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Oryza sativa
cluster # 8051 cluster # 8051       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8051#0 length = 1708 sequences # 5  

consensusID : consensus_8051#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1708
fasta sequence
                              [AACGCAACACAAAAGGAACCGCGCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG-GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG-GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGTTCTGCTAGTCACACACTGGGCTTCAGCATGTTTTCC]

[+] EMBL AK061753             [AACGCAACACAAAAGGAACCGCGCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGT                                    ]
[+] EMBL OSC0411              [                      GCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGGTACNGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACG G TGNGACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAG GGCGNTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGACGAACGCGTCCGACCGCTCCGGCGGCGACGAGA AGCCGTGCTCCATGAGNCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATC GCGNGACGTTGATANCGTTCCCCGTCGACCACGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK120179             [                                                  CAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCAAGTTCTGCTAGTCACACACTGGGCTTCAGCATGTTTTCC]
[+] EMBL CB651666             [                                                                   AGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB651667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATGGCGCACGCCGGCCGCACCGCCGTTTCGTTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGTTCTGCTAGTCACACACTG                  ]


>consensus_8051#0 AACGCAACACAAAAGGAACCGCGCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGG CGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGA GCGCGATGACGCGCTGGACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACG CGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTG GGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCGGAGAGCCGTGCTCCATGAGCCG CGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGA CCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGA GTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGC GCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCT CAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAA GAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCT GTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGT CGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCT CCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGT GTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGA GGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTG GGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCA GATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCA CGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCT CGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAA CATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAG CGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCC GCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGT CAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTT ACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGAT CTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGAT AGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTA TTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGTTCTGCTAG TCACACACTGGGCTTCAGCATGTTTTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)