These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7833#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1681 fasta sequence [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA] [+] EMBL AK073587 [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATAC ] [+] EMBL AK104985 [ CCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCT ] [+] EMBL CB648865 [ CCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGA ] [-] EMBL CB648866 [ CTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTGGTCATGAGTGATAAGCCATGAGGTGATCANTGTTGTATTGTGT ] [+] EMBL CA754236 [ TGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||