGCAGAAAGTGTATATATGAGAAGT 60
                                                                                  

consensus_7698#0      TCGTCGATAAGGAGTCCTGCTGCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGT 420
consensus_7698#2      ---------------------GCTGCCCTACTTGCAACATTGATCTGGGGTGTGCTCCGT 39
consensus_7698#1      TGAATGATGAGGAGGTAGAATCCTGCCCAGTATGTAAAATTGATCTTGGCTGCACTCCAG 120
                                            ******    ** ** ******** ** **  ****  

consensus_7698#0      TGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCA 480
consensus_7698#2      TGGAGAAACTCAGAGTTGATCACAGTATGCAATTCGTAAGGTCAAGGATATTTCCTTTCA 99
consensus_7698#1      TTGAAAAGCTTAGGGCTGATCACAATCTACAAGATGTAAGGTCAAAAATATTTCCATTCA 180
                      * ** ** ** ** * ******** * * ***   **********  ******** ****

consensus_7698#0      AACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGA 540
consensus_7698#2      AACGAAGGAAGGTTGAGAACCCAGAAATCATTTGTCCAGTTGCGTCACCTGTCAAGAGGA 159
consensus_7698#1      AAAGAAAGAAGATTAGTGCTGACGAAGTAGCAGCTCCTGTTTTACTTCCCAGTAAAAGGA 240
                      ** *** **** **         *** *      *** ***      **    ** ****

consensus_7698#0      AAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTT 600
consensus_7698#2      AAGAAAGATCACTATCTTCACTTACAATCCCTGCTCCTCAGGTGTCTATACAGAAATGTT 219
consensus_7698#1      AAGAGAGATCTATCTCTTCTCTGGTAGTTGATACGCCTACAGTA---ACACCGACAGGCT 297
                      **** *****  * ***** **   * *   * * ***   **    * ** ** * * *

consensus_7698#0      TGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGCATTCTACCTCGA 660
consensus_7698#2      TGACAAAGAGGAGAACGAAAGCTTCGTGCTTACGCAACTTTCCTTTGGTATGTAGTTCTC 279
consensus_7698#1      TGACAGGGCGACGGACAAGAGCA--GTTACCAGGAAAGCTGC-TGCCTTGCGTGGCCTTG 354
                      *****  * *  * ** * ***   **    * * **  * * *        *       

consensus_7698#0      GGGGCAGTAAAGATACATCAAAGAAACTTGGGGGT-TGGAGACCATTGGGTTGTCAACTT 719
consensus_7698#2      ----TTGTAATGGTTCCCCTGAGAA--TCGGATGTGTGAAGAATTCTAATTTTTTATCTG 333
consensus_7698#1      GTCCTGGTATTGATGATCCTGTGAAA---AAGGAAATTGATAATGGTGAAAAGCATGCTC 411
                            ***  * *    *   ***           *  * *    *          ** 

consensus_7698#0      AAGCTTGGCAAAGACAAAAAATCTCTCA--AATCAAGTGTAAAAGATACAAACAGAA--C 775
consensus_7698#2      TAAATCCACTGT----TAGAATTGTTCA--AATGAATGTGACTCTGCATCACCAGAATGC 387
consensus_7698#1      AGAATTC----------AAGCTTGCCCACTAATTTGGGCAAAGTGCCACAAACAAGAAGA 461
                          *            *   *    **  ***       *      *  * **  *   

consensus_7698#0      CAAAAGTAAGTCTGGTGATACAGATGATGGTGCTCCTGCTAGTAAAGCAAAGGCTAGAGA 835
consensus_7698#2      TGTAAGCAACCCTATAGGT-TAGGTCATACCATGTATTTCCATTGTTTTAGTGCCATAGA 446
consensus_7698#1      CAGATGTCATCAAACGCAGAGGNATCGAACCATTCCT-CCAATAAAGATACCG-----AA 515
                         * *  *               *           *     *      *  *      *

consensus_7698#0      ACCCTTTACAAGATATGGGCGTGCAGCTAA--GAGGACTGGAAGAAAGAAATTGTTCATG 893
consensus_7698#2      GCCATCTACATGGTATGCCAGCTATTGTCG--TATTATTGCAGCTGGCACAAT-----CA 499
consensus_7698#1      GTGATCGCAAGGACCTGGCCGATAAGACTGATGAGCTCTGGAGACCTTTAAAT-----TG 570
                          *    * *   **   *            *    ** *        * *       

consensus_7698#0      TTGAAGAACAAAAAGAAAAGGTTCAAGGCAAAGCAGCCCAGTAAAAAGAGGAGATTCCGA 953
consensus_7698#2      CAGATGTGTGCTAGGTAACAGTTCTTGGCACTGT--CCGCATGTGTTATTGGTATGCTAA 557
consensus_7698#1      TTTGGTAGAAGCTGCAAACAGGNCAAAGTCCT----CCCGATCAAGTTCACAGAGTCCAT 626
                                      **  *  *   *        **   *           *  *   

consensus_7698#0      GCACTATGGTTTTATCTACTTGCTGCTTTTGACCAGAGAGGA-GTACCAACT--TTACCA 1010
consensus_7698#2      AGGTTGTGATA--GTCAACATGTGAATATTTACGGGCTAATACATAACAAATGGTTATCT 615
consensus_7698#1      TTGTTAAGAGA--GAGCACTTAGTGACTCTCCTGGGNGCACATCTGTTTACA---AAACA 681
                          *  *         ** *        *     *     *  *    *      * * 

consensus_7698#0      CAACTACCAGCAAAGTATTTGAGGATCAAGGATGTTGATTTGCCTGCTTCTATTATACAG 1070
consensus_7698#2      GAATC------------------------------------------------------- 620
consensus_7698#1      AAGTCTAGGGATA----------------------------------------------- 694
                       *                                                          

consensus_7698#0      AAGTACCTTGCACAGAAACTTAACCTCTCAAGTGAAACTGAGGTAGAAGTGTTGTGTGGT 1130
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      GGCAAAGTAGTGAACCAAGGGATGACACTGCATGATCTAGTAGATTGCTGGCTTGAGAAA 1190
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      GGACCAAAGAGCCGAATGCGCTCATCGGTAGGCTCCCCGGCCACTGGATTCATGGTGACA 1250
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TTGTTCTATAGAAGGCCAGATGTGGATGTGTCCTCATCCCCAGCTCCACCCCAACCTGAC 1310
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      ACTGAAAGTTGCCATAGCTGATGCAGAGCTTTGCTTCGTTTCTGAACCATCTGTGATTGG 1370
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      CTTCACTCATTGGGCTGTCAGCCCTTGATTGATCTGCGAATCGGTTCCAATTTGTGTGAG 1430
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      GCTCAAGCCACACCAATTCACTAATATGTAGATAAATGCTACTAATTTTACAAGCCATGT 1490
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TGGGCTTCTGATCATCTACCTTCTTCAACCATTATTTTCCTTTTTTTTCTCTTCAACCAT 1550
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TGTACCTAGGTATGTGATCTGTAATGAGATGTTAATCGTTAAGTATCAGTTGTTAGAGCT 1610
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      AGGGACTTCATGTTGTCTCCACGTAGCTAGTAGTACTAGATTATGCTTGTGTATTTGAAT 1670
consensus_7698#2      ------------------------------------------------------------
consensus_7698#1      ------------------------------------------------------------
                                                                                  

consensus_7698#0      TTGCTGGTGCATTCATCATGCATGTATATATATAAGCTCTGG 1712
consensus_7698#2      ------------------------------------------
consensus_7698#1      ------------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)