These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7885#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1665 fasta sequence [CATCACTCCTGCAATTCACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGGCGTTGACCGCAGCCGCCGGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCGCGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCTCTTCTACCTCGGCGACCTCCACGCCGCGGCCAGCCCCCGTCCCGACGCGGCCGGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCGCGTGTTCTGCCCGCCCACGAACACGGCGGCGGTGAAGCTCCCGGTCGTCGTCTACTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTGCCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCCCGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGCCAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTTCCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGCGTCCACCACCTCGCCGTCGTCGTCGCTCCGGCTCGCCGGCGCCGTGCTGATATCGCCCTTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCGCTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGGGACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTGGCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCATGGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAGTTCGTCCAGGAGCATAGCTCCAACCGTATGGCTTAATTATATTTGTTCTTTTTTTAAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATAATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAATCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGACAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATGTATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAATTATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAGCTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGAAGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTGGAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATTCGT] [+] EMBL AK109004 [CATCACTCCTGCAATTCACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGGCGTTGACCGCAGCCGCCGGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCGCGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCTCTTCTACCTCGGCGACCTCCACGCCGCGGCCAGCCCCCGTCCCGACGCGGCCGGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCGCGTGTTCTGCCCGCCCACGAACACGGCGGCGGTGAAGCTCCCGGTCGTCGTCTACTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTGCCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCCCGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGCCAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTTCCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGCGTCCACCACCTCGCCGTCGTCGTCGCTCCGGCTCGCCGGCGCCGTGCTGATATCGCCCTTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCGCTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGGGACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTGGCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCATGGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAGTTCGTCCAGGAGCATAGCTCCAACCGTATGGCTTAATTATATTTGTTCTTTTTTTAAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATAATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAATCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGACAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATGTATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAATTATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAGCTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGAAGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTGGAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATTCGT] consensusID : consensus_7885#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1229 fasta sequence [TTCCTCGAGCACTGTTGGCCTACTGGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTGATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT] [+] EMBL AK109437 [TTCCTCGAGCACTGTTGGCCTACTGGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTGATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT] [+] EMBL AK061012 [ GGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTG ] consensusID : consensus_7885#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1132 fasta sequence [TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCTCTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGCCACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCGCGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGGCGGCGCCGATGCCGGTGATGGTGTACTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTGCCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGGGAACGGCATCCCGGGCCTCGACGGCGACGTCGTCCCCGTCGACCTCGCCAGCTGCTTCCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGCCACGTGGCAGCCCACGGCCAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCGTACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTGGTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTCGACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCATGGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTGTTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGATCTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTTCTGTGATTCAAGGTGAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGTTGAAAACTGTA] [+] EMBL AK109637 [TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCTCTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGCCACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCGCGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGGCGGCGCCGATGCCGGTGATGGTGTACTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTGCCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGGGAACGGCATCCCGGGCCTCGACGGCGACGTCGTCCCCGTCGACCTCGCCAGCTGCTTCCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGCCACGTGGCAGCCCACGGCCAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCGTACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTGGTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTCGACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCATGGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTGTTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGATCTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTTCTGTGATTCAAGGTGAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGTTGAAAACTGTA] consensusID : consensus_7885#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1120 fasta sequence [CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGAAATGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATG] [-] EMBL AK111373 [CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGAAATGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7885#1 ----------------------------------TTCCTCGAGCACTGTTGGCCTACTG- 25 consensus_7885#3 CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGA 60 consensus_7885#0 -------------------------------------------CATCACTCCTGCAATT- 16 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ---GACTCGCACAGAAACCGGCGAAATGGG---GCACGAGAAGGAGCAAGAAACGGCCGG 79 consensus_7885#3 AATGACTCGCACAGAAACCGGCGAAATGGG---GCACGAGAAGGAGCAAGAAACGGCCGG 117 consensus_7885#0 ---CACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGG 73 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 CGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTT 139 consensus_7885#3 CGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTT 177 consensus_7885#0 CGTTGA-CCGCAGCCGCC--GGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCG 130 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 CGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCT 199 consensus_7885#3 CGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCT 237 consensus_7885#0 CGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCT 190 consensus_7885#2 -----TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCT 55 * ** ** * * * ** ****** * ** *** ** consensus_7885#1 CTTCTCC---CTCGCAGACCGCC------AGAGCGCCGCCGCGGCGCGCCCGGACGCCCA 250 consensus_7885#3 CTTCTCC---CTCGCAGACCGCC------AGAGCGCCGCCGCGGCGCGCCCGGACGCCCA 288 consensus_7885#0 CTTCTAC---CTCGGCGACCTCC------ACGCCGCGGCCAGCCCCCGTCCCGACGCGGC 241 consensus_7885#2 CTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGC 115 ** ** * **** ** * ** * *** * ** ***** consensus_7885#1 C------GGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCG 304 consensus_7885#3 C------GGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCG 342 consensus_7885#0 C------GGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCG 295 consensus_7885#2 CACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCG 175 * * ********** *** ***** ******* * ***** ** ******** consensus_7885#1 CGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTA 364 consensus_7885#3 CGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTA 402 consensus_7885#0 CGTGTTCTGCCCGCCCACGAACACGGCGGCGG------TGAAGCTCCCGGTCGTCGTCTA 349 consensus_7885#2 CGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGG---CGGCGCCGATGCCGGTGATGGTGTA 232 ******* ** * * ** * * * ** ** * ** ** consensus_7885#1 CTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTG 424 consensus_7885#3 CTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTG 462 consensus_7885#0 CTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTG 409 consensus_7885#2 CTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTG 292 ** ************ **** *** ** * * ** * * ***** * ** consensus_7885#1 CCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCC 484 consensus_7885#3 CCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCC 522 consensus_7885#0 CCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCC 469 consensus_7885#2 CCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCC 352 **** * * * * *** * * * *** ** ** ***** ************** ** consensus_7885#1 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCAC 544 consensus_7885#3 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCAC 582 consensus_7885#0 CGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGC 529 consensus_7885#2 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGG 412 *********** ********************** * * ** ******* ***** * consensus_7885#1 CGTCGGCCTCCCCG---CCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTT 601 consensus_7885#3 CGTCGGCCTCCCCG---CCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTT 639 consensus_7885#0 CAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTT 589 consensus_7885#2 GAACGGCATCCCGGGCCTCGACGGCGA---CGTCGTCCCCGTCGACCTCGCCAGCTGCTT 469 **** ** * * ** ** * * ** * *********** ** ******* consensus_7885#1 CCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGC 661 consensus_7885#3 CCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGC 699 consensus_7885#0 CCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGC 649 consensus_7885#2 CCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGC 529 ***** *** ** ***** ***** ******* ***** ** ** * ** ***** ** consensus_7885#1 CGC-CACCACCTCCTCGA-GCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCG 719 consensus_7885#3 CGC-CACCACCTCCTCGA-GCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCG 757 consensus_7885#0 GTC-CACCACCTCGCCGTCGTCGTCGC-TCCGGCTCGCCGGCGCCGTGCTGATATCGCCC 707 consensus_7885#2 CACGTGGCAGCCCACGGC--CAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCG 587 * ** * * * * **** ***** ** * * * *** consensus_7885#1 TTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTG 779 consensus_7885#3 TTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTG 817 consensus_7885#0 TTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCG 767 consensus_7885#2 TACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTG 647 * **************** ***** *** ** *** *** * * * * consensus_7885#1 GTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGC 839 consensus_7885#3 GTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGC 877 consensus_7885#0 CTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGG 827 consensus_7885#2 GTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGC 707 ** * * * ****** * *** * *********** ******* *** consensus_7885#1 GACCACCCGGCGGCGCACGT---CACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCG 896 consensus_7885#3 GACCACCCGGCGGCGCACGT---CACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCG 934 consensus_7885#0 GACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCG 887 consensus_7885#2 GACCACCCGGCGGCGCACGT---CACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCG 764 ****** ********* *** * ** **** ** ************** ******* consensus_7885#1 CCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCC 956 consensus_7885#3 CCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCC 994 consensus_7885#0 CCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTG 947 consensus_7885#2 CCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTC 824 *************** **** **** **** *** *** ****** * ****** consensus_7885#1 GGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCAC 1016 consensus_7885#3 GGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCAC 1054 consensus_7885#0 GCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCAT 1007 consensus_7885#2 GACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCAT 884 * ****** *** ************ ***** ***** *** * ** **** consensus_7885#1 TCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCG 1076 consensus_7885#3 TCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCG 1114 consensus_7885#0 GGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAG 1067 consensus_7885#2 GGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTG 944 **** *** ****************** ***** ** ** * **** ** *** * consensus_7885#1 TTCATGGAGCGCAACGCGCCGCCCAAATCGAATG-CTTAATT-AGAAGCGTTTTATTTAC 1134 consensus_7885#3 TTCATG------------------------------------------------------ 1120 consensus_7885#0 TTCGTCCAG----GAGCATAGCTCCAACCGTATGGCTTAATT-ATATTTGTTCTTTTTTT 1122 consensus_7885#2 TTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGAT 1004 *** * consensus_7885#1 CTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTG 1194 consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 AAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATA 1182 consensus_7885#2 CTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTT 1064 consensus_7885#1 ATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT------------------------- 1229 consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 ATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAA 1242 consensus_7885#2 CTGTGATTCAAGGT---GAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGT 1121 consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 TCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGA 1302 consensus_7885#2 TGAAAACTGTA------------------------------------------------- 1132 consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 CAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATG 1362 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 TATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAAT 1422 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 TATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAG 1482 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 CTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGA 1542 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 AGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTG 1602 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 ------------------------------------------------------------ consensus_7885#3 ------------------------------------------------------------ consensus_7885#0 GAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATT 1662 consensus_7885#2 ------------------------------------------------------------ consensus_7885#1 --- consensus_7885#3 --- consensus_7885#0 CGT 1665 consensus_7885#2 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||