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Oryza sativa
cluster # 7699 cluster # 7699       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7699#0 length = 2275 sequences # 5  

consensusID : consensus_7699#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2275
fasta sequence
                              [TCACCCCCCACCTTGACCTCCGCTTCGAATTCGAATTCGAATCCGATGGATTCGATTCGCCGTCGATCTGCCGGAGGCATCCTCGGCATCCTCTTTCTGGTGCTGCTCCGGTGGGCGGGGGCGGGGGATCCCTATGCCTACTACGAGTGGGAGGTATCGTACGTGTGGGGTGCGCCGCTGGGCGGAGTGAAGAAGCAGGAGGCGATTGGCATCAACGGGCAGCTGCCGGGGCCGGCGCTGAACGTGACGACCAACTGGAACCTGGTGGTGAACGTGAGGAACGGCCTGGACGAGCCGCTGCTGCTGACGTGGCACGGGGTGCAGCAGCGCAAGAGCCCCTGGCAGGACGGCGTGGGCGGCACAAACTGCGGCATCCCGCCGGGGTGGAACTGGACGTACCAGTTCCAGGTGAAGGACCAGGTCGGCAGCTTCTTCTACGCCCCCTCCACCGCCCTCCACCGCGCCGCCGGCGGCTACGGCGCCATCACCATCAACAACCGCGACGTCATCCCCTTGCCCTTCCCCCTCCCCGACGGCGGCGACATCACCCTCTTCCTCGCCGACTGGTACGCCAGGGACCACAGGGCCCTGCGCCGCGCCCTCGACGCCGGCGACCCCCTCGGCCCCCCCGACGGGGTGCTCATCAACGCCCTCGGCCCCTACCGCTACAACGACACCCTCGTCCCGCCGGGCGTCACCTACGAGCGCATCAATGTCGACCCGGGGAGGACCTACCGCCTGCGCGTCCACAACGTCGGCGTCGCCACCAGCCTCAATTTCAGAATCCAGGGCCACAACCTGCTGCTCGTCGAGGCCGAGGGCTCCTACACTTCACAGCAGAACTACACCAACATGGACATCCATGTCGGCCAGTCCTACTCCTTCCTTCTCACCATGGACCAGAACGCCTCCACCGACTACTACGTCGTCGCCAGCGCCCGTTTCGTCCCCGACGCCGACAAGCTCACCGGCGTCGCCATCCTCCACTACTCCAACTCCCAGGGCCCGCCCTCTGGCTCTCTCCCTGATGCCCCAGATGACCAGTACGACACCGCTTTCTCCATCAACCAAGCAAGATCAATCAGATGGAATGTTACAGCCAGTGGTGCCCGCCCCAATCCGCAGGGCTCATTCCATTACGGCGACATTACCGTCACCGATGTGTACCTGCTGCAGAGCATGCCACCGGAGCTCATAGACGGCCAGATGCGTGCTACTCTCAATGGAATTTCTTATATTGCTCCATCGACTCCTTTGATGCTCGCTCAGCTCTTTAATGTCCCGGGAGTCTACAAACTGGATTTTCCTAATCGTCCTATGAACAGGTTACCAAAGCTTGACACCTCCATTATCAATGGCACCTACAAAGGCTTTATGGAGATCATATTCCAAAACAACGCCACATCCGTGCAGAGCTACCACTTGGATGGATATGCATTCTTTGTTGTTGGGATGGACTATGGACTGTGGACAGACAACAGCCGCGGTACATACAACAAATGGGATGGCGTTGCACGCTCCACAATTCAGGTATTCCCTGGCGCTTGGACGGCTGTCCTTGTCTTTCTTGACAATGCGGGTATATGGAATCTGCGGGTGGAGAACCTGGACGCCTGGTACCTGGGGCAAGAAGTGTACATCAGTGTGGTTAACCCGGAGGATAGCAGCAACAAGACCGTGCTTCCTCTTCCCGACAACGCGATTTTCTGTGGTGCGCT-GTCAAGTTTACAAAAGGAGCAATCGCATAGATTCCAATACTCAGAAG-CTTCTCAGAT-AACGCAGCTG-TGGAAGAT-GGTTTTCTTCATGGCATGGTTGGCCCTTTGGTAGAGCTTAATTAGATCTGTCTGCTGGGGTGATCCGGAGACGAGA-GAGCTCAGAGCTGGTCCCAAACATGGATGAGCTCTCAGCTCAAGTTAGTAGGGTGGTGAATTTTGTCAGATTCGAATTGGTTAGATTGGACTTGAGTGATGATCCTGTCTGGGAAGGGCAAAGAGTAGGAGGAAGCATTGGGAAGGCATACACACGCTTGACTTGATTTGGCTTGAAGTCGAGCTAGCAGGTTGCTCATTAGCCGTTGTGTGATATCTGAAGATCAACTTACTACCCAAACCTAGACTCACAGAAACCAATTGATTGATATGGATTAAGACCTGAAGCTTCTTGGGTTTTCCTAAGTAATCCATTTGTTGGTGGTTACGGTATCCTTTTTCTTGTATTGACAGCAAGCAGAAAGTTGTTTTAAAAGAACAGCAGGCAGAAAGAAAATAATTATGGT]

[+] EMBL AK101455             [TCACCCCCCACCTTGACCTCCGCTTCGAATTCGAATTCGAATCCGATGGATTCGATTCGCCGTCGATCTGCCGGAGGCATCCTCGGCATCCTCTTTCTGGTGCTGCTCCGGTGGGCGGGGGCGGGGGATCCCTATGCCTACTACGAGTGGGAGGTATCGTACGTGTGGGGTGCGCCGCTGGGCGGAGTGAAGAAGCAGGAGGCGATTGGCATCAACGGGCAGCTGCCGGGGCCGGCGCTGAACGTGACGACCAACTGGAACCTGGTGGTGAACGTGAGGAACGGCCTGGACGAGCCGCTGCTGCTGACGTGGCACGGGGTGCAGCAGCGCAAGAGCCCCTGGCAGGACGGCGTGGGCGGCACAAACTGCGGCATCCCGCCGGGGTGGAACTGGACGTACCAGTTCCAGGTGAAGGACCAGGTCGGCAGCTTCTTCTACGCCCCCTCCACCGCCCTCCACCGCGCCGCCGGCGGCTACGGCGCCATCACCATCAACAACCGCGACGTCATCCCCTTGCCCTTCCCCCTCCCCGACGGCGGCGACATCACCCTCTTCCTCGCCGACTGGTACGCCAGGGACCACAGGGCCCTGCGCCGCGCCCTCGACGCCGGCGACCCCCTCGGCCCCCCCGACGGGGTGCTCATCAACGCCCTCGGCCCCTACCGCTACAACGACACCCTCGTCCCGCCGGGCGTCACCTACGAGCGCATCAATGTCGACCCGGGGAGGACCTACCGCCTGCGCGTCCACAACGTCGGCGTCGCCACCAGCCTCAATTTCAGAATCCAGGGCCACAACCTGCTGCTCGTCGAGGCCGAGGGCTCCTACACTTCACAGCAGAACTACACCAACATGGACATCCATGTCGGCCAGTCCTACTCCTTCCTTCTCACCATGGACCAGAACGCCTCCACCGACTACTACGTCGTCGCCAGCGCCCGTTTCGTCCCCGACGCCGACAAGCTCACCGGCGTCGCCATCCTCCACTACTCCAACTCCCAGGGCCCGCCCTCTGGCTCTCTCCCTGATGCCCCAGATGACCAGTACGACACCGCTTTCTCCATCAACCAAGCAAGATCAATCAGATGGAATGTTACAGCCAGTGGTGCCCGCCCCAATCCGCAGGGCTCATTCCATTACGGCGACATTACCGTCACCGATGTGTACCTGCTGCAGAGCATGCCACCGGAGCTCATAGACGGCCAGATGCGTGCTACTCTCAATGGAATTTCTTATATTGCTCCATCGACTCCTTTGATGCTCGCTCAGCTCTTTAATGTCCCGGGAGTCTACAAACTGGATTTTCCTAATCGTCCTATGAACAGGTTACCAAAGCTTGACACCTCCATTATCAATGGCACCTACAAAGGCTTTATGGAGATCATATTCCAAAACAACGCCACATCCGTGCAGAGCTACCACTTGGATGGATATGCATTCTTTGTTGTTGGGATGGACTATGGACTGTGGACAGACAACAGCCGCGGTACATACAACAAATGGGATGGCGTTGCACGCTCCACAATTCAGGTATTCCCTGGCGCTTGGACGGCTGTCCTTGTCTTTCTTGACAATGCGGGTATATGGAATCTGCGGGTGGAGAACCTGGACGCCTGGTACCTGGGGCAAGAAGTGTACATCAGTGTGGTTAACCCGGAGGATAGCAGCAACAAGACCGTGCTTCCTCTTCCCGACAACGCGATTTTCTGTGGTGCGCT GTCAAGTTTACAAAAGGAGCAATCGCATAGATTCCAATACTCAGAAG CTTCTCAGAT AACGCAGCTG TGGAAGAT GGTTTTCTTCATGGCATGGTTGGCCCTTTGGTAGAGCTTAATTAGATCTGTCTGCTGGGGTGATCCGGAGACGAGA GAGCTCAGAGCTGGTCCCAAACATGGATGAGCTCTCAGCTCAAGTTAGTAGGGTGGTGAATTTTGTCAGATTCGAATTGGTTAGATTGGACTTGAGTGATGATCCTGTCTGGGAAGGGCAAAGAGTAGGAGGAAGCATTGGGAAGGCATACACACGCTTGACTTGATTTGGCTTGAAGTCGAGCTAGCAGGTTGCTCATTAGCCGTTGTGTGATATCTGAAGATCAACTTACTACCCAAACCTAGACTCACAGAAACCAATTGATTGATATGGA                                                                                                                                    ]
[+] EMBL CA753498             [                                                                                                                                                                                                      GAGGCGATTGGCATCAACGGGCAGCTGCCGGGGCCGGCGCTGAACGTGACGACCAACTGGAACCTGGTGGTGAACGTGAGGAACGGCCTGGACGAGCCGCTGCTGCTGACGTGGCACGGGGTGCAGCAGCGCAAGAGCCCCTGGCAGGACGGCGTGGGCGGCACAAACTGCGGCATCCCGCCGGGGTGGAACTGGACGTACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C73552               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAACGCCACATCCGTGCAGAGCTACCACTTGGATGGATATGCATTCTTTGTTGTTGGGATGGACTATGGACTGTGGACAGACAACAGCCGCGGTACATACAACAAATGGGATGGCGTTGCACGCTCCACAATTCAGGTATTCCCTGGCGCTTGGACGGCTGTCCTTGTCTTTCTTGACAATGCGGGTATATGGAATCTGCGGGTGGAGAACCTGGACGCCTGGTACCTGGGGCAAGAAGTGTACATCAGTGTGGTTAACCCGGAGGATAGCAGCCACAAGACCGTGCTTTCTCTTCCCGACAACGCGANTTTCTGTGGTGCGCTGGTCAAGTTTACAAAGGGAGCCATCGCATAGATTCCAATACTCAGAAGCCTTCTCAGATAAACGC NCTGTTGGAAAATGGGTTTCCTTCATGGCATGGTTtgnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB641194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCT GTCAAGTTTACAAAAGGAGCAATCGCATAGATTCCAATACTCAGAAG CTTCTCAGAT AACGCAGCTG TGGAAGAT GGTTTTCTTCATGGCATGGTTGGCCCTTTGGTAGAGCTTAATTAGATCTGTCTGCTGGGGTGATCCGGAGACGAGA GAGCTCAGAGCTGGTCCCAAACATGGATGAGCTCTCAGCTCAAGTTAGTAGGGTGGTGAATTTTGTCAGATTCGAATTGGTTAGATTGGACTTGAGTGATGATCCTGTCTGGGAAGGGCAAAGAGTAGGAGGAAGCATTGGGAAGGCATACACACGCTTGACTTGATTTGGCTTGAAGTCGAGCTAGCAGGTTGCTCATTAGCCGTTGTGTGATATCTGAAGATCAACTTACTACCCAAACCTAGACTCACAGAAACCAATTGATTGATATGGATTAAGACCTGAAGCTTCTTGGGTTTTCCTAAGTAATCCATTTGTTGGTGGTTACGGTATCCTTTTTCTTGTATTGACAGCAAGCAGAAAGTTGTTTTAAAAGAACAGCAGGCAGAAAGAAAATAATTATGGT]
[+] EMBL CB640945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCT GTCAAGTTTACAAAAGGAGCAATCGCATAGATTCCAATACTCAGAAG CTTCTCAGAT AACGCAGCTG TGGAAGAT GGTTTTCTTCATGGCATGGTTGGCCCTTTGGTAGAGCTTAATTAGATCTGTCTGCTGGGGTGATCCGGAGACGAGACTAGCTCAGAGCTGGTCCCAAACATGGATGAGCTCTCAGCTCAAGTTAGTAGGGTGGTGAATTTTGTCAGATTCCAATTGGTTACATTGGACTTGAGTGATGATCCTGTCTGGGAAGGGCAAAGAGTACGAGGAAGCATCGGGAAAGCATACACACGCTTGACTCGATTTGGCTTGAAGTCGATCTAGCACGTTGCTCATTATCCGTTGCGTGATATCTGAAGATCAA                                                                                                                                                                                   ]


>consensus_7699#0 TCACCCCCCACCTTGACCTCCGCTTCGAATTCGAATTCGAATCCGATGGATTCGATTCGC CGTCGATCTGCCGGAGGCATCCTCGGCATCCTCTTTCTGGTGCTGCTCCGGTGGGCGGGG GCGGGGGATCCCTATGCCTACTACGAGTGGGAGGTATCGTACGTGTGGGGTGCGCCGCTG GGCGGAGTGAAGAAGCAGGAGGCGATTGGCATCAACGGGCAGCTGCCGGGGCCGGCGCTG AACGTGACGACCAACTGGAACCTGGTGGTGAACGTGAGGAACGGCCTGGACGAGCCGCTG CTGCTGACGTGGCACGGGGTGCAGCAGCGCAAGAGCCCCTGGCAGGACGGCGTGGGCGGC ACAAACTGCGGCATCCCGCCGGGGTGGAACTGGACGTACCAGTTCCAGGTGAAGGACCAG GTCGGCAGCTTCTTCTACGCCCCCTCCACCGCCCTCCACCGCGCCGCCGGCGGCTACGGC GCCATCACCATCAACAACCGCGACGTCATCCCCTTGCCCTTCCCCCTCCCCGACGGCGGC GACATCACCCTCTTCCTCGCCGACTGGTACGCCAGGGACCACAGGGCCCTGCGCCGCGCC CTCGACGCCGGCGACCCCCTCGGCCCCCCCGACGGGGTGCTCATCAACGCCCTCGGCCCC TACCGCTACAACGACACCCTCGTCCCGCCGGGCGTCACCTACGAGCGCATCAATGTCGAC CCGGGGAGGACCTACCGCCTGCGCGTCCACAACGTCGGCGTCGCCACCAGCCTCAATTTC AGAATCCAGGGCCACAACCTGCTGCTCGTCGAGGCCGAGGGCTCCTACACTTCACAGCAG AACTACACCAACATGGACATCCATGTCGGCCAGTCCTACTCCTTCCTTCTCACCATGGAC CAGAACGCCTCCACCGACTACTACGTCGTCGCCAGCGCCCGTTTCGTCCCCGACGCCGAC AAGCTCACCGGCGTCGCCATCCTCCACTACTCCAACTCCCAGGGCCCGCCCTCTGGCTCT CTCCCTGATGCCCCAGATGACCAGTACGACACCGCTTTCTCCATCAACCAAGCAAGATCA ATCAGATGGAATGTTACAGCCAGTGGTGCCCGCCCCAATCCGCAGGGCTCATTCCATTAC GGCGACATTACCGTCACCGATGTGTACCTGCTGCAGAGCATGCCACCGGAGCTCATAGAC GGCCAGATGCGTGCTACTCTCAATGGAATTTCTTATATTGCTCCATCGACTCCTTTGATG CTCGCTCAGCTCTTTAATGTCCCGGGAGTCTACAAACTGGATTTTCCTAATCGTCCTATG AACAGGTTACCAAAGCTTGACACCTCCATTATCAATGGCACCTACAAAGGCTTTATGGAG ATCATATTCCAAAACAACGCCACATCCGTGCAGAGCTACCACTTGGATGGATATGCATTC TTTGTTGTTGGGATGGACTATGGACTGTGGACAGACAACAGCCGCGGTACATACAACAAA TGGGATGGCGTTGCACGCTCCACAATTCAGGTATTCCCTGGCGCTTGGACGGCTGTCCTT GTCTTTCTTGACAATGCGGGTATATGGAATCTGCGGGTGGAGAACCTGGACGCCTGGTAC CTGGGGCAAGAAGTGTACATCAGTGTGGTTAACCCGGAGGATAGCAGCAACAAGACCGTG CTTCCTCTTCCCGACAACGCGATTTTCTGTGGTGCGCTGTCAAGTTTACAAAAGGAGCAA TCGCATAGATTCCAATACTCAGAAGCTTCTCAGATAACGCAGCTGTGGAAGATGGTTTTC TTCATGGCATGGTTGGCCCTTTGGTAGAGCTTAATTAGATCTGTCTGCTGGGGTGATCCG GAGACGAGAGAGCTCAGAGCTGGTCCCAAACATGGATGAGCTCTCAGCTCAAGTTAGTAG GGTGGTGAATTTTGTCAGATTCGAATTGGTTAGATTGGACTTGAGTGATGATCCTGTCTG GGAAGGGCAAAGAGTAGGAGGAAGCATTGGGAAGGCATACACACGCTTGACTTGATTTGG CTTGAAGTCGAGCTAGCAGGTTGCTCATTAGCCGTTGTGTGATATCTGAAGATCAACTTA CTACCCAAACCTAGACTCACAGAAACCAATTGATTGATATGGATTAAGACCTGAAGCTTC TTGGGTTTTCCTAAGTAATCCATTTGTTGGTGGTTACGGTATCCTTTTTCTTGTATTGAC AGCAAGCAGAAAGTTGTTTTAAAAGAACAGCAGGCAGAAAGAAAATAATTATGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)