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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7958 cluster # 7958       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7958#0 length = 735 sequences # 5  

consensusID : consensus_7958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 735
fasta sequence
                              [GGGAACCTCCATCGCCGCGAGACGGAATGGCGGCGTCGCCCATGGTGATCCGATCTAGGGTTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCCTCCTCGCCGCCTCCTCGCGCCGCGCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGGGCTTGTTGTCCGTGATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCATCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGACAACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAAAAGGCATGGCTTTTTT-GGGTGCTGCTACATTCAGTTTCACATGTCCATGCTATTGGTTATGTTGCCGATGCTCATTTTAGACATGTGCATTTGATTTACATGATTCTGGAGGATCCTTGAGCA-TCCTTGAGCAAATGTGAGCATTTGATAAGAATTTTCTTTCATTTTGATTGCACCAATTAGCTCACTGCTGGAAGTGATATCAAGAATTTTGGTGCTTATGATCTCTACATCGCTGTAAGCTGCTAACTTTTAGCGTTAGGAGGCTTGGTAACAAGTGAGAATGCACTTCAGTATGCTCTTCTTGAAAAAAAA]

[+] EMBL AK121262             [GGGAACCTCCATCGCCGCGAGACGGAATGGCGGCGTCGCCCATGGTGATCCGATCTAGGGTTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCCTCCTCGCCGCCTCCTCGCGCCGCGCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGGGCTTGTTGTCCGTGATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCATCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGACAACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAAAAGGCATGGCTTTTTT GGGTGCTGCTACATTCAGTTTCACATGTCCATGCTATTGGTTATGTTGCCGATGCTCATTTTAGACATGTGCATTTGATTTACATGATTCTGGAGGATCCTTGAGCA TCCTTGAGCAAATGTGAGCATTTGATAAGAATTTTCTTTCATTTTGATTGCACCAATTAGCTCACTGCTGGAAGTGATATCAAGAATTTTGGTGCTTATGATCTCTACATCGCTGTAAGCTGCTAACTTTTAGCGTTAGGAGGCTTGGTAACAAGTGAGAATGCACTTCAGTAT                  ]
[+] EMBL C73237               [                      CGGAATGGCGGCGTCG CCATGGTGATCCGATCTAGGGTTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCCTCCTCGCCGCCTCCTCGCGCCG GCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGGGCTTGTTGTCCGTNATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCATCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGACAACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAAAAGGCATGGCTTTTTTGGGGTGCTG TACATTCAGTTTCANATGTC                                                                                                                                                                                                                                                                               ]
[+] EMBL CB680479             [                         AATGGCGGCGTCGCCCATGGTGATCCGATCTAGGGTTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCCTCCTCGCCGCCTCCTCGCGCCGCGCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGGGCTTGTTGTCCGTGATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCATCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGACAACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAAAAGGCATGGCTTTTTT GGGTGCTGCTACATTCAGTTTCACATGTCCATGCTATTGGTTATGTTGCCGATGCTCATTTTAGACATGTGCATTTGATTTACATGATTCTGGAGGATCCTTGAGC                                                                                                                                                                                                  ]
[+] EMBL C73833               [                                      CCCATGGTGATCCGATCTAGGGTTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCCTCCTCGCCGCCTCCTCGCGCCGCGCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGGGCTTGTTGTCCGTGATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCATCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGACAACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAAa                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU172671             [                                                                                                                                                                                                                                                                                                                        CTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGATGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAAAAGGCATGGCTTTTTT GGGTGCTGCTACATTCAGTTTCACATGTCCATGCTATTGGTTATGTTGCCGATGCTCATTTTAGACATGTGCATTTGATTTACATGATTCTGGAGGATCCTTGAGCANTCCTTGAGCAAATGTGAGCATTTGATAAGAATTTTCTTTCATTTTGATTGCACCAATTAGCTCACTGCTGGAAGTGATATCAAGAATTTTGGTGCTTATGATCTCTACATCGCTGTAAGCTGCTAACTTTTAGCGTTAGGAGGCTTGGTAACAAGTGAGAATGCACTTCAGTATGCTCTTCTTGAAAAAAAA]


>consensus_7958#0 GGGAACCTCCATCGCCGCGAGACGGAATGGCGGCGTCGCCCATGGTGATCCGATCTAGGG TTTTAGCCCGCGCCGTCTCCGCCTCCCTCCGCCGCACCCTCGCCGCTCCTCCCTCTCCCC TCCTCGCCGCCTCCTCGCGCCGCGCCTCCTCCCTCCACAGGTTACCCTCGGTGTGCGGGG GCTTGTTGTCCGTGATGCCGCTCCACAGCGCCGTCGCGTCGGCCAGGCTCCGGTCGGCCA TCTCGCCCGAGTCCCAGAGCTGGGGCATCGTCCCTCAAGGGAATTCTATGCCTTTATGAC AACATACTTTTCCTGCCCTAGCCATTGTAACTTGGTTCAGAAGCTTTTTGAAACTATTGA TGCCTTTTAGCACAAACCATAGAAGAGCTTACAAGAAGCCATAAACTGTTTAACCATTAA AAGGCATGGCTTTTTTGGGTGCTGCTACATTCAGTTTCACATGTCCATGCTATTGGTTAT GTTGCCGATGCTCATTTTAGACATGTGCATTTGATTTACATGATTCTGGAGGATCCTTGA GCATCCTTGAGCAAATGTGAGCATTTGATAAGAATTTTCTTTCATTTTGATTGCACCAAT TAGCTCACTGCTGGAAGTGATATCAAGAATTTTGGTGCTTATGATCTCTACATCGCTGTA AGCTGCTAACTTTTAGCGTTAGGAGGCTTGGTAACAAGTGAGAATGCACTTCAGTATGCT CTTCTTGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)