These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7745#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1210 fasta sequence [ACCCCTGGAAAACCCAGGTAATTACGAACTAGTCCTTCTCCAGCCCGGCGACGCGGGGGAATTTTACAGATAAGCCCTCGGATTCCTTCCCCCTATTCTCCGCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCTGAATTCAGATAATAGGCAGTTCTTGATGTGATCCATATGCCATGTTAAGCTTAGCAATTCTATTGGCATGTCCAATTACAAAA] [+] EMBL AK103085 [ACCCCTGGAAAACCCAGGTAATTACGAACTAGTCCTTCTCCAGCCCGGCGACGCGGGGGAATTTTACAGATAAGCCCTCGGATTCCTTCCCCCTATTCTCCGCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCATGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGGGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGCTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCTGAATTCAGATAATAGGCAGTTCTTGATGTGATCCATATGCCATGTTAAGCTTAGCAATTCTATTGGCATGTCCAATTACAAAA] [+] EMBL AK059874 [ GCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAATGTTCT ] [+] EMBL CF325048 [ AGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTC ] [+] EMBL CF325073 [ AGAAGGCGAGAAGGGGCTCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATCTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCTTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTCAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTTTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACCTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCANGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATC ] [-] EMBL CF337799 [ CTATGGACTCACTCAGGCTTGTATTCCCCCCTACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTCACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATCACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGGATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTGACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTCTAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCGAATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTTGACATCCAAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||