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Oryza sativa
cluster # 7745 cluster # 7745       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7745#0 length = 1210 sequences # 5  

consensusID : consensus_7745#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1210
fasta sequence
                              [ACCCCTGGAAAACCCAGGTAATTACGAACTAGTCCTTCTCCAGCCCGGCGACGCGGGGGAATTTTACAGATAAGCCCTCGGATTCCTTCCCCCTATTCTCCGCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCTGAATTCAGATAATAGGCAGTTCTTGATGTGATCCATATGCCATGTTAAGCTTAGCAATTCTATTGGCATGTCCAATTACAAAA]

[+] EMBL AK103085             [ACCCCTGGAAAACCCAGGTAATTACGAACTAGTCCTTCTCCAGCCCGGCGACGCGGGGGAATTTTACAGATAAGCCCTCGGATTCCTTCCCCCTATTCTCCGCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCATGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGGGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGCTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCTGAATTCAGATAATAGGCAGTTCTTGATGTGATCCATATGCCATGTTAAGCTTAGCAATTCTATTGGCATGTCCAATTACAAAA]
[+] EMBL AK059874             [                                                                                                     GCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCT                                                                                   ]
[+] EMBL CF325048             [                                                                                                                                       AGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF325073             [                                                                                                                                       AGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCANGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF337799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAAaaaaaa                                                                                   ]


>consensus_7745#0 ACCCCTGGAAAACCCAGGTAATTACGAACTAGTCCTTCTCCAGCCCGGCGACGCGGGGGA ATTTTACAGATAAGCCCTCGGATTCCTTCCCCCTATTCTCCGCTCCTCGCGTCGTCGTCC TCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCAT TGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCT GAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCA TCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTT GACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCT TGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGG AATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGAC CAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCC TATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTT CTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGG CCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATC CAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAA CAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTC GAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAA TTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCT GGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCT TGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCTGAATTCAGATAAT AGGCAGTTCTTGATGTGATCCATATGCCATGTTAAGCTTAGCAATTCTATTGGCATGTCC AATTACAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)