These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 897 fasta sequence [CTTTCACCAGAAACTGAAAAGGAGAAACAACTATTCGCAGAGAGGGAAGCAAGGGACAAGCTGAGAAAAAGAAAGAGAGAAGAACAGAAGGGGGTGTTTGAAAATGGGATAAATAAGCTTCATGTTGAGGCTGAGCGACTAAATAGTTTACTAGCAGAGGGCCGTGTTTTCTCTGATTTGCCTGCTTTAGCTGATAGAGATAGCATCTTGCTGAAAGACACTCGCCTGGAGAACTCTCTTATCTGTCAGCC-TCAACAACGGAACTTGCATGGACGAATATTTGGAGGTTTCTTGATGCACCGAGCATTTGAGCTTGCCTTCTCAACTGCATATGCCTTTGTTGGGCAAAGACCTTGCTTTCTTGAAGTTGATCATGTTGACTTCTTAAAACCAGTGGATGTAGGAGACTTTCTTCGATTCAAGTCATGTGTCTTGTATACCCAGCTCGACAATGCAGAGCAGCCTCTGGTCAATGTTGAAGTTGTTGCTCATGTAACAAGGCCTGAGCTCCGGAAGAGCGAGGTTTCCAACACATTCCACTTCACCTTCACCGTCTGCAGCGATGCATTGAAGAACGGACTGAAGATACGCCATGTTGTTCCCTCTACTGAAGAAGAGGCACGGCGCATATTAGAGCGCATGGACGCAGAGGGTTTGTTCGACTAGTCCTGCAGAACCGCTTGTTTCAGCCACATGTC---TTTTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTAAATAACATCAGATAAGTAGTAGCATGCTGGCAATATAGCGGCAAAATGCTAGTTATATGATTACTTTTGCAATTCCTTTTGCAGACATTTGGGGGTATATAATAAACATAAACCTCGAGACTCAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK071305 [CTTTCACCAGAAACTGAAAAGGAGAAACAACTATTCGCAGAGAGGGAAGCAAGGGACAAGCTGAGAAAAAGAAAGAGAGAAGAACAGAAGGGGGTGTTTGAAAATGGGATAAATAAGCTTCATGTTGAGGCTGAGCGACTAAATAGTTTACTAGCAGAGGGCCGTGTTTTCTCTGATTTGCCTGCTTTAGCTGATAGAGATAGCATCTTGCTGAAAGACACTCGCCTGGAGAACTCTCTTATCTGTCAGCC TCAACAACGGAACTTGCATGGACGAATATTTGGAGGTTTCTTGATGCACCGAGCATTTGAGCTTGCCTTCTCAACTGCATATGCCTTTGTTGGGCAAAGACCTTGCTTTCTTGAAGTTGATCATGTTGACTTCTTAAAACCAGTGGATGTAGGAGACTTTCTTCGATTCAAGTCATGTGTCTTGTATACCCAGCTCGACAATGCAGAGCAGCCTCTGGTCAATGTTGAAGTTGTTGCTCATGTAACAAGGCCTGAGCTCCGGAAGAGCGAGGTTTCCAACACATTCCACTTCACCTTCACCGTCTGCAGCGATGCATTGAAGAACGGACTGAAGATACGCCATGTTGTTCCCTCTACTGAAGAAGAGGCACGGCGCATATTAGAGCGCATGGACGCAGAGGGTTTGTTCGACTAGTCCTGCAGAACCGCTTGTTTCAGCCACATGTC TTTTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTAAATAACATCAGATAAGTAGTAGCATGCTGGCAATATAGCGGCAAAATGCTAGTTATATGATTACTTTTGCAATTCCTTTTGCAGACATTTGGGGGTATATAATAAACATAAAC ] [+] EMBL AK101141 [CTTTCACCAGAAACTGAAAAGGAGAAACAACTATTCGCAGAGAGGGAAGCAAGGGACAAGCTGAGAAAAAGAAAGAGAGAAGAACAGAAGGGGGTGTTTGAAAATGGGATAAATAAGCTTCATGTTGAGGCTGAGCGACTAAATAGTTTACTAGCAGAGGGCCGTGTTTTCTCTGATTTGCCTGCTTTAGCTGATAGAGATAGCATCTTGCTGAAAGACACTCGCCTGGAGAACTCTCTTATCTGTCAGCC TCAACAACGGAACTTGCATGGACGAATATTTGGAGGTTTCTTGATGCACCGAGCATTTGAGCTTGCCTTCTCAACTGCATATGCCTTTGTTGGGCAAAGACCTTGCTTTCTTGAAGTTGATCATGTTGACTTCTTAAAACCAGTGGATGTAGGAGACTTTCTTCGATTCAAGTCATGTGTCTTGTATACCCAGCTCGACAATGCAGAGCAGCCTCTGGTCAATGTTGAAGTTGTTGCTCATGTAACAAGGCCTGAGCTCCGGAAGAGCGAGGTTTCCAACACATTCCACTTCACCTTCACCGTCTGCAGCGATGCATTGAAGAACGGACTGAAGATACGCCATGTTGTTCCCTCTACTGAAGAAGAGGCACGGCGCATATTAGAGCGCATGGACGCAGAGGGTTTGTTCGACTAGTCCTGCAGAACCGCTTGTTTCAGCCACATGTC TTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTAAATAACATCAGATAAGTAGTAGCATGCTGGCAATATAGCGGCAAAATGCTAGTTATATGATTACTTTTGCAATTCCTTTTGCAGACATTT GGGGTATATAATAAACATAAAC ] [-] EMBL CB620387 [ AGAAGACCAGAAGGGAGTGTTTGAAAATGGGATAAATAAGCTTCATGTTGAGGCTGAGCGACTAAATAGTTTACTAGCAGAGGGCCGTGTTTTCTCTGATTTGCCTGCTTTAGCTGATAGAGATAGCATCTTGCTGAAAGACACTCGCCTGGAGAACTCTCTTATCTGTCAGCC TCAACAACGGAACTTGCATGGACGAATATTTGGAGGTTTCTTGATGCACCGAGCATTTGAGCTTGCCTTCTCAACTGCATATGCCTTTGTTGGGCAAAGACCTTGCTTTCTTGAAGTTGATCATGTTGACTTCTTAAAACCAGTGGATGTAGGAGACTTTCTTCGATTCAAGTCATGTGTCTTGTATACCCAGCTCGACAATGCAGAGCAGCCTCTGGTCAATGTTGAAGTTGTTGCTCATGTAACAAGGCCTGAGCTCCGGAAGAGCGAGGTTTCCAACACATTCCACTTCACCTTCACCGTCTGCAGCGATGCATTGAAGAACGGACTGAAGATACGCCATGTTGTTCCCTCTACTGAAGAAGAGGCACGGCGCATATTAGAGCGCATGGACGCAGAGGGTTTGTTCGACTAGTCCTGCAGAACCGCTTGTTTCAGCCACATGTCATTTTTTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTAAATAACATCAGATAAGTAGTAGCATGCTGGCAATATAGCGGCAAAATGCTAGTTATATGAGGGCTTTTGCAATTCCTTTTGCA ] [+] EMBL AU091529 [ GCATCTTGCTGAAAGACACTCGNCTGGAGAACTCTCTTATCTGTCAGCCTTCAACAACGGAACTTGCATGGACGAATATTTGGAGGTTTCTTGATGCACCGAGCATTTGAGCTTGCCTTCTCAACTGCATATGCCTTTGTTGGGCAAAGACCTTGCTTTCTTGAAGTTGATCATGTTGACTTCTTAAAACCAGTGGATGTAGGAGACTTTCTTCGATTCAAGTCATGTGTCTTGTATACCCAGCTCGACAATGCAGAGCAGCCTCTGGTCAATGTTGAAGTTGTTGCTCATGTAACAAGGCCTGAGCTCCGGAAGAGCGAGGTTTCCAACACATTCCACTTCACCTTCACCGTCTGCAGCGATGCATTGAAGAACGGACTGAAGATACGCCATGTTGTTCCCTCTACTGAAGAAGAGGCACGGCGCATATTAGAGCGCATGGACGCAGAGGGTTTGTTCGACTAGTCCTGCAGAACCGCTTGTTTCAGCCACATGTC TTTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTAAATAACATCAGATAAGTAGTAGCATGCTGGCAATATAGCGGCAAAATGCTAGTTATATGATTACTTTTGCAATTCCTTTTGCAGACATTTGGGGGTATATAATAAACATAAACCTCGAGACTCAAAAA ] [+] EMBL AU173451 [ CANAGGGTTTGTTNGACTAGTCCTGCANAACCGCTTGTTTCAGCCNCATGT NTTTTTTTTTTACTGATCAACGTCAGCTAATGGGAAATGTAAAGATGATTTNAATAACATCAGATAAGTAGTAGCATGCTGGCAATATANCGGCAAAATGCTAGTTATATGATTACTTTTGCAATTCCTTTTGCAGACATTTGGGGGTATATAATAAACATAAACCTCGAGACTCNAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||