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Oryza sativa
cluster # 7714 cluster # 7714       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7714#0 length = 2743 sequences # 3  
consensus_7714#1 length = 598 sequences # 1  
consensus_7714#2 length = 224 sequences # 1  

consensusID : consensus_7714#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2743
fasta sequence
                              [AGGCCAGCATCTTTTTTTTAACTGAAAGATTTGTCTTTTCCCCCCTTTTCATCGACATGATTTGTTGAGCCCAATCCCAACTGCTCCACTAACCCTATTTGTTTAAACTTTTTTCCCCACTTCTGTGTTTGCAGGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGTTTGGTTTCTCTCGTCGACGGATGAAGCTTGGAAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTCCTGCTCGGACAAAGCGGTCCAGTCACCCCAATTTTTCACGCTTTGTCCAGGGAGAAGACCAAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATACTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAGAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAGACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTATAATTCTTGAAGCTCATTGTTCTCTCACTAGTCACTACTCATGTCCTTGCATTTATTTATAATCAGGATTATCAGTTGATGTATGACCTATTGTTCTGATTTTACTGGAATTGAATTCTCATAGCCTCCTTGTCAAAGTAGTAGATGTAACTACGACACAAAGTACTTGCTTTTTGAAATTTTAGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTTGAATTATAAAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGATAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGCTCTAGACTTCGAAACGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACCTCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAGCAAGAAAAAGCGTCATCCGGAAACTTGGGTTTTTGACATTCTGGAATCCAAGTGGTCTGTTTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGGATTCAGCATGGTTCCGTTGTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGATAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCCTGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCACCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGCCACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACCTAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGCCCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGAGCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGATGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAAAATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACCTTCAGCGGCAATGGCAAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGAGAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATTAGAGCTGGCGCAAGAAGAATCAAACA-GCCTCTCAAACACCGTCCATGCTGACAATGTGCGCCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTGTATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACCATAAGTTTTGGTCCATCCATGAAGAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGTAACTCAGCAGAAGATGTTAATTATTAAAGACCCAAAATGATACTCTCCATCTATGTTCATCTACCAGTCTTGGAAGGAAATTAAATTCATTTTCGCAGGGTCC]

[+] EMBL AK103782             [AGGCCAGCATCTTTTTTTTAACTGAAAGATTTGTCTTTTCCCCCCTTTTCATCGACATGATTTGTTGAGCCCAATCCCAACTGCTCCACTAACCCTATTTGTTTAAACTTTTTTCCCCACTTCTGTGTTTGCAGGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGTTTGGTTTCTCTCGTCGACGGATGAAGCTTGGAAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTCCTGCTCGGACAAAGCGGTCCAGTCACCCCAATTTTTCACGCTTTGTCCAGGGAGAAGACCAAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATACTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAGAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAGACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTATAATTCTTGAAGCTCATTGTTCTCTCACTAGTCACTACTCATGTCCTTGCATTTATTTATAATCAGGATTATCAGTTGATGTATGACCTATTGTTCTGATTTTACTGGAATTGAATTCTCATAGCCTCCTTGTCAAAGTAGTAGATGTAACTACGACACAAAGTACTTGCTTTTTGAAATTTTAGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTTGAATTATAAAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGATAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGCTCTAGACTTCGAAACGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACCTCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAGCAAGAAAAAGCGTCATCCGGAAACTTGGGTTTTTGACATTCTGGAATCCAAGTGGTCTGTTTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGGATTCAGCATGGTTCCGTTGTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGATAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCCTGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCACCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGCCACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACCTAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGCCCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGAGCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGATGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAAAATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACCTTCAGCGGCAATGGCAAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGAGAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATTAGAGCTGGCGCAAGAAGAATCAAACA GCCTCTCAAACACCGTCCATGCTGACAATGTGCGCCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTGTATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACCATAAGTTTTGGTCCATCCATGAAGAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGTAACTCAGCAGAAGATGTTAATTA                                                                                ]
[+] EMBL AU097334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCAAGAAGAATCAAACANGCCTCTCAAACACCGTCCATGCTGACAATGTGCG CTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTGTATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACCATAAGTTTTGGTCCATCCATGAAGAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGTAACTCAGCAGAAGATGTTAATTATTAAAGACCCAAAA                                                                  ]
[-] EMBL CF326208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCACTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGTGTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACCTCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTGTATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACCATAAGTTTTGGTCCATCCATAAAAAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGTAACTCAGCAGAAGATGTTAATTATTAAAGACCCAAATTGATACTCTCCATCTATGTTCATCTACCAGTCTTGGAAGGAAATTAAATTCATTTTCGCAGGGTCC]


>consensus_7714#0 AGGCCAGCATCTTTTTTTTAACTGAAAGATTTGTCTTTTCCCCCCTTTTCATCGACATGA TTTGTTGAGCCCAATCCCAACTGCTCCACTAACCCTATTTGTTTAAACTTTTTTCCCCAC TTCTGTGTTTGCAGGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTT TTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGTTTGGTTTCTCTCGTCGAC GGATGAAGCTTGGAAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTC CTGCTCGGACAAAGCGGTCCAGTCACCCCAATTTTTCACGCTTTGTCCAGGGAGAAGACC AAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATA CTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAG AAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGG TGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAG ACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTC CAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTATAATTCTTGAAGCTCATTGTTCTCT CACTAGTCACTACTCATGTCCTTGCATTTATTTATAATCAGGATTATCAGTTGATGTATG ACCTATTGTTCTGATTTTACTGGAATTGAATTCTCATAGCCTCCTTGTCAAAGTAGTAGA TGTAACTACGACACAAAGTACTTGCTTTTTGAAATTTTAGGTTCCATGGGGGAAGAATGT CATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAA TACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAG TGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAA AGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTT GAATTATAAAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGA TAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGC TCTAGACTTCGAAACGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACC TCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAG CAAGAAAAAGCGTCATCCGGAAACTTGGGTTTTTGACATTCTGGAATCCAAGTGGTCTGT TTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGGATTCAGCATGGTTCCGTT GTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGA TAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCC TGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCA CCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGC CACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACC TAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGC CCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGA GCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGA TGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAA AATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACCTTCAGCGGCAATGGC AAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGA GAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATT AGAGCTGGCGCAAGAAGAATCAAACAGCCTCTCAAACACCGTCCATGCTGACAATGTGCG CCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCA CTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGT GTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACC TCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTG TATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACC ATAAGTTTTGGTCCATCCATGAAGAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGT AACTCAGCAGAAGATGTTAATTATTAAAGACCCAAAATGATACTCTCCATCTATGTTCAT CTACCAGTCTTGGAAGGAAATTAAATTCATTTTCGCAGGGTCC



consensusID : consensus_7714#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence
                              [GAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAGACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCCTTGAATTATAAAGGTGCTGGACCTTCTCCAAGATCCATTCATGTGGCTGCTCTGTATGATGATAGAATCCTATTGATCTTGGGAGGCCAATCAAAATCCAAAACCCTCAATGATGTTCATGCTCTAN]

[+] EMBL CA753281             [GAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGGTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAGACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTCCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTTCCATGGGGGAAGAATGTCATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCCTTGAATTATAAAGGTGCTGGACCTTCTCCAAGATCCATTCATGTGGCTGCTCTGTATGATGATAGAATCCTATTGATCTTGGGAGGCCAATCAAAATCCAAAACCCTCAATGATGTTCATGCTCTAN]


>consensus_7714#1 GAAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATG GTGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTA GACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCT CCAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTTCCATGGGGGAAGAATGTCATTCTT GTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAATACTGAA ACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAGTGGCCAT ACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAAAGGGAAG AAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCCTTGAATTAT AAAGGTGCTGGACCTTCTCCAAGATCCATTCATGTGGCTGCTCTGTATGATGATAGAATC CTATTGATCTTGGGAGGCCAATCAAAATCCAAAACCCTCAATGATGTTCATGCTCTAN



consensusID : consensus_7714#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence
                              [GNCTTCTTCTCTTCCATAGCTGGTGCAATTTATGTTCTTGGCAGTGTGACCGCTCTTGCTTGCTTGCTACTGCTGCTGCTCCGATCCAAGAAGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGAGTTGGNTTCTCTCGTCGACGGATGAAGCTTNGAAGGTTTAAGGG]

[+] EMBL OSS4129A             [GNCTTCTTCTCTTCCATAGCTGGTGCAATTTATGTTCTTGGCAGTGTGACCGCTCTTGCTTGCTTGCTACTGCTGCTGCTCCGATCCAAGAAGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGAGTTGGNTTCTCTCGTCGACGGATGAAGCTTNGAAGGTTTAAGGG]


>consensus_7714#2 GNCTTCTTCTCTTCCATAGCTGGTGCAATTTATGTTCTTGGCAGTGTGACCGCTCTTGCT TGCTTGCTACTGCTGCTGCTCCGATCCAAGAAGAGAGAAGAGATTGTGCTAGTAGGGTTT AGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGA GTTGGNTTCTCTCGTCGACGGATGAAGCTTNGAAGGTTTAAGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7714#0      AGGCCAGCATCTTTTTTTTAACTGAAAGATTTGTCTTTTCCCCCCTTTTCATCGACATGA 60
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TTTGTTGAGCCCAATCCCAACTGCTCCACTAACCCTATTTGTTTAAACTTTTTTCCCCAC 120
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TTCTGTGTTTGCAGGAGAGAAGAGATTGTGCTAGTAGGGTTTAGTTTAGTCATTCCTGTT 180
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TTGGGTAAATTGGATTTGAAGAGGACGCAATGCCGAAGATGTTTGGTTTCTCTCGTCGAC 240
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      GGATGAAGCTTGGAAGGTTGAAGGGTCATTTGCATGATCCTTTTCATGGCTCCCGGAGTC 300
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CTGCTCGGACAAAGCGGTCCAGTCACCCCAATTTTTCACGCTTTGTCCAGGGAGAAGACC 360
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AAGTGACCACATCAGTGAGCGGCCGAGCTGACGACCTTGCTTGGCGCTGCTCATCTGATA 420
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CTTTTGATCTCAATGGCCGCGCATTTGAGAACTCCGAGAATTGGGCAGTGTTGTCAACAG 480
consensus_7714#1      -----------------------------------------------------------G 1
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGG 540
consensus_7714#1      AAGGGGACAAGCCGATTCCTCGTTTTGATCATGCAGCAGCCATGGTAGGAAGCAAAATGG 61
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAG 600
consensus_7714#1      TGGTCTTTGGTGGAGATTCTGGCCATCATTTGCTGGATGATACAAAGATATTGAGCTTAG 121
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      ACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTC 660
consensus_7714#1      ACAAGCTTACATGGGATTCGGTGGCTCCCAAAATCCGTGTATCACAAGGTGGACATGCTC 181
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CAAAGTTTCGACCATGCAAAGGCCATAGCCTGGTATAATTCTTGAAGCTCATTGTTCTCT 720
consensus_7714#1      CAAAGTTTCGACCATGCAAAGGCCATAGCCTGGT-------------------------- 215
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CACTAGTCACTACTCATGTCCTTGCATTTATTTATAATCAGGATTATCAGTTGATGTATG 780
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      ACCTATTGTTCTGATTTTACTGGAATTGAATTCTCATAGCCTCCTTGTCAAAGTAGTAGA 840
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TGTAACTACGACACAAAGTACTTGCTTTTTGAAATTTTAGGTTCCATGGGGGAAGAATGT 900
consensus_7714#1      ------------------------------------------TCCATGGGGGAAGAATGT 233
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAA 960
consensus_7714#1      CATTCTTGTTGGAGGGAAAACTGATCCACCTTCTGACCGGATATCAGTCTGGTCCTTCAA 293
consensus_7714#2      ------------------GNCTTCTTCTCTTCCATAGCTGGTG-CAATTTATGTTCTTGG 41
                                          **  * * * * *  * * * *  ** * *      *   

consensus_7714#0      TACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAG 1020
consensus_7714#1      TACTGAAACTGATCTCTGGTCGTATATAGAAGTCAAGGGTGATATCCCGGTGGCTCGAAG 353
consensus_7714#2      CAGTGTGACCGCTCT-TGCTTGCTTGCTACTGCTGCTGCTCCGATCCAAGAAGAGAGAAG 100
                       * **  ** * *** ** * *  *      *     * *   ****  *  *   ****

consensus_7714#0      TGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAA 1080
consensus_7714#1      TGGCCATACAGTGATTAGAGCAGGTCCTGTTTTAATTCTCTTTGGAGGTGAGGATGGAAA 413
consensus_7714#2      AGATTGTGC--TAGTAGGGTTTAGTTTAGTCATTCCTGTTTTGGGTAAATTGGATTTGAA 158
                       *    * *  *  *  *     **   **  *   * * ** **      ****   **

consensus_7714#0      AGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCTTT 1140
consensus_7714#1      AGGGAAGAAACTACATGACCTTCATATGTTTGACCTGAAATCTTCAACATGGCTTCCCTT 473
consensus_7714#2      GAGGACGCAATGCCGAAG-----ATGAGTTGGNTTCTC--TCGTCGACGGATGAAGCTTN 211
                        *** * **   *         **  *** *        ** ** **        * * 

consensus_7714#0      GAATTATAAAGGTGCTGGACCTTCTCCAAGATCCAATCATGTGGCTGCTCTGTATGATGA 1200
consensus_7714#1      GAATTATAAAGGTGCTGGACCTTCTCCAAGATCCATTCATGTGGCTGCTCTGTATGATGA 533
consensus_7714#2      GAAGGTTTAAGGG----------------------------------------------- 224
                      ***   * ****                                                

consensus_7714#0      TAGAATTCTATTGATCTTTGGAGGCCAATCAAAATCCAAAACACTCAATGATGTTCATGC 1260
consensus_7714#1      TAGAATCCTATTGATCTTGGGAGGCCAATCAAAATCCAAAACCCTCAATGATGTTCATGC 593
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TCTAGACTTCGAAACGATGGTATGGTCGAGAGTGAAAACCCATGGCCATCATCCATCACC 1320
consensus_7714#1      TCTAN------------------------------------------------------- 598
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TCGAGCTGGTTGCTGCGGAGCTCTCTGTGGCACTAAATGGTATATCGCAGGGGGTGGAAG 1380
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CAAGAAAAAGCGTCATCCGGAAACTTGGGTTTTTGACATTCTGGAATCCAAGTGGTCTGT 1440
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TTGTGTAGTACCTCCTAGTTCCTCAATTACCACAAAGAAAGGATTCAGCATGGTTCCGTT 1500
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      GTACTACAGGGACAAGATTGTTCTTGTTGCTTTCGGAGGAAACAAAAAGGAACCATCTGA 1560
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TAAGGTCGAAGTACTAGTGGTACTGCAAAACGAGCACTGCTTCAGCTGGCGGTCTGCCCC 1620
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TGATGTAGAACCTTTACTGTATGAGGACTCACCTCCAAGCTCAAAGGAACTTTCTGATCA 1680
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CCTGAACAACAATTGTGCTCCTCTGTACTCTACTGGATCTGTAGCAAGGCATAGCCTTGC 1740
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CACCACTGTGGAGAGCTCGTCTGGGCGGAAATCGCTCCCTGATTCGCTGCTACAGCAACC 1800
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TAATCTTGGCAGTTCATCACTCCGCAGACAGTTCCGTCAGGAGGAGGAATGCAGCCTAGC 1860
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CCACAAACTGCAGAAACCAATTGATGATGACAGATACAAGGATGTTGATGACTGTTCCGA 1920
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      GCTACCCTCGGTCACAAATCAAAAGCAGCGCAATGATATATATCAGTCTCCAGATGCTGA 1980
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TGCTAAAGCGAAGAGGGTGGGCAGAAGTTCATCGGACATTAACCATCAGTATGACACCAA 2040
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AATAGCAAACCTGATCAGGAGGAACATGGCATTGGAAGAGCAACCTTCAGCGGCAATGGC 2100
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AAGCAAAGATGAAGCGGAGAAGAACCTCTCTTTGGTCATCGACAGCAAGGAGGAGCTAGA 2160
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      GAAGAGGTTGTCTGAGAAGGACAGGGAGGTCGAGACGCTGAAGGAGAAGGTGACAGGATT 2220
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AGAGCTGGCGCAAGAAGAATCAAACAGCCTCTCAAACACCGTCCATGCTGACAATGTGCG 2280
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CCTCGAACGCGAGGTGGCGTTCTTGAAGGCTGTCATGGATGAAACCCAGAAGGAGCTTCA 2340
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CTCTACTCGCGGAGTTTTAGCAGGAGAACGCTCGAGGGCCTTCCAGCTCCAGGTTGAAGT 2400
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      GTTCCATCTGAAGCAAAGGCTGCAAACAATGGAAGGAAGATCCCCAACACCAAGGAAACC 2460
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TCAGAATCTGTAGGGGTGCAGACTGCACAAGCCAAGTGTACAGTTGCCATGAGTTTGTTG 2520
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      TATCCTCTGTTGTAAATTAATTCCTGAGCCTATTTTTCCATGGAGACATGTTATGTAACC 2580
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      ATAAGTTTTGGTCCATCCATGAAGAATGTTTATGTGACAATACCTGAGCTCTGAGTTTGT 2640
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      AACTCAGCAGAAGATGTTAATTATTAAAGACCCAAAATGATACTCTCCATCTATGTTCAT 2700
consensus_7714#1      ------------------------------------------------------------
consensus_7714#2      ------------------------------------------------------------
                                                                                  

consensus_7714#0      CTACCAGTCTTGGAAGGAAATTAAATTCATTTTCGCAGGGTCC 2743
consensus_7714#1      -------------------------------------------
consensus_7714#2      -------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)