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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7909#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2405 fasta sequence
[GAGACGGCCGCATTGGATGCCCATTCTCTCTCTGTCCAAAGAAACTCCATTCTTCCAGCCAAAAAGAGAGAGAAAAAGTGGGAAAGAAAGAGAAAAGGTTTGGTTTTTGGAGGACCTCTTGGTCTCTCCTCGTCGCTGGGGTTCTTTGTTCTTGTAGTGGTAGTAGCCACTTGCTTGAGTAAAGAAAAAGAGAAAAAAAAAGCATGGTTCTTGCGGCATCATCCTCTTGGTAGCCCTCGTTTAGGCGGCGTTGCTGTCTGTCTGTCTGTGAGAGTGAGGCTTAATCCGTCCAGAAATGAGGAAGCATGGGTGGCAGCTGCCTTACCATCCTCTCCAGGTGGTGGCGATAGCGGTGTTCTTGGCATTGGGATTTGCCTTCTACGTCTTCTTCGTGCCGTTCGTGGGGAGGAAGGCGTTCCAGTATGTAGCTATGGTTCTCTACACTCCCCTGATTACATCTGTTGTCGTGTTATACATTTGGTGTGCTGCTACAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATTGAAGGATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGTTAAGTCAAGGAGGAAAGATGTCAAGTGATGGTTTTAATGCTGTAGATAACAGCGAGAAATTGAGCAGCATGCTTGAGCAAAATGATTCACATTCCTGGCCCACATTTTCTGAAATACTTTGTTTCCCCTTTTCCTGCCTTTGCAAAAGATGCTTCCATGCGGATAATCAGTCATCTGAACAGCACATGAGTGAAGAAGGAATGTTCTTCTGCAGCTTGTGTGAAGCAGAGGTCCTGAAGAACAGTAAGCATTGCAGAGTATGTGACAAGTGTGTTGATGGCTTTGATCACCATTGCAGATGGCTCAACAATTGCATAGGGAAAAGGAACTACAAAGGTTTCTTCCTTCTAATGACTTCTGCTGTACTCCTTCTTGTAATGCAGTGGCTGTCAGGAGCCCTTGTGCTGATTCTCTGCATTGTGGATCGAGGGGAGTTCTCCAGACAGATTGTCTCCAAGTTAGGAAGTAGCTTCTCAACTGTAGTGTTTATAATTGTTGTGGCCACCTGTACCGTACTAGCAATGATTGCAACTATACCACTTGCTCAGCTTTTGTGTTTCCATATTCTTCTTATCAAGAAGGGAATTAGTACGTATGATTACATCATAGCTTTAAGAGAGCAAGAGGAGGATCAACAAGAAGAGACTGCTGGGCACCAAAGTCCGCAGATGTCTATTATTAGCTCTGTTACTGGATTTAGCACTGCAAGTTCTTTTGGTCCACTTCATCGTGGTTCATGGTGCACTCCACCACGATTGTTCCTTGAAGATCAGTTTGATGTCATCCCTCCAGAGATTGGCATGCTGCAGAACTCTGGGAGTAAGAAAACAAAGGAAGATGAAGGAGCAAGGCGAAGAACTGGGACAGTAAAAATCAGTCCTTGGACACTGGCACGCCTTAATGCAGAGGAAGTGTCAAGGGCAGCTGCACAGGCAAAGAAGAAATCCAAAATTCTGAAGCCAATTGCAAGACACGATGTTCCAATCGGCCATGACATAAACATTGGTGGTAAACTAGTTCCCAAGGCTGACAACAACAGAAGACCTGATAAAAGGGGACGATTCCCAGCCGAACTTTCCCTCGACCCCCTTACAAGACTATCTGCAAGTGGTACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAATCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACCGAGTGCTGCGGCATCCACAAGAAATGCCGCCTCATCCCCAGAAAGCAGCTTCGACTCGCCTGATCTTCACCCGTTCCGCCTTTCCTCGTGCACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAGAGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGACAGCGATCGCATCCCGTCGAGAATTGTTCACAGATCGTCGAACTGGGCCAACGCCATCTTGAGCTCAGGTCAGGGAGGAGGCCCTGCAGCTGATCCCAACATGCCATCATCTGAAGGGTAACTCTACCACCGGCCAGAAGGTCGAGCTAGTCAGATATGACTTGATTCCAGGCCATATGAGCTGCATGGTGCTGGCTCCTGGAGAATGCAGTATACAGCAGAGCAATGATGTTGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCAAGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGCTGTCAGGCATTCTCTTGTGTCCCAGCAAATGTGAACCTGAGATTCGTTGCGCTCATTTGAGATCAGTACAGCATTCTGTCCG]
[+] EMBL AK121902 [GAGACGGCCGCATTGGATGCCCATTCTCTCTCTGTCCAAAGAAACTCCATTCTTCCAGCCAAAAAGAGAGAGAAAAAGTGGGAAAGAAAGAGAAAAGGTTTGGTTTTTGGAGGACCTCTTGGTCTCTCCTCGTCGCTGGGGTTCTTTGTTCTTGTAGTGGTAGTAGCCACTTGCTTGAGTAAAGAAAAAGAGAAAAAAAAAGCATGGTTCTTGCGGCATCATCCTCTTGGTAGCCCTCGTTTAGGCGGCGTTGCTGTCTGTCTGTCTGTGAGAGTGAGGCTTAATCCGTCCAGAAATGAGGAAGCATGGGTGGCAGCTGCCTTACCATCCTCTCCAGGTGGTGGCGATAGCGGTGTTCTTGGCATTGGGATTTGCCTTCTACGTCTTCTTCGTGCCGTTCGTGGGGAGGAAGGCGTTCCAGTATGTAGCTATGGTTCTCTACACTCCCCTGATTACATCTGTTGTCGTGTTATACATTTGGTGTGCTGCTACAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATTGAAGGATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGTTAAGTCAAGGAGGAAAGATGTCAAGTGATGGTTTTAATGCTGTAGATAACAGCGAGAAATTGAGCAGCATGCTTGAGCAAAATGATTCACATTCCTGGCCCACATTTTCTGAAATACTTTGTTTCCCCTTTTCCTGCCTTTGCAAAAGATGCTTCCATGCGGATAATCAGTCATCTGAACAGCACATGAGTGAAGAAGGAATGTTCTTCTGCAGCTTGTGTGAAGCAGAGGTCCTGAAGAACAGTAAGCATTGCAGAGTATGTGACAAGTGTGTTGATGGCTTTGATCACCATTGCAGATGGCTCAACAATTGCATAGGGAAAAGGAACTACAAAGGTTTCTTCCTTCTAATGACTTCTGCTGTACTCCTTCTTGTAATGCAGTGGCTGTCAGGAGCCCTTGTGCTGATTCTCTGCATTGTGGATCGAGGGGAGTTCTCCAGACAGATTGTCTCCAAGTTAGGAAGTAGCTTCTCAACTGTAGTGTTTATAATTGTTGTGGCCACCTGTACCGTACTAGCAATGATTGCAACTATACCACTTGCTCAGCTTTTGTGTTTCCATATTCTTCTTATCAAGAAGGGAATTAGTACGTATGATTACATCATAGCTTTAAGAGAGCAAGAGGAGGATCAACAAGAAGAGACTGCTGGGCACCAAAGTCCGCAGATGTCTATTATTAGCTCTGTTACTGGATTTAGCACTGCAAGTTCTTTTGGTCCACTTCATCGTGGTTCATGGTGCACTCCACCACGATTGTTCCTTGAAGATCAGTTTGATGTCATCCCTCCAGAGATTGGCATGCTGCAGAACTCTGGGAGTAAGAAAACAAAGGAAGATGAAGGAGCAAGGCGAAGAACTGGGACAGTAAAAATCAGTCCTTGGACACTGGCACGCCTTAATGCAGAGGAAGTGTCAAGGGCAGCTGCACAGGCAAAGAAGAAATCCAAAATTCTGAAGCCAATTGCAAGACACGATGTTCCAATCGGCCATGACATAAACATTGGTGGTAAACTAGTTCCCAAGGCTGACAACAACAGAAGACCTGATAAAAGGGGACGATTCCCAGCCGAACTTTCCCTCGACCCCCTTACAAGACTATCTGCAAGTGGTACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAATCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACCGAGTGCTGCGGCATCCACAAGAAATGCCGCCTCATCCCCAGAAAGCAGCTTCGACTCGCCTGATCTTCACCCGTTCCGCCTTTCCTCGTGCACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAGAGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGACAGCGATCGCATCCCGTCGAGAATTGTTCACAGATCGTCGAACTGGGCCAACGCCATCTTGAGCTCAGGTCAGGGAGGAGGCCCTGCAGCTGATCCCAACATGCCATCATCTGAAGGGTAACTCTACCACCGGCCAGAAGGTCGAGCTAGTCAGATATGACTTGATTCCAGGCCATATGAGCTGCATGGTGCTGGCTCCTGGAGAATGCAGTATACAGCAGAGCAATGATGTTGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCAAGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGCTGTCAGGCATTCTCTTGTGTCCCAGCAAATGTGAACCTGAGATTCGTTGCGCTCATTTGAGATCAGTACAGCATTCTGTCCG]
[+] EMBL AU164915 [ TTTTGGAGGACCTCTTGGTCTCTCCTCGTCGCTGGGGTTCTTTGTTCTTGTAGTGGTAGTAGCCACTTGCTTGAGTAAAGAAAAAGAGAAAAAAAAAGCATGGTTCTTGCGGCATCATCCTCTTGGTAGCCCTCGTTTAGGCGGCGTTGCTGTCTGTCTGTCTGTGAGAGTGAGGCTTAATCCGTCCAGAAATGAGGAAGCATGGGTGGCAGCTGCCTTACCATCCTCTCCAGGTGGTGGCGATA CGGTGTTCTTGGCATTGGGATTTGCCTTCTACGTCTTCTTCGTGCCGTTCGTGGGGAGGAAGGCGTTCCAGTATGTAGCTATGGTTCTCTACACTCCCCTG ]
consensusID : consensus_7909#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1362 fasta sequence
[GCCGGCACGCGCCGCCTCCGCCTTGCCCTCGCGCCGCCGCGTCCACCGCGGCCACGGCCGCCGCGTCCACCTCCGCCGCTGTCGCGTCGCCGTCAGCGAGGCGAGCCGCCATCTCCGCCTTAGCCACCGCCGTCGTCGAGCGCCGCCGCTGCCAACCGCCACTTCCGGCCGCCGGCGTCCCGATCCGGCCGCCTTCCCCTCGCAGCACGCCGTCGCCGTCACCGAGCGCGCCGCCTCCGCCTCACGTCGGTGCTGCCGACCGCCGGGTCCGGCTGCCTTCGACGGTCGACGTCTGGATCCGGCCTCCGTGTTGTCGGGGCATGCGGATCTGACCGCCCGCGACCCCTCCTCGCCTCACCCTCTCACTCTCCCTCTCCCTCTTCCTCTGACCGCCCCCGTCCGGATCCCACTTCGCTGCCGCTCTCCCCGCGACGAGCATAGGCACGGCTGCATCTTTCCGGCGGCGGCGACATCTTCTCGACGACGACAGCGTCTTCTCGGCGTAGGCAGCGTGGTTCATAGGAGAGCCATGGCTTTTGGAGATGAAGTTGCACAACAGTTGTGGGCGGGGAAGACCTGTGTCCTCGTGGGTGGAGCTGTCGAGAGAAATTTCACTATTGTGACCAGCAGTAGTTTCAGCGCTTGGAGGATTCAATCTTCACTGTCGGTACAATCATTTGTTGGGAAATAACTTGTCGGATGATATTCCTTTCCACCTGCCATTTTACTCCTCAGATTACATCTGTTGTCGTGTTATGCATTTGGTGTGTTGCTGCAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATTGAACAAGGATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGTTAAGTCAAGGAGGAAAAATGTCAAGTGATGGATTTAATGCTGTTTATAACAGCGAGAAATTGAGCAACATGCTTGAGCTAAAAGATTCACATTCCTAGCCCACATTTTCTGAAATACTTTGTTTCCCCTTTTCCTGCCTTTGCAAAAGATGCTTCCATGCGGATCATCAGTCATCTGAACAGCACATGAGTGAAGAAGGAATGTTCTTCTTCAGCTTGTGTGCGAAGCAGAGGTATGATCAACTGATGTTCAGAAATTTTAATTTTCTAAGGTTATTGGGGTTATTGGCCACAAGCTCCATTTGTTGCACTGGTCTCTTTTAATGATGTGTCAGTACTTTAGATTATAGTGTGACATGTGCTGGTAAATATAAGCCAGTAGGAGTATCAGAATAATCAATGTAATTTAGAAACAACTATGGTTAACTAGATTGCATTCATACAAGAATCATGATTGTTATTAGTATCAAATATTCATGTAATTCCAAATTATAA]
[+] EMBL AK106391 [GCCGGCACGCGCCGCCTCCGCCTTGCCCTCGCGCCGCCGCGTCCACCGCGGCCACGGCCGCCGCGTCCACCTCCGCCGCTGTCGCGTCGCCGTCAGCGAGGCGAGCCGCCATCTCCGCCTTAGCCACCGCCGTCGTCGAGCGCCGCCGCTGCCAACCGCCACTTCCGGCCGCCGGCGTCCCGATCCGGCCGCCTTCCCCTCGCAGCACGCCGTCGCCGTCACCGAGCGCGCCGCCTCCGCCTCACGTCGGTGCTGCCGACCGCCGGGTCCGGCTGCCTTCGACGGTCGACGTCTGGATCCGGCCTCCGTGTTGTCGGGGCATGCGGATCTGACCGCCCGCGACCCCTCCTCGCCTCACCCTCTCACTCTCCCTCTCCCTCTTCCTCTGACCGCCCCCGTCCGGATCCCACTTCGCTGCCGCTCTCCCCGCGACGAGCATAGGCACGGCTGCATCTTTCCGGCGGCGGCGACATCTTCTCGACGACGACAGCGTCTTCTCGGCGTAGGCAGCGTGGTTCATAGGAGAGCCATGGCTTTTGGAGATGAAGTTGCACAACAGTTGTGGGCGGGGAAGACCTGTGTCCTCGTGGGTGGAGCTGTCGAGAGAAATTTCACTATTGTGACCAGCAGTAGTTTCAGCGCTTGGAGGATTCAATCTTCACTGTCGGTACAATCATTTGTTGGGAAATAACTTGTCGGATGATATTCCTTTCCACCTGCCATTTTACTCCTCAGATTACATCTGTTGTCGTGTTATGCATTTGGTGTGTTGCTGCAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATTGAACAAGGATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGTTAAGTCAAGGAGGAAAAATGTCAAGTGATGGATTTAATGCTGTTTATAACAGCGAGAAATTGAGCAACATGCTTGAGCTAAAAGATTCACATTCCTAGCCCACATTTTCTGAAATACTTTGTTTCCCCTTTTCCTGCCTTTGCAAAAGATGCTTCCATGCGGATCATCAGTCATCTGAACAGCACATGAGTGAAGAAGGAATGTTCTTCTTCAGCTTGTGTGCGAAGCAGAGGTATGATCAACTGATGTTCAGAAATTTTAATTTTCTAAGGTTATTGGGGTTATTGGCCACAAGCTCCATTTGTTGCACTGGTCTCTTTTAATGATGTGTCAGTACTTTAGATTATAGTGTGACATGTGCTGGTAAATATAAGCCAGTAGGAGTATCAGAATAATCAATGTAATTTAGAAACAACTATGGTTAACTAGATTGCATTCATACAAGAATCATGATTGTTATTAGTATCAAATATTCATGTAATTCCAAATTATAA]
consensusID : consensus_7909#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 868 fasta sequence
[ACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAATCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACTGAGTGCTGCGGCATCCACAAGAAATGCCGCCTCATCCCCAGAAAGCAGCTTCGACTCGCCTGATCTGCACCCGTTCCGCCTTTCCTCGTGCACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAGAGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGACAGCGATCGCATCCCGTCGAGAATTGTTCACAGATCGTCGAACTGGGCCAACGCCATCTTGAGCTCAGGTCAGGGAGGAGGCCCTGCAGCTGATCCCAACATGCCATCATCTGAAGGGTAACTCTACCACCGGCCAGAAGGTCGAGCTAGTCAGATATGACTTGATTCCAGGCCATATGAGCTGCATGGTGCTGGCTCCTGGAGAATGCAGTATACAGCAGAGCAATGATGTTGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCAAGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGCTGTCAGGCATTCTCTTGTGTCCCCAGCAATGTGAACCTGAGATTCGTTGCGCTCATTTGAGATCAGTTTAAAAAAAAAAAAAACCTCAGGGGGGGGGCCCNGNCCCCATTTCCCCCTATAGTGAGTTCGATTTACCGCCGCTCACTGGCCGGCGTGTTACAACGTCCGGACTGGGGAAAACCCGTGCGTTCCCCAACTTATCCCCTTGCACACATCCCCCTTTTCCCACCTTGGCTTA]
[+] EMBL CA756955 [ACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAATCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACTGAGTGCTGCGGCATCCACAAGAAATGCCGCCTCATCCCCAGAAAGCAGCTTCGACTCGCCTGATCTGCACCCGTTCCGCCTTTCCTCGTGCACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAGAGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGACAGCGATCGCATCCCGTCGAGAATTGTTCACAGATCGTCGAACTGGGCCAACGCCATCTTGAGCTCAGGTCAGGGAGGAGGCCCTGCAGCTGATCCCAACATGCCATCATCTGAAGGGTAACTCTACCACCGGCCAGAAGGTCGAGCTAGTCAGATATGACTTGATTCCAGGCCATATGAGCTGCATGGTGCTGGCTCCTGGAGAATGCAGTATACAGCAGAGCAATGATGTTGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCAAGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGCTGTCAGGCATTCTCTTGTGTCCCCAGCAATGTGAACCTGAGATTCGTTGCGCTCATTTGAGATCAGTTTAAAAAAAAAAAAAACCTCAGGGGGGGGGCCCNGNCCCCATTTCCCCCTATAGTGAGTTCGATTTACCGCCGCTCACTGGCCGGCGTGTTACAACGTCCGGACTGGGGAAAACCCGTGCGTTCCCCAACTTATCCCCTTGCACACATCCCCCTTTTCCCACCTTGGCTTA]
consensusID : consensus_7909#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence
[TCGTNCCGTTCGTGGGGAGGAANCCGTTCCAGTATGTAGCTATGGTTCTCTACACNCCCCCTGGTGAGGGTTACTCTCCTTCGCGAGGCGATTGGATTAGCTAGCAAGAACAGATCTAGCNCCCTTCCTTTTCTTTTCACTTGTTGCCATCTCATTGNGGATTGAGACAGTGCACATTANCCATTCCGCTGTCTGTAGATAAGAGAAATGTAAGATGTTTTGCGTGTTCGCAGATATGTATTGTAAAACAATGATGTGAGGGAGATTTAGAGAAGGATGTACAAGAAGTATTTCTGCNCCTAGTGATAGTGATACCCATTTTTGAAGTGTATGCCAGCTTAATATGTTTTGATAGCATTGTTGTCGAAGCAAGTTGAGAGGTTAAATCTTGACGGTGTGTAAAGTGTCGNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU031517 [TCGTNCCGTTCGTGGGGAGGAANCCGTTCCAGTATGTAGCTATGGTTCTCTACACNCCCCCTGGTGAGGGTTACTCTCCTTCGCGAGGCGATTGGATTAGCTAGCAAGAACAGATCTAGCNCCCTTCCTTTTCTTTTCACTTGTTGCCATCTCATTGNGGATTGAGACAGTGCACATTANCCATTCCGCTGTCTGTAGATAAGAGAAATGTAAGATGTTTTGCGTGTTCGCAGATATGTATTGTAAAACAATGATGTGAGGGAGATTTAGAGAAGGATGTACAAGAAGTATTTCTGCNCCTAGTGATAGTGATACCCATTTTTGAAGTGTATGCCAGCTTAATATGTTTTGATAGCATTGTTGTCGAAGCAAGTTGAGAGGTTAAATCTTGACGGTGTGTAAAGTGTCGNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7909#0 GAGACGGCCGCATTGGATGCCCATTCTCTCTCTGTCCAAAGAAACTCCATTCTTCCAGCC 60
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AAAAAGAGAGAGAAAAAGTGGGAAAGAAAGAGAAAAGGTTTGGTTTTTGGAGGACCTCTT 120
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GGTCTCTCCTCGTCGCTGGGGTTCTTTGTTCTTGTAGTGGTAGTAGCCACTTGCTTGAGT 180
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AAAGAAAAAGAGAAAAAAAAAGCATGGTTCTTGCGGCATCATCCTCTTGGTAGCCCTCGT 240
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 TTAGGCGGCGTTGCTGTCTGTCTGTCTGTGAGAGTGAGGCTTAATCCGTCCAGAAATGAG 300
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GAAGCATGGGTGGCAGCTGCCTTACCATCCTCTCCAGGTGGTGGCGATAGCGGTGTTCTT 360
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GGCATTGGGATTTGCCTTCTACGTCTTCTTCGTGCCGTTCGTGGGGAGGAAGGCGTTCCA 420
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GTATGTAGCTATGGTTCTCTACACTCCCCTGATTACATCTGTTGTCGTGTTATACATTTG 480
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GTGTGCTGCTACAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATT 540
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GAAGGATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGTTAAGTCAAGGAGGAAAGAT 600
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GTCAAGTGATGGTTTTAATGCTGTAGATAACAGCGAGAAATTGAGCAGCATGCTTGAGCA 660
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AAATGATTCACATTCCTGGCCCACATTTTCTGAAATACTTTGTTTCCCCTTTTCCTGCCT 720
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 TTGCAAAAGATGCTTCCATGCGGATAATCAGTCATCTGAACAGCACATGAGTGAAGAAGG 780
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AATGTTCTTCTGCAGCTTGTGTGAAGCAGAGGTCCTGAAGAACAGTAAGCATTGCAGAGT 840
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 ATGTGACAAGTGTGTTGATGGCTTTGATCACCATTGCAGATGGCTCAACAATTGCATAGG 900
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GAAAAGGAACTACAAAGGTTTCTTCCTTCTAATGACTTCTGCTGTACTCCTTCTTGTAAT 960
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GCAGTGGCTGTCAGGAGCCCTTGTGCTGATTCTCTGCATTGTGGATCGAGGGGAGTTCTC 1020
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 CAGACAGATTGTCTCCAAGTTAGGAAGTAGCTTCTCAACTGTAGTGTTTATAATTGTTGT 1080
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 ----------------------------------------------------------GC 2
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GGCCACCTGTACCGTACTAGCAATGATTGCAACTATACCACTTGCTCAGCTTTTGTGTTT 1140
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 CGGCACGCGCCGCCTCCGCCTTGCCCTCGCGCCGCCGCGTCCACCGCGGCCACGGCCGCC 62
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 CCATATTCTTCTTATCAAGAAGGGAATTAGTACGTATGATTACATCATAGCTTTAAGAGA 1200
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 GCGTCCACCTCCGCCGCTGTCGCGTCGCCGTCAGCGAGGCGAGCCGCCATCTCCGCCTTA 122
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GCAAGAGGAGGATCAACAAGAAGAGACTGCTGGGCACCAAAGTCCGCAGATGTCTATTAT 1260
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 GCCACCGCCG--TCGTCGAGCGCCG-CCGCTGCCAACCGCCACTTCCGGCCGCCGGCGTC 179
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 TAGCTCTGTTACTGGATTTAGCACTGCAAGTTCTTTTGGTCCACTTCATCGTGGTTCATG 1320
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 CCGATCCGGCCGCCTTCCCCTCGCAGCACGCCGTCGCCGTCACCGAGCGCGCCGCCTCCG 239
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GTGCACTCCACCACGATTGTTCCTTGAAGATCAGTTTGATGTCATCCCTCCAGAGATTGG 1380
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 CCTCACGTCGGTGCTGCCGACCGCCG--GGTCCGGCTGCCTTCGACGGTCGACGTCTGGA 297
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 CATG-CTGCAGAACTCTGGGAGTAAGAAAACAAAGGAAGATGAAGGAGCAAGGCGAAGAA 1439
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 TCCGGCCTCCGTGTTGTCGGGGCATGCGGATCTGACCGCCCGCGACCCCTCCTCGCCTCA 357
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 CTGGGACAGTAAAAATCAGTCCTTGGACACTGGCACGCCTTAATGCAGAGGAAGTGTCAA 1499
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 CCCTCTCACTCTCCCTC--TCCCTCTTCCTCTGACCGCCCCCGTCCGGATCCCACTTCGC 415
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 GGGCAGCTGCACAGGCAAAGAAGAAATCCAAAATTCTGAAGCCAATTGCAAGACACGATG 1559
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 TG-CCGCTCTCCCCGCGACGAGCATAGGCACGGCTGCATCTTTCCGGCGGCGGCGACATC 474
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 TTCCAATCGGCCATGACATAAACAT--TGGTGGTAAACTAGTTCCCAAGGCTGACAACAA 1617
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 TTCTCGACGACGACAGCGTCTTCTCGGCGTAGGCAGCGTGGTTCATAGGAGAGCCATGGC 534
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 CAGAAGACCTGATAAAAGGGGACGATTCCCAGCCGAACTTTCCCTCGACCCCCTTACAAG 1677
consensus_7909#2 ------------------------------------------------------------
consensus_7909#1 TTTTGGAGATGAAGTTGCACAACAGTTGTGGGCGGGGAAGACCTGTG---TCCTCGTGGG 591
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 ACTATCTGCAAGTGGTACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAA 1737
consensus_7909#2 ----------------ACTGAAAGCAACGTCAGTGACACAGCAATAGAAACATCTGGGAA 44
consensus_7909#1 TGGAGCTGTCGAGAGAAATTTCACTATTGTGACCAGCAGTAGTTTCAGCGCTTGGAGGAT 651
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 TCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACCGAGTGCTGCGGCATCCAC 1797
consensus_7909#2 TCTAGCCCCATTGCAGTTCGAAGCGAGGAGCGCATTCCAACTGAGTGCTGCGGCATCCAC 104
consensus_7909#1 TCAATCTTCACTGTCGGTACAATCATTTGTTGGGAAATAACTTGTCGGATGATATTCCTT 711
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AAGAAATGCCGCCTCA-TCCCCAGAAAGCAGCT-TCGACTCGCC-TGATCTTCACCCGTT 1854
consensus_7909#2 AAGAAATGCCGCCTCA-TCCCCAGAAAGCAGCT-TCGACTCGCC-TGATCTGCACCCGTT 161
consensus_7909#1 TCCACCTGCCATTTTACTCCTCAGATTACATCTGTTGTCGTGTTATGCATTTGGTGTGTT 771
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 -CCGCCTTTCCTCGTG-CACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAG 1912
consensus_7909#2 -CCGCCTTTCCTCGTG-CACAGCTGATGAGATGCAGGGAGCGATCCCGCATCCAGCTCAG 219
consensus_7909#1 GCTGCAAATCCTGGTGACCCTGGCATTTTCAAGTCGGCAGAGCATCCAAAATTGAACAAG 831
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 AGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGAC 1972
consensus_7909#2 AGTGGTATCAAGTTTTCGAGATCGACAAGCGATGGGTATGAAGCATCAGGAGGCGAGGAC 279
consensus_7909#1 GATGGAAGGCGATCCCAGAAAAATTCAGATCATGGGT-TAAG---TCAAGGAGGAAAAAT 887
consensus_7909#3 ------------------------------------TCGTNCCGTTCGTGGGGAGGAANC 24
* ** * *
consensus_7909#0 AGCGATCGCATCCCGTCGAGAATTGTTCACAG-ATCGTCGAACTGGGCCAACGCCATCTT 2031
consensus_7909#2 AGCGATCGCATCCCGTCGAGAATTGTTCACAG-ATCGTCGAACTGGGCCAACGCCATCTT 338
consensus_7909#1 GTCAA--GTGATGGATTTAATGCTGTTTATAACAGCGAGAAATTGAGC-AACATG--CTT 942
consensus_7909#3 CGTTCCAGTA-TGTAGCTATGGTTCTCTACAC-NCCCCCTGGTGAGGGTTACTCTCCTTC 82
* * * * * * * * ** *
consensus_7909#0 GAGCTCAGGTCAGGGAGGAGGCCCTG--CAGCTGATCCCAACATGCCATCATCTGAAGGG 2089
consensus_7909#2 GAGCTCAGGTCAGGGAGGAGGCCCTG--CAGCTGATCCCAACATGCCATCATCTGAAGGG 396
consensus_7909#1 GAGCTAAA---AGATTCACATTCCTAGCCCACATTTTCTGAAATACTTTGTTTCCCC--- 996
consensus_7909#3 GCGAGGCGATTGGATTAGCTAGCAAG---AACAGAT-CTAGCNCCCTTCCTTTTCTTTTC 138
* * * * * * * * *
consensus_7909#0 TAACTCTACCACCGGCCAGAAGGTCGAGCTAGT-CAGAT-ATGACTTGATTCCAGGCCAT 2147
consensus_7909#2 TAACTCTACCACCGGCCAGAAGGTCGAGCTAGT-CAGAT-ATGACTTGATTCCAGGCCAT 454
consensus_7909#1 TTTTCCTGCCTTTG--CAAAAGATGCTTCCATG-CGGATCATCAGTCATCTGAACAGCAC 1053
consensus_7909#3 ACTTGTTGCCATCTCATTGNGGATTGAGACAGTGCACATTANCCATTCCGCTGTCTGTAG 198
* ** * * * * ** * * *
consensus_7909#0 ATGAGCTGCATGGTGCTGG-CTCCTGGAGAATGCAG---TATACAGCAGAGCAATGATGT 2203
consensus_7909#2 ATGAGCTGCATGGTGCTGG-CTCCTGGAGAATGCAG---TATACAGCAGAGCAATGATGT 510
consensus_7909#1 ATGAGTGAAGAAGGAATGTTCTTCTTCAGCTTGT-G---TGCGAAGCAGAGGTATGAT-- 1107
consensus_7909#3 ATAAGAGAAAT-GTAAGATGTTTTGCGTGTTCGCAGATATGTATTGTAAAACAATGAT-- 255
** ** * * * * * * * * * *****
consensus_7909#0 TGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCA 2263
consensus_7909#2 TGGCAACACATTGGTGGTTAGTTTAGAGTTTAGGAGTAGCTTTGCTGGTGATTGGTGCCA 570
consensus_7909#1 ---CAACTGAT-GTTCAGAAATTTTAATTTTCTAAG--GTTATTGGGGTTATTGGCCACA 1161
consensus_7909#3 --GTGAGGGA--GATTTAGAGAAGGATGTACAAGAAGTATTTCTGCNCCTAGTGATAGTG 311
* * * * * * * * * **
consensus_7909#0 AGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGC 2323
consensus_7909#2 AGTTCGTTTCATGTTAAATTAAAGCATGCGAAACTGCAATTCTGTTGCTTAGTTTTTGGC 630
consensus_7909#1 AGCTCCATT--TGTTGCACTGGT-CTCTTTTAATGATGTGTCAGTACTTTAGATTATAG- 1217
consensus_7909#3 ATACCCATT--TTTGAAGTGTATGCCAGCTTAAT-ATGTTTTGATAGCATTGTTGTCGA- 367
* * ** * * * ** * * * * *
consensus_7909#0 TGTCAGGCATTCTCTTGTGTCCCAGCAA-ATGTGAACCTGAGATTCGTTGCGCTCATTTG 2382
consensus_7909#2 TGTCAGGCATTCTCTTGTGTCCCCAGCA-ATGTGAACCTGAGATTCGTTGCGCTCATTTG 689
consensus_7909#1 TGTGACATGTGCTGGTAAATATAAGCCA-GTAGGAGTATCAGAATAATCAATGTAATTTA 1276
consensus_7909#3 AGCAAGTTGAGAGGTTAAATCTTGACGGTGTGTAAAGTGTCGNGAAAAAAAAAAAAAAAA 427
* * * * * * * *
consensus_7909#0 AGATCAG-TACAGC-ATTCTGTCCG----------------------------------- 2405
consensus_7909#2 AGATCAG-TTTAAA-AAAAAAAAAAACCTCAGGGGGGGGGCCCNGNCCCCATTTCCCCCT 747
consensus_7909#1 GAAACAACTATGGTTAACTAGATTGCATTCATACAAGAATCATGATTGTTATTAGTATCA 1336
consensus_7909#3 AAAAAAAAAAAAA----------------------------------------------- 440
* *
consensus_7909#0 ------------------------------------------------------------
consensus_7909#2 ATAGTGAGTTCGATTTACCGCCGCTCACTGGCCGGCGTGTTACAACGTCCGGACTGGGGA 807
consensus_7909#1 AATATTCATGTAATTCCAAATTATAA---------------------------------- 1362
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 ------------------------------------------------------------
consensus_7909#2 AAACCCGTGCGTTCCCCAACTTATCCCCTTGCACACATCCCCCTTTTCCCACCTTGGCTT 867
consensus_7909#1 ------------------------------------------------------------
consensus_7909#3 ------------------------------------------------------------
consensus_7909#0 -
consensus_7909#2 A 868
consensus_7909#1 -
consensus_7909#3 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||