These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1708 fasta sequence [AACGCAACACAAAAGGAACCGCGCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG-GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG-GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGTTCTGCTAGTCACACACTGGGCTTCAGCATGTTTTCC] [+] EMBL AK061753 [AACGCAACACAAAAGGAACCGCGCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGT ] [+] EMBL OSC0411 [ GCGGCGGCACCAAAGCGAGCAGAAGCAGCAGCCGAAGGGTACNGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACG G TGNGACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAG GGCGNTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGACGAACGCGTCCGACCGCTCCGGCGGCGACGAGA AGCCGTGCTCCATGAGNCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATC GCGNGACGTTGATANCGTTCCCCGTCGACCACGg ] [+] EMBL AK120179 [ CAGCCGAAGGCGATCGGAGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGACCCGATGCTGACGGCGAGCCTGTTCGCGGACGCGGTGTGCATCGGCGAGAGGAGCGTGGACGGCGAGGACTGCTTCGTGCTCAAGGTGGAGGCGGAGGCGTCGAGCCTGCGGGCGCGCAACAGCAGCAGCGTGGAGATCATCCGGCACACGGTGTGGGGGTACTTCAGCCAGCGGACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATCGCGCACGCCGGCCGCACCGCCGTCTCGCTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCAAGTTCTGCTAGTCACACACTGGGCTTCAGCATGTTTTCC] [+] EMBL CB651666 [ AGCTCGCGCAACAGGAGAGCTGTCTCCATGAGGAAGCTGTGCCCGAACCTGGAGCGCGATGACGCGCTG GACACGGTGCTCGAGGTGCCCATCCCGGAGGAGATGTTCTCACGCGGCAGCGGCGGTGGCGGCTCCCGCGGCTCCAGGTTCGGCTGCACCAACGTCAAGTCGTGGGTGCGGCCGAACGCGTCCGACCGCTCCGGCGGCGCCG GAGAGCCGTGCTCCATGAGCCGCGGCGAGCTGCAGCTCATGCTCGGCGTCATCGGCGCGCCGCTGATACCGCTCCCCGTCGACCACGCCAAGCAGTCGCCCTGCTCCGTCCTCTGCGAACAGCTCAAGGCCGATCCCATTGAGTCGTCCACGGCCAAGTACATAATACAGCAGTACATCGCGGCGTCGGGCGGGGAGTGGGCGCTGAACAAGGTCACGAACATGTACGCGATGGGGAAGGTGAGGATGACCGCCGCGGAGCTCAACAGCAGCGACGCCGACGGCGGCGGCGGCGGCGGCGGAGGGCACCGCGGCGGGAAGAAGAGCAGCAAGAACGGCGGCGAGGTTGGCGGGTTCGTGCTGTGGCAGAAGAAGCCGGAGCTGTGGTCCCTGGAGCTCGTGGTGTCCGGCTGCAAGATCAGCGCCGGCAGCGACGGCAAGGTCGCCTGGCGCCAGACGCCGTGGCATCAGTCGCACGCCTCCCGCGGTCCGCCGCGCCCTCTCCGCCGATCGCTCCAGGGACTTGAC ] [-] EMBL CB651667 [ GACGGGCCTGCTGGTGCAGCTGGAGGACTCGCACCTGCTGCAGATCAAGTCGAGCGGACACGGCAGCGTCTTCTGGGAGACCACCATGGAGTCGCACCTCCACGACTACCGCGCCGTCGACGGCGTCAACATGGCGCACGCCGGCCGCACCGCCGTTTCGTTCGTCCGCTTCGGGGACAGCAGCGACGGCAACACGCGGACGCGAATGGAGGAGGTGTGGAACATCGAGGAGGTCGACTTCAACATCTGGGGACTCTCCATGGACTGCTTCCTGCCGCCCAGCGACCTCAAGGATAGCAAGGAGGACAAGGACGTCTCCGCCGCCGTCAAGCCCGCGCGGCCGCCGCCGATAAGGATACCGGCGGTGGCCGTCCGCGTCGGGCCATCGCAGGTCGCCGCCGTCAACATGGACGATTCCGACTCGCTCATTGCGAGGTCATGACATACATAGCGGGCAGTGTTACACCGTATGAGTCGTGTGTGTTTACGTGCCTTATCGCCATAAGTTACTTATGGTAAGATCTGTAAATATATTGCAGGTTGAGATATTTTTGTTTTCGGGGAGTGGATTTTACCTCAGATAGATGCTCAGGGGTGAGTAGTAAAGCGAGTAATCCGGGATAGATGTTCTAATTAGCGGTATTGTAATTTGCTTATGACGCCCCTTCACTGTAAAGTTGAAAGAATCTCCAGTTCTGCTAGTCACACACTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||