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Oryza sativa
cluster # 7733 cluster # 7733       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7733#0 length = 1902 sequences # 3  
consensus_7733#1 length = 693 sequences # 1  
consensus_7733#2 length = 500 sequences # 1  

consensusID : consensus_7733#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1902
fasta sequence
                              [TGGAATGCTTCTCCAGTTTCCCAAGGGAATGAACGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTTGACAAAGCAATTAACAAAGACAAGGAATCCTTGGGCAATGTGCCTGCATCTCCATCATTTAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAACGTTTAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTTGATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCCTGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGGCCAAAGAAACAATCCTGGTAGGCCCCCAAGGAAACCTGATGGCAGGGGTCTGCCTAGGAGACCTGATGAGAGGGGGCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAAGATTCTAGGAGAAATTGAACCCACTGTGCTGAGCATCAGAAAGATTTTCCGTGAATCAATTGATAGCATAAAACTTTCTCCGGAAGACGAAAAATTCATCAAAGAGAATGTTCTTGAACACCACCCTGAGAAACAATCAAAGGTGTCTGGTGAAATCGATCACATAATGGTTGACAAGCACCAAGTGTTCCAGGATAGTCGGTGCTTGTTTGTGGTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAATTTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGGCGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGTCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGCTTGTGCTCTAAACCTGCCACTCTTTTTTTCCTACTTGGCCTGACATTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTCTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCATCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTTATTTGGTTAGTCCAATGCAAGCCGATTCTGCGAGGCCGTGCCGAATCTGATGATTTTGTTGTTCTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTTTTGTAAAGACACTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCATCAAACATGAGGTCTTGCTGGTGACGCCACAAATTTGGTTTGATGTGTTTGCACTGAGCTGGACCAATCTGTTCTTGAAATTTCTTCAGGTTGGTACAGAAAATAGGTAATATTGTATTCTGTCATTTCATTACCAAGACCAGTGGTGTGAACAAGCTGGAGGCATTGCTTAAATGCATCCGTCAACCGTATGA]

[+] EMBL AK063373             [TGGAATGCTTCTCCAGTTTCCCAAGGGAATGAACGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTTGACAAAGCAATTAACAAAGACAAGGAATCCTTGGGCAATGTGCCTGCATCTCCATCATTTAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAACGTTTAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTTGATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCCTGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGGCCAAAGAAACAATCCTGGTAGGCCCCCAAGGAAACCTGATGGCAGGGGTCTGCCTAGGAGACCTGATGAGAGGGGGCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAAGATTCTAGGAGAAATTGAACCCACTGTGCTGAGCATCAGAAAGATTTTCCGTGAATCAATTGATAGCATAAAACTTTCTCCGGAAGACGAAAAATTCATCAAAGAGAATGTTCTTGAACACCACCCTGAGAAACAATCAAAGGTGTCTGGTGAAATCGATCACATAATGGTTGACAAGCACCAAGTGTTCCAGGATAGTCGGTGCTTGTTTGTGGTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAATTTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGGCGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGGCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGCTTGTGCTCTAATCCTGCCACTCTTTTTTTCCTACTTGGCCTGACATTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTCTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCATCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTTATTTGGTTAGTCCAATGCAAGCCGATTCTGCGAGGCCGTGCCGAATCTGATGATTTTGTTGTTCTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTTTTGTAAAGACACTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCATCAAACATGAGGTCTTGCTGGTGACGCCACAAATTTGGTTTGATGTGTTTGCACTGAGCTGGACCAATCTGTTCTTGAAATTTCTTCAGGTTGGTACAGAAAATAGGTAATATTGTATTCTGTCATTTCATTACCAAGACCAGTGGTGTGAACAAGCTGGAGGCATTGCTTAAATGCATCCGTCAACCGTATGA]
[-] EMBL CB633354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGGCCAAAGAAACAATCCTGGTAGGCCCCCAAGGAAACCTGATGGCAGGGGTCTGCCTAGGAGACCTGATGAGAGGGGGCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAAGATTCTAGGAGAAATTGAACCCACTGTGCTGAGCATCAGAAAGATTTTCCGTGAATCAATTGATAGCATAAAACTTTCTCCGGAAGACGAAAAATTCATCAAAGAGAATGTTCTTGAACACCACCCTGAGAAACAATCAAAGGTGTCTGGTGAAATCGATCACATAATGGTTGACAAGCACCAAGTGTTCCAGGATAGTCGGTGCTTGTTTGTGGTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAATTTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGGCGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGTCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGGGGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCATTATCAGGCTTGTGCTCTAAACCTGCCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI800930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tgAATCGATCACATAATG  TGACAA CACCAAGTGTTCCA GATAGTC GTGCTTGTTTGTGTTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAATTTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGGCGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGTCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGCTTGTGCTCTAAACCTGCCACTCTTTTTTTCCTACTTGGCCTGACTTTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTCTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCATCCCGTAGCTTAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_7733#0 TGGAATGCTTCTCCAGTTTCCCAAGGGAATGAACGTTCAGATGCAAAGCAATCTGATTCT TGGGATGGCTGGAAGTCTGCTGGAGTTGACAAAGCAATTAACAAAGACAAGGAATCCTTG GGCAATGTGCCTGCATCTCCATCATTTAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGG AATGAACGTTTAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTT GATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGT GCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGAT TCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCC TGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAA GGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCA GATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGGCCAAAGAAACAATCCTGGTAGGCCC CCAAGGAAACCTGATGGCAGGGGTCTGCCTAGGAGACCTGATGAGAGGGGGCCACCAAGG CGACACTTTGACCTAACAGCTGAGGAGGAAAAGATTCTAGGAGAAATTGAACCCACTGTG CTGAGCATCAGAAAGATTTTCCGTGAATCAATTGATAGCATAAAACTTTCTCCGGAAGAC GAAAAATTCATCAAAGAGAATGTTCTTGAACACCACCCTGAGAAACAATCAAAGGTGTCT GGTGAAATCGATCACATAATGGTTGACAAGCACCAAGTGTTCCAGGATAGTCGGTGCTTG TTTGTGGTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAAT TTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGG CGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGTCACTCCAGCTGGGGCT ACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATC GCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCA GACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAG AGCTGCCAACATCCTGCTTGTGCTCTAAACCTGCCACTCTTTTTTTCCTACTTGGCCTGA CATTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTT AGGTCTCACTCTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCATCCCGTA GCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTT ATTTGGTTAGTCCAATGCAAGCCGATTCTGCGAGGCCGTGCCGAATCTGATGATTTTGTT GTTCTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTT TTGTAAAGACACTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACA AGCAGGTGGCCTTGCATGAATTCATTCATCAAACATGAGGTCTTGCTGGTGACGCCACAA ATTTGGTTTGATGTGTTTGCACTGAGCTGGACCAATCTGTTCTTGAAATTTCTTCAGGTT GGTACAGAAAATAGGTAATATTGTATTCTGTCATTTCATTACCAAGACCAGTGGTGTGAA CAAGCTGGAGGCATTGCTTAAATGCATCCGTCAACCGTATGA



consensusID : consensus_7733#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 693
fasta sequence
                              [AGCAGCTGATGGAGGCACAGCACCAGGCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGCTTGTGCTCTAATCCTGCCACTCTTTTTTTCCTACTTGGCCTGACATTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTTTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCACCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTTATTTGGTTAGTCCAATGCAAGCCGATTTTGCGAGGCCGTGCCGAATTTGATGATTTTGTTGTTTTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTTTTGTAAAGACCCTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCCTCAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA761210             [AGCAGCTGATGGAGGCACAGCACCAGGCACTCCAGCTGGGGCTACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGCAACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGCTTGTGCTCTAATCCTGCCACTCTTTTTTTCCTACTTGGCCTGACATTGCCTAGTGACTAGACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTTTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCACCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTTATTTGGTTAGTCCAATGCAAGCCGATTTTGCGAGGCCGTGCCGAATTTGATGATTTTGTTGTTTTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTTTTGTAAAGACCCTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCCTCAAAAAAAAAAAAAAAAAAAAA]


>consensus_7733#1 AGCAGCTGATGGAGGCACAGCACCAGGCACTCCAGCTGGGGCTACACAGTCTACTGCAGT TGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATCGCAACCGCTCCAGCTGC AACTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGCAGACGATGGATTGCTCGG GAAGGGACCTAGCCCGTCTGACTGATGCTCAGGGTGCGCTTAGAGCTGCCAACATCCTGC TTGTGCTCTAATCCTGCCACTCTTTTTTTCCTACTTGGCCTGACATTGCCTAGTGACTAG ACAGATGGTGACTTTGTGTAGTAGAGAAGGGTTAGCAGTCTTTAGGTCTCACTTTTCCAG ACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCACCCCGTAGCTTAAACTCGTTTTTA CCCTCTCTTTTTTTTTATCTTTTTTGTCTTTCCAGTATGGTTATTTGGTTAGTCCAATGC AAGCCGATTTTGCGAGGCCGTGCCGAATTTGATGATTTTGTTGTTTTGCAAGGCACAGAG CTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTTACAGGGTTTTGTAAAGACCCTGAAAC TACCATGCGAATCAGCAAAAGATGGATTCCCTGCTGTGAACAAGCAGGTGGCCTTGCATG AATTCATTCCTCAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_7733#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 500
fasta sequence
                              [GGGATGGCTGGAAGTCTCCTGGAGTTGATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGTGCGTGGAATGCTGCTCCAAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCCTGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGCCCAAAGAAACAATCCTGGTAGGCCCCCCAAGGAAACCTGATGGCCAGGGTCTGCCTAGGAGACCTGATGAGAGGGGCCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAATCTTTCTGATGCTCAGCACA]

[-] EMBL BM422284             [GGGATGGCTGGAAGTCTCCTGGAGTTGATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGTGCGTGGAATGCTGCTCCAAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCCTGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGCCCAAAGAAACAATCCTGGTAGGCCCCCCAAGGAAACCTGATGGCCAGGGTCTGCCTAGGAGACCTGATGAGAGGGGCCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAATCTTTCTGATGCTCAGCACA]


>consensus_7733#2 GGGATGGCTGGAAGTCTCCTGGAGTTGATGATTCAGTTAAAGACAAGGAATCCTGGGGTA ATGTGCCTGCATCCCCATCAGATAGTGCGTGGAATGCTGCTCCAAGTTTCCCAAGGGAAT GAAAGTTCAGATGCAAAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGAT GCTTCAACTAACAAAGACAAGGAATCCTGGGGCAATGTGCCTGCATCTCCATCAGATAGT GCATGGAATGCTGCTCCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAAT GAGTCACGTAATAAGGACTGGAAATCAGATGGATGGGGTGCCAGAGGTGGCAATTGGAGG GCCCAAAGAAACAATCCTGGTAGGCCCCCCAAGGAAACCTGATGGCCAGGGTCTGCCTAG GAGACCTGATGAGAGGGGCCCACCAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAAA TCTTTCTGATGCTCAGCACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7733#0      TGGAATGCTTCTCCAGTTTCCCAAGGGAATGAACGTTCAGATGCAAAGCAATCTGATTCT 60
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TGGGATGGCTGGAAGTCTGCTGGAGTTGACAAAGCAATTAACAAAGACAAGGAATCCTTG 120
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GGCAATGTGCCTGCATCTCCATCATTTAGTGCGTGGAATGCTGCTCCAGTTTCCCAAGGG 180
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      AATGAACGTTTAGATGCAAAGCAATCTGATTCTTGGGATGGCTGGAAGTCTGCTGGAGTT 240
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GATGATTCAGTTAAAGACAAGGAATCCTGGGGTAATGTGCCTGCATCCCCATCAGATAGT 300
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GCGTGGAATGCTGCTCCAGTTTCCCAAGGGAATGAAAGTTCAGATGCAAAGCAATCTGAT 360
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAACAAAGACAAGGAATCC 420
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TGGGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAATGCTGCTCCAGTTTCCCAA 480
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCACGTAATAAGGACTGGAAATCA 540
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GATGGATGGGGTGCCAGAGGTGGCAATTGGAGGGGCCAAAGAAACAATCCTGGTAGGCCC 600
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      CCAAGGAAACCTGATGGCAGGGGTCTGCCTAGGAGACCTGATGAGAGGGGGCCACCAAGG 660
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      CGACACTTTGACCTAACAGCTGAGGAGGAAAAGATTCTAGGAGAAATTGAACCCACTGTG 720
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      CTGAGCATCAGAAAGATTTTCCGTGAATCAATTGATAGCATAAAACTTTCTCCGGAAGAC 780
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GAAAAATTCATCAAAGAGAATGTTCTTGAACACCACCCTGAGAAACAATCAAAGGTGTCT 840
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GGTGAAATCGATCACATAATGGTTGACAAGCACCAAGTGTTCCAGGATAGTCGGTGCTTG 900
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TTTGTGGTGTCTTCAGATGGAACTCGGTCAGATTTCTCCTATTTAAAATGCATGGAGAAT 960
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TTTGTGAGGAAGACCTACCCTGAGCATGGGGACTCATTCTGCAAGAAGTATTTCAAGAGG 1020
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      CGCCGTGACCAACCACCAGCAGCTGATGGAGGCACAGCACCAGTCACTCCAGCTGGGGCT 1080
consensus_7733#1      -----------------AGCAGCTGATGGAGGCACAGCACCAGGCACTCCAGCTGGGGCT 43
consensus_7733#2      ------------------------------GGGATGGCTGGAAGTCTCCTGGAGTTGATG 30
                                                    ** *  **   *      *  *    *   

consensus_7733#0      ACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATC 1140
consensus_7733#1      ACACAGTCTACTGCAGTTGATACCCAGGAGGGCACTTCACAGCAGACCCAACCAGATATC 103
consensus_7733#2      ATTCAGTTAAAGACAAGGAATCCT----GGGGTAATGTGCCTGCATCCCCATCAGATAGT 86
                      *  ****  *   **    ** *      *** * *   *      *** * ******  

consensus_7733#0      GCAACCGCTCCAGCTGCAA-CTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGC 1199
consensus_7733#1      GCAACCGCTCCAGCTGCAA-CTCAACAAGAGACTCTTCAAGACACTCCAGCTCCTCCAGC 162
consensus_7733#2      GCGTGGAATGCTGCTCCAAGTTTCCCAAGGGAAT------GAAAGTTCAGATGCA----- 135
                      **      * * *** ***  *   **** ** *      ** * * *** * *      

consensus_7733#0      AGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGA-CTGATGCTCAGGGTGCGCTT 1258
consensus_7733#1      AGACGATGGATTGCTCGGGAAGGGACCTAGCCCGTCTGA-CTGATGCTCAGGGTGCGCTT 221
consensus_7733#2      AAGCAATCTGATTCTTGGGATGGTTGGAAGTCTGCTGGAGTTGATGCTTCAACTAA---C 192
                      *  * **    * ** **** **     ** * *   **  *******     *      

consensus_7733#0      AGAGCTGCCAACATCCTGCTTGTGCTCTAAACCTGCCACTCTTTTTT-TCCTACTTGGCC 1317
consensus_7733#1      AGAGCTGCCAACATCCTGCTTGTGCTCTAATCCTGCCACTCTTTTTT-TCCTACTTGGCC 280
consensus_7733#2      AAAGACAAGGA-ATCCTG---GGGCAATGTGCCTGCATCTCCATCAGATAGTGCATGGAA 248
                      * **      * ******   * **  *   *****  ***  *    *  * * ***  

consensus_7733#0      TGACATTGCCTAGTGACTAGACAGATGGTGACT----TTGTGTAGTAGAGAAGGGTTAGC 1373
consensus_7733#1      TGACATTGCCTAGTGACTAGACAGATGGTGACT----TTGTGTAGTAGAGAAGGGTTAGC 336
consensus_7733#2      TGCTGCT-CCAGTTTCCCAAGGGGATGATGTCTGGAATTCTGCTGAAGCCAATGAGTCAC 307
                      **    * **   *  * *    **** ** **    ** **  * **  ** *  *  *

consensus_7733#0      AGTCTTTAGGTCTCACTCTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCA 1433
consensus_7733#1      AGTCTTTAGGTCTCACTTTTCCAGACGAACTCTGTAAATTCTGGATGTTAGTGAGCTGCA 396
consensus_7733#2      -GTAATAAGGACTGGAAAT--CAGATGGATGGGGTG--CCAGAGGTGGCAATTGGAGG-- 360
                       **  * *** **     *  **** * *    **        * **  * *  *  *  

consensus_7733#0      TCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTTTATCTTTTTTGTCTTTCCAG 1493
consensus_7733#1      CCCCGTAGCTTAAACTCGTTTTTACCCTCTCTTTTTTTTT-ATCTTTTTTGTCTTTCCAG 455
consensus_7733#2      GCCCAAAGAAACAATCCTGGTAGGCCCCCCAAGGAAACCTGATGGCCAGGGTCTGCCTAG 420
                       ***  **    **  *   *   *** *          * **       ****  * **

consensus_7733#0      TATGGTTATTTGGTTAGTCCAATGCAAGCCGATTCTGCGAGGCCGT-GCCGAATCTGATG 1552
consensus_7733#1      TATGGTTATTTGGTTAGTCCAATGCAAGCCGATTTTGCGAGGCCGT-GCCGAATTTGATG 514
consensus_7733#2      GAGACCTGATGAGAGGGGCCCAC-CAAGGCGACACTTTGACCTAACAGCTGAGGAGGAAA 479
                       *    *  *  *   * ** *  **** ***   *  **       ** **    **  

consensus_7733#0      ATTTTGTTGTTCTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTT 1612
consensus_7733#1      ATTTTGTTGTTTTGCAAGGCACAGAGCTCTCGCTGGTGCTGTTTCATTTTGGATGCTGTT 574
consensus_7733#2      ATCTTTCTGATGCTCAGCACA--------------------------------------- 500
                      ** **  ** *   **   **                                       

consensus_7733#0      ACAGGGTTTTGTAAAGACACTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGC 1672
consensus_7733#1      ACAGGGTTTTGTAAAGACCCTGAAACTACCATGCGAATCAGCAAAAGATGGATTCCCTGC 634
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCATCAAACATGAGGTCTTGCTGGTGA 1732
consensus_7733#1      TGTGAACAAGCAGGTGGCCTTGCATGAATTCATTCCTCAAAAAAAAAAAAAAAAAAAAA- 693
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      CGCCACAAATTTGGTTTGATGTGTTTGCACTGAGCTGGACCAATCTGTTCTTGAAATTTC 1792
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      TTCAGGTTGGTACAGAAAATAGGTAATATTGTATTCTGTCATTTCATTACCAAGACCAGT 1852
consensus_7733#1      ------------------------------------------------------------
consensus_7733#2      ------------------------------------------------------------
                                                                                  

consensus_7733#0      GGTGTGAACAAGCTGGAGGCATTGCTTAAATGCATCCGTCAACCGTATGA 1902
consensus_7733#1      --------------------------------------------------
consensus_7733#2      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)