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Oryza sativa
cluster # 8059 cluster # 8059       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8059#0 length = 2255 sequences # 3  
consensus_8059#1 length = 805 sequences # 1  
consensus_8059#2 length = 322 sequences # 1  

consensusID : consensus_8059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2255
fasta sequence
                              [AATATAGTCGTCGTGTTCCTCCGGCTCGGCGGCTGCATTGACCTTGGGCTCCGCCATGAACTCGATGCTGCTCAGGCCGCTCCCGAGCGCGGGGGCGAGCGGTGGTCGGGGCTCGCCGGGGAGGGGGCGGGTGGTTGGCTCGGCGGTGAGTTTCGGCGGGCGCGGGAGATGGCGGCGCGGGGTGGCGGTGGTGGCGGCGGGGGCGGGGGCGGAGGCGTCGTGGATGGAGGAGGCGGGGGTGGCGGTGCTGGAGGAGGGGGTGAGGCGGAACCCGGCGGTGTCGGACTCGTACCGGCCGCCGGGGATGCCGCGGCCGAACGCGACGGTGCTGGAGGCGCAGGCGCGGGTGTGCACGGGGCCCGAGCAGACGCGCCCGCTCGGGGAGGAGCAGGCCATGCGCGTCCTCGACACCATCCTCCGCTCCGGAATGGGAGAACTCAAAGATGAGCCAGTATCCAGTGCACAACTGGGTGCATTCTTCGCTGGCATGACAATAAGAGCTAATTCCTTTCCAGAAGCCACCCAATGGAGTGAGGGTGAGCGTCGTGCCATGAGCTTATTTTGGCCACGGCTTGTCAATGTTCTTCCCCCCGAGGTGAAATTTATAGCAGATCCGGAAGGAACAATCATGGGAGCAAATGGTTTAACTGGACCTCGGTATGTTGGTCAAAGCACTGCAGAGATGAGACTTGTCAGTGCTTTGAGAGAAGTTCTTGCTGGTGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATTAGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACAGCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGAATTAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGTCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACTACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATTATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGAGAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCATGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACTAGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGCATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGTTCCGGATACCAAACAGCACAGATTTCTCCGAGACTGATGGCATTTCTAGAGAGGGTTTCAGTGTCATTGTGAATGCTCAGGAACTTGGTTTTGAATCTACTGAGACTCCACGAACTGATAGATCAGTCCTGAAAAACTTGGAGTTGGGTTTGGCAGCGCTGAGTGGGGAGAAAGGACCAGCCTATGACAGAATAGTCCTAAATGCTGCCATGGTTGACCACCTCTTAGGCTGCACTGGAGCTGAGGATATCAAGTCCGCACTTGACAGGGCAAGAGAAGCCATTGACAGCGGTAAAGCCCTGAGCAGGCTCATGAATTACATAAAAATCTCGCACAAAGTGTCCTAGCTCGCAAGTGTGCTGGCTGTACAATTTTGGTTTCTGGTGTCGTGGTGGAATACTCTCATCGACTCATACACGAGCACGAGTGCTTTCAAGTTGCTCAGCTAACATGGAGAACATCCCTGACGTGAATAGTCACTTGCAAGGCCTTGTC-AAT-AAATTAACTGAAAGTCTGAAAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTCTTTAGCCATGTTCTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGATGTGTGACCGAATACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGAAACAAAATCTGCAATTCTCGTTGTAATGGGTTACTCCGAAGTCTGAATATGGGTGCTCGTTTGGAATTACTTGTACTGTTTGTTTGAAGTTTGGTTGTGCAAGAGCT]

[+] EMBL AK069931             [AATATAGTCGTCGTGTTCCTCCGGCTCGGCGGCTGCATTGACCTTGGGCTCCGCCATGAACTCGATGCTGCTCAGGCCGCTCCCGAGCGCGGGGGCGAGCGGTGGTCGGGGCTCGCCGGGGAGGGGGCGGGTGGTTGGCTCGGCGGTGAGTTTCGGCGGGCGCGGGAGATGGCGGCGCGGGGTGGCGGTGGTGGCGGCGGGGGCGGGGGCGGAGGCGTCGTGGATGGAGGAGGCGGGGGTGGCGGTGCTGGAGGAGGGGGTGAGGCGGAACCCGGCGGTGTCGGACTCGTACCGGCCGCCGGGGATGCCGCGGCCGAACGCGACGGTGCTGGAGGCGCAGGCGCGGGTGTGCACGGGGCCCGAGCAGACGCGCCCGCTCGGGGAGGAGCAGGCCATGCGCGTCCTCGACACCATCCTCCGCTCCGGAATGGGAGAACTCAAAGATGAGCCAGTATCCAGTGCACAACTGGGTGCATTCTTCGCTGGCATGACAATAAGAGCTAATTCCTTTCCAGAAGCCACCCAATGGAGTGAGGGTGAGCGTCGTGCCATGAGCTTATTTTGGCCACGGCTTGTCAATGTTCTTCCCCCCGAGGTGAAATTTATAGCAGATCCGGAAGGAACAATCATGGGAGCAAATGGTTTAACTGGACCTCGGTATGTTGGTCAAAGCACTGCAGAGATGAGACTTGTCAGTGCTTTGAGAGAAGTTCTTGCTGGTGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATTAGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACAGCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGAATTAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGTCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACTACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATTATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGAGAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCATGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACTAGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGCATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGTTCCGGATACCAAACAGCACAGATTTCTCCGAGACTGATGGCATTTCTAGAGAGGGTTTCAGTGTCATTGTGAATGCTCAGGAACTTGGTTTTGAATCTACTGAGACTCCACGAACTGATAGATCAGTCCTGAAAAACTTGGAGTTGGGTTTGGCAGCGCTGAGTGGGGAGAAAGGACCAGCCTATGACAGAATAGTCCTAAATGCTGCCATGGTTGACCACCTCTTAGGCTGCACTGGAGCTGAGGATATCAAGTCCGCACTTGACAGGGCAAGAGAAGCCATTGACAGCGGTAAAGCCCTGAGCAGGCTCATGAATTACATAAAAATCTCGCACAAAGTGTCCTAGCTCGCAAGTGTGCTGGCTGTACAATTTTGGTTTCTGGTGTCGTGGTGGAATACTCTCATCGACTCATACACGAGCACGAGTGCTTTCAAGTTGCTCAGCTAACATGGAGAACATCCCTGACGTGAATAGTCACTTGCAAGGCCTTGTC AAT AAATTAACTGAAAGTCTGAAAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTCTTTAGCCATGTTCTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGATGTGTGACCGAATACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGAAACAAAATCTGCAATTCTCGTTGTAATG                                                                               ]
[-] EMBL CB673777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTTCTAGAGAGGGCTTCAGTGTCATTGTGAATGCTCAGGAACTTGGTTTTGAATCCACTGAGACTCCACGAACTGATAGATCAGTCCTGAAAAACTTGGAGTTGGGTTTGGCAGCGCTGAGTGGGGAGAAAGGACCAGCCTATGACAGAATAGTCCTAAATGCTGCCATGGTTGACCACCTCTTAGGCTGCACTGGAGCTGAGGATATCAAGTCCGCACTTGACAGGGCAAGAGAAGCCATTGACAGCGGTAAAGCCCTGAGCAGGCTCATGAATTACATAAAAATCTCGCACAAAGTGTCCTAGCTCGCAAGTGTGCTGGCTGTACAATTTTGGTTTCTGGTGTCGTGGTGGAATACTCTCATCGACTCATACACGAGCACGAGTGCTTTCAAGTTGCTCAGCTAACATGGAGAACATCCCTGACGTGAATAGTCACTTGCAAGGCCTTGTC AAT AAATTAACTGAAAGTCTGAAAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTCTTTAGCCATGTTCTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGATGTGTGACCGAATACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGAAACAAAATCTGCAATTCTCGTTGTAATGGGTTACTCCGAAGTCTGAATATGGGTGCTCGTTTGGAATTACTTGTACTGTTTGTTTGAAGTTTGGTTGTGCAAGAGCT]
[-] EMBL D43541               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCCGTGAATAGTCACTTGCAAGGCCTTGTCAAATAAAATTAACTGAAAGTCTGAAAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTCTTTAGCCATGTTCTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGATGTGTGACCGAATACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGAAANAAAATCTGCAATTCTCGTTG                                                                                    ]


>consensus_8059#0 AATATAGTCGTCGTGTTCCTCCGGCTCGGCGGCTGCATTGACCTTGGGCTCCGCCATGAA CTCGATGCTGCTCAGGCCGCTCCCGAGCGCGGGGGCGAGCGGTGGTCGGGGCTCGCCGGG GAGGGGGCGGGTGGTTGGCTCGGCGGTGAGTTTCGGCGGGCGCGGGAGATGGCGGCGCGG GGTGGCGGTGGTGGCGGCGGGGGCGGGGGCGGAGGCGTCGTGGATGGAGGAGGCGGGGGT GGCGGTGCTGGAGGAGGGGGTGAGGCGGAACCCGGCGGTGTCGGACTCGTACCGGCCGCC GGGGATGCCGCGGCCGAACGCGACGGTGCTGGAGGCGCAGGCGCGGGTGTGCACGGGGCC CGAGCAGACGCGCCCGCTCGGGGAGGAGCAGGCCATGCGCGTCCTCGACACCATCCTCCG CTCCGGAATGGGAGAACTCAAAGATGAGCCAGTATCCAGTGCACAACTGGGTGCATTCTT CGCTGGCATGACAATAAGAGCTAATTCCTTTCCAGAAGCCACCCAATGGAGTGAGGGTGA GCGTCGTGCCATGAGCTTATTTTGGCCACGGCTTGTCAATGTTCTTCCCCCCGAGGTGAA ATTTATAGCAGATCCGGAAGGAACAATCATGGGAGCAAATGGTTTAACTGGACCTCGGTA TGTTGGTCAAAGCACTGCAGAGATGAGACTTGTCAGTGCTTTGAGAGAAGTTCTTGCTGG TGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATT AGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACA GCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGA ATTAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACG CTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCT CCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGTCAGATGCTTAA ATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACTACTGGAGGATGA GAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATTATATTCGATTAT TGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGAGAAAGTTCAGCA ATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCATGTGGGCTATGA AGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACTAGTTGTAAAGGG TGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGCATCAAAAGGACT TCCAGTGAACCATTGCTCAGGGTTCCGGATACCAAACAGCACAGATTTCTCCGAGACTGA TGGCATTTCTAGAGAGGGTTTCAGTGTCATTGTGAATGCTCAGGAACTTGGTTTTGAATC TACTGAGACTCCACGAACTGATAGATCAGTCCTGAAAAACTTGGAGTTGGGTTTGGCAGC GCTGAGTGGGGAGAAAGGACCAGCCTATGACAGAATAGTCCTAAATGCTGCCATGGTTGA CCACCTCTTAGGCTGCACTGGAGCTGAGGATATCAAGTCCGCACTTGACAGGGCAAGAGA AGCCATTGACAGCGGTAAAGCCCTGAGCAGGCTCATGAATTACATAAAAATCTCGCACAA AGTGTCCTAGCTCGCAAGTGTGCTGGCTGTACAATTTTGGTTTCTGGTGTCGTGGTGGAA TACTCTCATCGACTCATACACGAGCACGAGTGCTTTCAAGTTGCTCAGCTAACATGGAGA ACATCCCTGACGTGAATAGTCACTTGCAAGGCCTTGTCAATAAATTAACTGAAAGTCTGA AAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTCTTTAGCCATGTT CTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGATGTGTGACCGAA TACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGAAACAAAATCTGC AATTCTCGTTGTAATGGGTTACTCCGAAGTCTGAATATGGGTGCTCGTTTGGAATTACTT GTACTGTTTGTTTGAAGTTTGGTTGTGCAAGAGCT



consensusID : consensus_8059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 805
fasta sequence
                              [AAGTTCTTGCTGGTGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATTAGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACAGCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGTCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACTACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATTATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGAGAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCATGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACTAGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGCATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGNTCCGGATACCAAACAGCACAGATTTCTCCGAGACTGA]

[+] EMBL CB673776             [AAGTTCTTGCTGGTGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATTAGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACAGCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGTCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACTACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATTATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGAGAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCATGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACTAGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGCATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGNTCCGGATACCAAACAGCACAGATTTCTCCGAGACTGA]


>consensus_8059#1 AAGTTCTTGCTGGTGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTC TACCAGTTGAATTAGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCAT TTCTTATTGGACAGCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAG CCTTTGATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATG GTGAGCCCTATGATGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTA GAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAG GCATAACAGAAGGTCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTAC AGGCCAAAACACTACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAG CTTGCCCACCATTATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGC TAGCTACCTCTGAGAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTG CTGGATTTTATCATGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTG TTCATGCTGGACTAGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAA GATCTGCTCATGCATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGNTCCGGATACCAA ACAGCACAGATTTCTCCGAGACTGA



consensusID : consensus_8059#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence
                              [CAGNGNACGCTNTGGGNAATTANCCAGTNCAAATNCAACTATGGTTAATNAAGCACTGCTGGCAGCATTTNTNATTGGACAGCGGATGAATAGGGAGACTGATCGCAAGCTCAAAGGATATTGTNTAGCCTTTAATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTCCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGT]

[+] EMBL OSS2744A             [CAGNGNACGCTNTGGGNAATTANCCAGTNCAAATNCAACTATGGTTAATNAAGCACTGCTGGCAGCATTTNTNATTGGACAGCGGATGAATAGGGAGACTGATCGCAAGCTCAAAGGATATTGTNTAGCCTTTAATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTCCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGGT]


>consensus_8059#2 CAGNGNACGCTNTGGGNAATTANCCAGTNCAAATNCAACTATGGTTAATNAAGCACTGCT GGCAGCATTTNTNATTGGACAGCGGATGAATAGGGAGACTGATCGCAAGCTCAAAGGATA TTGTNTAGCCTTTAATGATGAATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGAC ACACTATGGTGAGCCCTATGATGGAAATACACGCTTTTCCAGGAGTACTCTGTTTGTTGC AGCTGTTAGAGCCTGCTATGGTGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACC CAAGGGAGGCATAACAGAAGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8059#0      AATATAGTCGTCGTGTTCCTCCGGCTCGGCGGCTGCATTGACCTTGGGCTCCGCCATGAA 60
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTCGATGCTGCTCAGGCCGCTCCCGAGCGCGGGGGCGAGCGGTGGTCGGGGCTCGCCGGG 120
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GAGGGGGCGGGTGGTTGGCTCGGCGGTGAGTTTCGGCGGGCGCGGGAGATGGCGGCGCGG 180
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGTGGCGGTGGTGGCGGCGGGGGCGGGGGCGGAGGCGTCGTGGATGGAGGAGGCGGGGGT 240
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGCGGTGCTGGAGGAGGGGGTGAGGCGGAACCCGGCGGTGTCGGACTCGTACCGGCCGCC 300
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGGGATGCCGCGGCCGAACGCGACGGTGCTGGAGGCGCAGGCGCGGGTGTGCACGGGGCC 360
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CGAGCAGACGCGCCCGCTCGGGGAGGAGCAGGCCATGCGCGTCCTCGACACCATCCTCCG 420
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTCCGGAATGGGAGAACTCAAAGATGAGCCAGTATCCAGTGCACAACTGGGTGCATTCTT 480
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CGCTGGCATGACAATAAGAGCTAATTCCTTTCCAGAAGCCACCCAATGGAGTGAGGGTGA 540
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GCGTCGTGCCATGAGCTTATTTTGGCCACGGCTTGTCAATGTTCTTCCCCCCGAGGTGAA 600
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      ATTTATAGCAGATCCGGAAGGAACAATCATGGGAGCAAATGGTTTAACTGGACCTCGGTA 660
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGTTGGTCAAAGCACTGCAGAGATGAGACTTGTCAGTGCTTTGAGAGAAGTTCTTGCTGG 720
consensus_8059#1      -----------------------------------------------AAGTTCTTGCTGG 13
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATT 780
consensus_8059#1      TGGCCATTTGGGTTATGAGGAAGTTCAGGGTGTACTAAAGGATGTTCTACCAGTTGAATT 73
consensus_8059#2      -----------------------------------CAGNGNACGCTNT----GGGNAATT 21
                                                          *  * * * * *    *   ****

consensus_8059#0      AGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACA 840
consensus_8059#1      AGCCAGTGCAAATTCAACTATGGTTAATGAAGCACTGCTGGCAGCATTTCTTATTGGACA 133
consensus_8059#2      ANCCAGTNCAAATNCAACTATGGTTAATNAAGCACTGCTGGCAGCATTTNTNATTGGACA 81
                      * ***** ***** ************** ******************** * ********

consensus_8059#0      GCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGA 900
consensus_8059#1      GCGGATGAATAGGGAGACTGATCGCGAGCTCAAAGGATATTGTCTAGCCTTTGATGATGA 193
consensus_8059#2      GCGGATGAATAGGGAGACTGATCGCAAGCTCAAAGGATATTGTNTAGCCTTTAATGATGA 141
                      ************************* ***************** ******** *******

consensus_8059#0      ATTAG------------TTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGA 948
consensus_8059#1      ATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGA 253
consensus_8059#2      ATTAGGTCCAACTCCAGTTGCTGATGTCAAATCATTGACACACTATGGTGAGCCCTATGA 201
                      *****            *******************************************

consensus_8059#0      TGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGG 1008
consensus_8059#1      TGGAAATACACGCTTTTTCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGG 313
consensus_8059#2      TGGAAATACACGCTTTTCCAGGAGTACTCTGTTTGTTGCAGCTGTTAGAGCCTGCTATGG 261
                      ***************** ******************************************

consensus_8059#0      TGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGG 1068
consensus_8059#1      TGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGG 373
consensus_8059#2      TGAGGCTTGTCTCCTCCATGGTGTTGAGTGGATGCCACCCAAGGGAGGCATAACAGAAGG 321
                      ************************************************************

consensus_8059#0      TCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACT 1128
consensus_8059#1      TCAGATGCTTAAATTCATGGGTGCAAACACACATTTGTCCACATTACAGGCCAAAACACT 433
consensus_8059#2      T----------------------------------------------------------- 322
                      *                                                           

consensus_8059#0      ACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATT 1188
consensus_8059#1      ACTGGAGGATGAGAATACCGGCTTTGCATATTTGGGTCTCCAAGAAGCTTGCCCACCATT 493
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      ATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGA 1248
consensus_8059#1      ATATTCGATTATTGGGCTTAGGGAGCATATTAAGAAACGGCCACCGCTAGCTACCTCTGA 553
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCA 1308
consensus_8059#1      GAAAGTTCAGCAATTTGTGAGAGCGCGAGGAAGAGAATCAATGGTTGCTGGATTTTATCA 613
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACT 1368
consensus_8059#1      TGTGGGCTATGAAGATCCATTGCTTATGCTCATGAGGAGGAGAACTGTTCATGCTGGACT 673
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      AGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGC 1428
consensus_8059#1      AGTTGTAAAGGGTGAGGAGGGTGCGCTTTCTATGACAACCAAAGAAAGATCTGCTCATGC 733
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      ATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGTTCCGGATACCAAACAGCACAGATTT 1488
consensus_8059#1      ATCAAAAGGACTTCCAGTGAACCATTGCTCAGGGNTCCGGATACCAAACAGCACAGATTT 793
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTCCGAGACTGATGGCATTTCTAGAGAGGGTTTCAGTGTCATTGTGAATGCTCAGGAACT 1548
consensus_8059#1      CTCCGAGACTGA------------------------------------------------ 805
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGGTTTTGAATCTACTGAGACTCCACGAACTGATAGATCAGTCCTGAAAAACTTGGAGTT 1608
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GGGTTTGGCAGCGCTGAGTGGGGAGAAAGGACCAGCCTATGACAGAATAGTCCTAAATGC 1668
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGCCATGGTTGACCACCTCTTAGGCTGCACTGGAGCTGAGGATATCAAGTCCGCACTTGA 1728
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CAGGGCAAGAGAAGCCATTGACAGCGGTAAAGCCCTGAGCAGGCTCATGAATTACATAAA 1788
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      AATCTCGCACAAAGTGTCCTAGCTCGCAAGTGTGCTGGCTGTACAATTTTGGTTTCTGGT 1848
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      GTCGTGGTGGAATACTCTCATCGACTCATACACGAGCACGAGTGCTTTCAAGTTGCTCAG 1908
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTAACATGGAGAACATCCCTGACGTGAATAGTCACTTGCAAGGCCTTGTCAATAAATTAA 1968
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      CTGAAAGTCTGAAAAACTGAAAATGTTAGCGATGGGGAATACTTGATTAATCAATCTTTC 2028
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TTTAGCCATGTTCTGAGAGAATCTGGCTGCGTGTACCATATGCAAATTCTGTTCATGAGA 2088
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TGTGTGACCGAATACCTGCATCAAGACACAAGGGATGAGTTATCTTGATTTTGTTCGTGA 2148
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      AACAAAATCTGCAATTCTCGTTGTAATGGGTTACTCCGAAGTCTGAATATGGGTGCTCGT 2208
consensus_8059#1      ------------------------------------------------------------
consensus_8059#2      ------------------------------------------------------------
                                                                                  

consensus_8059#0      TTGGAATTACTTGTACTGTTTGTTTGAAGTTTGGTTGTGCAAGAGCT 2255
consensus_8059#1      -----------------------------------------------
consensus_8059#2      -----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)