These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3690 fasta sequence [TGAATTCCCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCATGTCGTCGCGGCAGGACAAGGAGAAGTCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGGAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGATGGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTGATCTAGCTTCATTTTCTCACATCTACAGTCAATGTGCTGATAGCAGTGTGGTGTGTAAACAGAACAGCTTAAAATAGTAGTAATCGCTTTATTCATATTGGCTAAACAATTGTACAAAAACAAGTAAATAATTCAAATAGGAGGTGCCTAGTACATACCAAAATTATAATGGGTTTGAAGAGTACAAGCTGAAAATTTTTATTAACTCCTTAAAGCTTGTAATTGCATAGTGTGGCCTGCTATTAATATATCGTTTATTTTGTATTCCAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGGTTCGTAAAGTGCTTGTTGTGTATATTTGATATTTGTTCTTGTTTAAAATTGATCTTTTGCTTGGGTTTCAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT-GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT-GGTAGACTAAACTCTC-TTGGTGAC-GCCGCTCGT-GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGTTGAGC] [+] EMBL AK071334 [TGAATTCCCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCATGTCGTCGCGGCAGGACAAGGAGAAGTCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGGAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGATGGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTGATCTAGCTTCATTTTCTCACATCTACAGTCAATGTGCTGATAGCAGTGTGGTGTGTAAACAGAACAGCTTAAAATAGTAGTAATCGCTTTATTCATATTGGCTAAACAATTGTACAAAAACAAGTAAATAATTCAAATAGGAGGTGCCTAGTACATACCAAAATTATAATGGGTTTGAAGAGTACAAGCTGAAAATTTTTATTAACTCCTTAAAGCTTGTAATTGCATAGTGTGGCCTGCTATTAATATATCGTTTATTTTGTATTCCAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGGTTCGTAAAGTGCTTGTTGTGTATATTTGATATTTGTTCTTGTTTAAAATTGATCTTTTGCTTGGGTTTCAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT GGTAGACTAAACTCTC TTGGTGAC GCCGCTCGT GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGTTGAGC] [+] EMBL AK060581 [ TCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT GGTAGACTAAACTCTC TTGGTGAC GCCGCTCGT GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAAAGAAAGTGGGAAATGTTTGCAGGGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGT ] [+] EMBL CF324195 [ TAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTNGCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCA ] [+] EMBL C28299 [ tngnanTCATCGAAGCGAAGTGGCACATTTCACTCAAGTATT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATNAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTNGGTGGGTAGACTNAACTCTCTTTNGTGACGGCCGCTCCTGGGGAACAA ] [+] EMBL AA749674 [ TCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATCAAAATCCATTGGAAACGCAAC SAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAACTAGGTCATCAAATSCTGGCTTTTGGTGTCCTTTGGTTGTT TGGCTCAGTG CAGTGCCAGTCCAGCTTCTTGTTNNNGGTTGCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||