These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7818#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1521 fasta sequence [CGCTAATCCCCGTACGACGCCGGCGCAGCCCCGCACGCAGAAAGACGCGACGCGAGGAGCGGCCGCCGCCGGCAGCTGTTGCGATGAAGCGCTTCTTCCAGCCCGTGCCCAAGGATGGCTCCCCGGCGAAGAAGAGGCCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGACTCCGACTCCCTCGGCGGCGACGCCCCCGCCGCAGCCGCCTGCGCCGTCGGGGAGGGGGATTCTCCTCCCGCTCCCCGCGAGGAGGAACCGCGGAGGTTCGTGACGTGGAACGCCAACAGCCTGCTCCTCCGGATGAAGAGCGACTGGCCGGCCTTCTGCCAGTTCGTCTCCCGCGTCGACCCCGACGTCATCTGCGTCCAGGAAGTGCGGATGCCAGCAGCTGGTTCCAAAGGGGCACCAAAAAATCCTGGTCAACTGAAAGATGACACAAGCTCATCACGAGATGAAAAGCAGGTAGTGCTGCGTGCTTTGTCGAGTCCACCTTTTAAAGACTATCGTGTCTGGTGGTCTCTTTCAGACTCCAAATATGCAGGCACAGCTATGATTATAAAGAAGAAGTTTGAACCAAAGAAAGTGTCATTCAACTTGGATAGAACATCTTCCAAGCATGAACCAGATGGGCGTGTTATTATTGCAGAATTCGAATCGTTCCTCTTGCTGAACACTTATGCTCCAAACAATGGATGGAAAGAAGAGGAAAATTCATTTCAAAGAAGACGGAAATGGGATAAAAGAATGTTGGAGTTTGTTCAACAGGTAGACAAACCCTTAATCTGGTGTGGAGACTTGAATGTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGT-GGAGATTTTAGATTAGCTGAAGCATATCTGC-TTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGAATTGGATGATCTAGCTAGGATCCTGATTGTAATTATAATTAGTATGTTACTATGGTCTGCAATGCTATCTTTAGATCCTATAAGATCAAAAACTTCTACCATTTGTTCCATTGTTTTTAATCCGAAGAAAAACAATATATGCAAGCTAATTCTGGTAAAAAAAAAAAAA] [+] EMBL AK070295 [CGCTAATCCCCGTACGACGCCGGCGCAGCCCCGCACGCAGAAAGACGCGACGCGAGGAGCGGCCGCCGCCGGCAGCTGTTGCGATGAAGCGCTTCTTCCAGCCCGTGCCCAAGGATGGCTCCCCGGCGAAGAAGAGGCCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGACTCCGACTCCCTCGGCGGCGACGCCCCCGCCGCAGCCGCCTGCGCCGTCGGGGAGGGGGATTCTCCTCCCGCTCCCCGCGAGGAGGAACCGCGGAGGTTCGTGACGTGGAACGCCAACAGCCTGCTCCTCCGGATGAAGAGCGACTGGCCGGCCTTCTGCCAGTTCGTCTCCCGCGTCGACCCCGACGTCATCTGCGTCCAGGAAGTGCGGATGCCAGCAGCTGGTTCCAAAGGGGCACCAAAAAATCCTGGTCAACTGAAAGATGACACAAGCTCATCACGAGATGAAAAGCAGGTAGTGCTGCGTGCTTTGTCGAGTCCACCTTTTAAAGACTATCGTGTCTGGTGGTCTCTTTCAGACTCCAAATATGCAGGCACAGCTATGATTATAAAGAAGAAGTTTGAACCAAAGAAAGTGTCATTCAACTTGGATAGAACATCTTCCAAGCATGAACCAGATGGGCGTGTTATTATTGCAGAATTCGAATCGTTCCTCTTGCTGAACACTTATGCTCCAAACAATGGATGGAAAGAAGAGGAAAATTCATTTCAAAGAAGACGGAAATGGGATAAAAGAATGTTGGAGTTTGTTCAACAGGTAGACAAACCCTTAATCTGGTGTGGAGACTTGAATGTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGT GGAGATTTTAGATTAGCTGAAGCATATCTGCTTTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGAATTGGATGATCTAGCTAGGATCCTGATTGTAATTATAATTAGTATGTTACTATGGTCTGCAATGCTATCTTTAGATCCTATAAGATCAAAAACTTCTACCATTTGTTCCATTGTTTTTAATCCGAAGAAAAACAATATATGCAAGCTAAT ] [+] EMBL CA765936 [ TTCAACAGGTAGACAAACCCTTAATCTGGTGTGGAGACTTGAATGTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGT GGAGATTTTAGATTAGCTGAAGCATATCTGC TTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGAATTGGATGATCTAGCTAGGATCCTGATCGTAATTATAATTAGTATGGTACTATGGTCTGCAATGCTATCTTTAGATCCTATAAGATCAAAAACTTC ] [+] EMBL CF323579 [ CTTAATCTGGTGTGGAGACTTGAATGTCAGTCATGAAGAAATCGATGTTAGCCATCCTGATTTTTTTAGCAGTGCTAAACTCAATGGATACATCCCTCCAAATAAAGAGGATTGTGGACAGCCAGGATTCACCCTGTCAGAGAGGCGGCGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGTGGGAGATTNTAGATTAGCTGAAGCATATCTGCTTTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGA ] [-] EMBL CA759502 [ tgtgcGCAGGGCTACACTCCAGGGAGTCATCCCTCCAAATAAGAAGGATTGTGG CAACCAGGATTCACCCTGTCAGAAAGCGGGGGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGT GGAGATTTTAGATCAGCTGAAGCATATCTGC TTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGAATTGGATGATCTAGCTAGGATCCTGATTGTAATTATAATTAGTATGTTACTATGGTCTGCAATGCTATCTTTAGATCCTATAAGATCAAAAACTTCTACCATTTGTTCCATTGTTTTTAATCCGAAGAAAAACAATATATGCAAGCTAATTCTGGTAAAAAAAAAAAAA] [-] EMBL CA759503 [ tgtgcGCAGGGCTACACTCCAGGGAGTCATCCCTCCAAATAAGAAGGATTGTGG CAACCAGGATTCACCCTGTCAGAAAGCGGGGGCTTCGGCAATATATTGTCCCAAGGAAAGCTGGTAGATGCTTACAGATATCTGCACAAAGAGAAGGACATGGATTGTGGCTTTTCTTGGTCTGGACATCCAATTGGCAAGTACCGAGGGAAGAGAATGCGAATTGACTATTTCCTTGTTTCAGAAAAACTGAAGGACCAAATAGTTTCATGTGACATTCATGGTCGTGGAATAGAGCTAGAAGGATTTTATGGAAGTGATCACTGCCCCGTTTCACTTGAGCTCTCGGAAGAAGTAGAAGCACCAAAACCCAAGTCCTCCAACTAATTTCTATATTTCGCACTTAACCAGACATGGT GGAGATTTTAGATCAGCTGAAGCATATCTGC TTGTATCTCTTGAGTCATTATCCATTATTCAAATATTGTCTCAGTCTAGCAGTATTTCTGATGATGAATTGGATGATCTAGCTAGGATCCTGATTGTAATTATAATTAGTATGTTACTATGGTCTGCAATGCTATCTTTAGATCCTATAAGATCAAAAACTTCTACCATTTGTTCCATTGTTTTTAATCCGAAGAAAAACAATATATGCAAGCTAATTCTGGTAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||