These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7932#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 981 fasta sequence [GCGATCGCCGGCGCCGCCACTCGCCGCCTCCTCCTGGCGCCCGCCCGCCGCAGGGCCTTCTGGTCCTCGCCCTGGGCGGAGGAATCTCCGCACTCCCCTGGGCCCTCCGCCGACGAGAATAAGAAGAAGAAGCCCTCGTCCCACCACCGCCTGGCCGCGGTCATGGACGCCGTCGCCGACCGCAAGCTCCCTCCCGAGCTCCGCGGCCGCGCCAACGCCGTCAGATCTGAGACTGATATAATCAATGTTGTGGAACAAAGAATATGGCATTCAATGGAAGAAGGGCACTTTGAAAACCTACCTGGGAAGGGAAAACCTTTAAA-CCTCAATTCAAACCCTCATGCTGATCCTG-CAGAAGACACAC-TTTACAGAATACTTTCAAGGAACGGCTGCGCACCCGAATGGGTTGAGCTGAACAAGGAAATTCGAGGCATGATTG-CACGATGGAGATCAGCATTGAGGAAGGCTTGGGCGAACCGCTCTGAGGATGATCGTTCTACCTGGCATGATGATCACAGACTGCTTCAGGAACAAATTCGCCAAATAAATGACAAGGTTTTCCGATACAATCTGATAGTGCCCTTTGGGCGCCAAATGTTTGGTCTTAACTGGGACAAGGAGCTGGACAAATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATAGGCATTATCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAAT-GGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAGCTGAATACTGAAGTTGTGTGCTGTACTATAGTAGAATTTGAGAATGGTTTCAGATTA---AAAAAAAAAAAAAAAA] [+] EMBL AK109222 [GCGATCGCCGGCGCCGCCACTCGCCGCCTCCTCCTGGCGCCCGCCCGCCGCAGGGCCTTCTGGTCCTCGCCCTGGGCGGAGGAATCTCCGCACTCCCCTGGGCCCTCCGCCGACGAGAATAAGAAGAAGAAGCCCTCGTCCCACCACCGCCTGGCCGCGGTCATGGACGCCGTCGCCGACCGCAAGCTCCCTCCCGAGCTCCGCGGCCGCGCCAACGCCGTCAGATCTGAGACTGATATAATCAATGTTGTGGAACAAAGAATATGGCATTCAATGGAAGAAGGGCACTTTGAAAACCTACCTGGGAAGGGAAAACCTTTAAA CCTCAATTCAAACCCTCATGCTGATCCTG CAGAAGACACAC TTTACAGAATACTTTCAAGGAACGGCTGCGCACCCGAATGGGTTGAGCTGAACAAGGAAATTCGAGGCATGATTG CACGATGGAGATCAGCATTGAGGAAGGCTTGGGCGAACCGCTCTGAGGATGATCGTTCTACCTGGCATGATGATCACAGACTGCTTCAGGAACAAATTCGCCAAATAAATGACAAGGTTTTCCGATACAATCTGATAGTGCCCTTTGGGCGCCAAATGTTTGGTCTTAACTGGGACAAGGAGCTGGACAAATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATAGGCATTATCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAAT GGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAGCTGAATACTGAAGTTGTGTGCTGTACTATAGTAGAATTTGAGAATGGTTT ] [+] EMBL AU163692 [ GTCAGATCTGAGACTGATATAATCAATGTTGTGGAACAAAGAATATGGCATTCAATGGAAGAAGGGCACTTTGAAAACCTACCTGGGAAGGGAAAACCTTTAAA CCTCAATTCAAACCCTCATGCTGATCCTG CAGAAGACACAC TTTACAGAATACTTTCAAGGAACGGCTGCGCACCCGAATGGGTTGAGCTGAACAAGGAAATTCGAGGCATGATTG CACGATGGAGATCAGCATTGAGGAAGGCTTGGGCGAACCGCTCTGAGGATGATCGTTCTACCTGGCATGATGATCACAGACTGCTTCAGGAACAAATTCGCCAAATAAATGACAAGGTTTTCCGATACAATCTGATAGTGCCCTTTGGGCGCCAAATGTTTGGTCTTAACTGGGACAAGGAGCTGGACAAATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATAGGCATTATCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAATGGGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAa ] [+] EMBL AU056509 [ AAACCCTACCTGGGAAGGGAAAACCTTNAAACCCTCAATTCAAACCCTCATGCTGATCCTGCCAGAAGACACACTTTTACAGAATACTTTCAAGGACCGGCTGCGCACCCGAATGGGTTGAGCTGAACAAGGAAATTCGAGGCATGATTGNCACGATGGAGATCAGCATTGAGGAAGGCTTGGGCGAACCGCTCTGAGGATGATCGTTCTACCTGGCATGATGATCACAGACTGCTTCAGGAACAAATTCGCCAAATAAATGACAAGGTTTNCCGATACAATCTGATAGTGCCCTTTGGGCGCCAAATGTTTGGTCTTAACTGGGACAAGGAGCTGGACAAATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATNGGCATTATCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAAT GGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAGCTGAATACTGAAGTTGTGTGCTGTACTATAGTAGAATTTGAGAATGGTTTCAGATTA AAAAAAAA ] [+] EMBL C99010 [ TGGNCTTAACTGGGACAAGGAGCTGGACAAATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATAGGCATTANCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAAT GGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAGCTGAATACTGAAGTTGTGTGCTGTACTATAGTAGAATTTGAGAATGGTTTCAGATTATTCAAAAAAAAAAAAAAAA] [+] EMBL CA764418 [ AATTGAAACAGTAAGACGGGAAAAGTGTAGGCTACTGGGATGCAGTTTTATAGGCATTATCCTGTATTTTGTTGTATCCAAGAATACCTTAGAACTCGAGCAGTGGTAAATAGCTTGAATAAAAAAATTAAGAAACTATAGTTATATACGCGGCATTTTTGTAGTCATCTTGCTCTTGGATTTAGATTTTCAGATGTTAGCCTGCAGTGTAGGACATGAAGCAAAGGGGGTCGAAATAAT GGTGTGTAGCATGCAGAACAGCTAATTTTCTGCAGCAGAGCTGAATACTGAAGTTGTGTGCTGTACTATAGTAGAATTTGAGAATGGTTTCAGAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||