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Oryza sativa
cluster # 807 cluster # 807       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_807#0 length = 1703 sequences # 2  

consensusID : consensus_807#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1703
fasta sequence
                              [CGCCGCCACTCCACCACCACTCCGTCGCCGTGGTCGCGCCCGCGCCTACTCCGGTAACCAAACCAACCCGATGGCGATGGAGCTGGAGCGCGCTACCAAGAAGAGGTGCGGCGGCATCGACGGCGACAACCCCGCCGCCGACCTCACCGACGACCTCATCGTGGAGATCCTCTCGCGTCTCCCGGCCAAATCCGTCTGCCGCTTCAAGTGCGTCTCCTGGCGCTGGCGCCGCCTCATCTCCCACCGCGACCACCGCAAGAAGCTCCCCCACATGCTCGCCGGCTTCATCTCCCACTACTCCGTGCCCCTCCACGACGGCATCGTCTTGATTCCCCATTTCGACAGCATCGATGGCGGAGAAGAAGATGAAGAGGAGCACCGCCTTGTTCCTGACCCTTCCTTGTCCTTCTTGCCTGGATACAGGACCATCTTTCCCAAGGATTGCTGCAATGGCCTTCTCCTTTGTTTGTGTTGCAAGAATTCCCCGAGAGATGAATCCGATTACGTGGTCTGCAACCCTGCCACTCAGAGATGGATCATCTTGCCCGAGATCGACCGCGCGGACCCGGTCTCCACCGTCCGTTTGGGCTTCGATCCGGCATTGTCGCCGTACTTCCATGTGTTTGCGATCCTTGAGCATGTGGATGGATGCGTCTCCGGCGTGGAGATTTTCTCGTTGGAGACGGGAGCGTGGAGCCACAGGGAGAATGGTTGGGGTGACGAGGATGACCATACGGTGCATCCCGACGCGAAGTCTGCGTTTGTCGATGGCATGGTGAATTTCATCTCCTACAACTCGGCGATCATAGCGGTTGATACGGAGGGGAAGAAGTGGAAGACTATTCCTTTTCTTGAAGAGATGACCTGTGAATGCATCTCTAATGGGATCCTTGCTTTCATAGGCCAATCCCAAGGGCACTTGTATTACATCAATTTCAGGGATTGGGATTCCTCTATACTGTCAGTCTGGACTCTTGATGATTACTGCAGCTGTGGATGGTCCTTCAAGTACAACATTAGCACTTCCCAGCTTTTCGGATGGACAAATATGAAGCTTGAGCGGGAGTAT-AGCCTGATTGCAATTCACCCAGAATGCAATA-TGATTTTCTATGTTTTCCGGGACGAGGGCCAGAATACTCTGCTATCATATGACATGGACCGTGGGAAAGTTAACTCGATATGCAATATGAGAGATCCCTTTTGGAAAACCTGGGATCCATGTCTTCCGTATGTCCCCGTGTTCATGGAGTCTTTGCCTGATCATGCCTAGATGTGGTGGCATTTAGAAGCAGCTCATGAAGAACAATATTTTGGTCAGCTAAGTTTCGCTGTTAGTGATCAGTGAAGAAAAGGTTGGTCCGCTGGTGGATTTTCTGTAGCTTTCAAAGAAAAAAGAGTTTCTGTCTAGCCAAAAGTTGCCAGAGCTATTGATTACTGAATTGGTATTTTTGCTATTCCATTTACTCTGTTTACCTGTTTACTTATAGAGCAGAGTAAGTGGAGAATATTAAGTTGTGACCTTGTTAAATTCATGGTTTAGCACTAGGGCAAGCCTATTTGATTTTTGTACTACTTCCTTGTGCTTTTCATGCAATCCACCTCTTAGTTTGTAACCCCTAACCAATGTTACTATGTTAGTCAGTCATGGGGATCCTGTTACTTGAATTTACAGAGATTGGTTATCCTTTGAAAAAAAAAAAAAA]

[+] EMBL AK108058             [CGCCGCCACTCCACCACCACTCCGTCGCCGTGGTCGCGCCCGCGCCTACTCCGGTAACCAAACCAACCCGATGGCGATGGAGCTGGAGCGCGCTACCAAGAAGAGGTGCGGCGGCATCGACGGCGACAACCCCGCCGCCGACCTCACCGACGACCTCATCGTGGAGATCCTCTCGCGTCTCCCGGCCAAATCCGTCTGCCGCTTCAAGTGCGTCTCCTGGCGCTGGCGCCGCCTCATCTCCCACCGCGACCACCGCAAGAAGCTCCCCCACATGCTCGCCGGCTTCATCTCCCACTACTCCGTGCCCCTCCACGACGGCATCGTCTTGATTCCCCATTTCGACAGCATCGATGGCGGAGAAGAAGATGAAGAGGAGCACCGCCTTGTTCCTGACCCTTCCTTGTCCTTCTTGCCTGGATACAGGACCATCTTTCCCAAGGATTGCTGCAATGGCCTTCTCCTTTGTTTGTGTTGCAAGAATTCCCCGAGAGATGAATCCGATTACGTGGTCTGCAACCCTGCCACTCAGAGATGGATCATCTTGCCCGAGATCGACCGCGCGGACCCGGTCTCCACCGTCCGTTTGGGCTTCGATCCGGCATTGTCGCCGTACTTCCATGTGTTTGCGATCCTTGAGCATGTGGATGGATGCGTCTCCGGCGTGGAGATTTTCTCGTTGGAGACGGGAGCGTGGAGCCACAGGGAGAATGGTTGGGGTGACGAGGATGACCATACGGTGCATCCCGACGCGAAGTCTGCGTTTGTCGATGGCATGGTGAATTTCATCTCCTACAACTCGGCGATCATAGCGGTTGATACGGAGGGGAAGAAGTGGAAGACTATTCCTTTTCTTGAAGAGATGACCTGTGAATGCATCTCTAATGGGATCCTTGCTTTCATAGGCCAATCCCAAGGGCACTTGTATTACATCAATTTCAGGGATTGGGATTCCTCTATACTGTCAGTCTGGACTCTTGATGATTACTGCAGCTGTGGATGGTCCTTCAAGTACAACATTAGCACTTCCCAGCTTTTCGGATGGACAAATATGAAGCTTGAGCGGGAGTAT AGCCTGATTGCAATTCACCCAGAATGCAATA TGATTTTCTATGTTTTCCGGGACGAGGGCCAGAATACTCTGCTATCATATGACATGGACCGTGGGAAAGTTAACTCGATATGCAATATGAGAGATCCCTTTTGGAAAACCTGGGATCCATGTCTTCCGTATGTCCCCGTGTTCATGGAGTCTTTGCCTGATCATGCCTAGATGTGGTGGCATTTAGAAGCAGCTCATGAAGAACAATATTTTGGTCAGCTAAGTTTCGCTGTTAGTGATCAGTGAAGAAAAGGTTGGTCCGCTGGTGGATTTTCTGTAGCTTTCAAAGAAAAAAGAGTTTCTGTCTAGCCAAAAGTTGCCAGAGCTATTGATTACTGAATTGGTATTTTTGCTATTCCATTTACTCTGTTTACCTGTTTACTTATAGAGCAGAGTAAGTGGAGAATATTAAGTTGTGACCTTGTTAAATTCATGGTTTAGCACTAGGGCAAGCCTATTTGATTTTTGTACTACTTCCTTGTGCTTTTCATGCAATCCACCTCTTAGTT                                                                                               ]
[-] EMBL CA759146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCCCTTCCAAGCTTTTGGGATGAACAAATATTAAGCTT AGCCGGA TATAAACCTGA TGCCATTCACCCAGAATGCAATATTGATTTTTTATG TTTCCGGGGCGAGGGCCAGAATACTGTGCTATCATATTACATGGACCGTGGGAAAGTTAACTCGATATGCAATATTAGAGATCCCTTTTGGAAAGCCTGGGATCCATGTCTTCCGTATGTCCCCGTGTTCATGGAGTCTTTGCCTGATCAAGCCTAGATGCGGTGGCATTTAGAAGCAGCTCATGAAGAACAATATTTTGGTCGGGTAAGTTTCGCTGTTAGTGATCAGTGAAGAAAAGGTTGGTCCGCTGGTGGATTTTCTGTAGCTTTCGAAGGAAAAAGAGTTTCTGTCTAGCCAAAAGTTGCCAGAGCTATTGATTACTGAATTGGTATTTTTGCTATTCCATTTACTCTGTTTACCTGTTTACCTATAGAGCAGAGTAAGTGGAGAATATTAAGTTGTGACCCTGTTAAATTCATGGTTTAGCCCTAGGGCAAGCCTATTTGATTTTTGTACTACTTCCTTGTGCTTTTCATGCAATCCCCCTTTTAGTTTGTAACCCCTAACCAATGTTACTATGTTAGTCAGTCATGGGGATCCTGTTACTTGAATTTACAGAGATTGGTTATCCTTTGAAAAAAAAAAAAAA]


>consensus_807#0 CGCCGCCACTCCACCACCACTCCGTCGCCGTGGTCGCGCCCGCGCCTACTCCGGTAACCA AACCAACCCGATGGCGATGGAGCTGGAGCGCGCTACCAAGAAGAGGTGCGGCGGCATCGA CGGCGACAACCCCGCCGCCGACCTCACCGACGACCTCATCGTGGAGATCCTCTCGCGTCT CCCGGCCAAATCCGTCTGCCGCTTCAAGTGCGTCTCCTGGCGCTGGCGCCGCCTCATCTC CCACCGCGACCACCGCAAGAAGCTCCCCCACATGCTCGCCGGCTTCATCTCCCACTACTC CGTGCCCCTCCACGACGGCATCGTCTTGATTCCCCATTTCGACAGCATCGATGGCGGAGA AGAAGATGAAGAGGAGCACCGCCTTGTTCCTGACCCTTCCTTGTCCTTCTTGCCTGGATA CAGGACCATCTTTCCCAAGGATTGCTGCAATGGCCTTCTCCTTTGTTTGTGTTGCAAGAA TTCCCCGAGAGATGAATCCGATTACGTGGTCTGCAACCCTGCCACTCAGAGATGGATCAT CTTGCCCGAGATCGACCGCGCGGACCCGGTCTCCACCGTCCGTTTGGGCTTCGATCCGGC ATTGTCGCCGTACTTCCATGTGTTTGCGATCCTTGAGCATGTGGATGGATGCGTCTCCGG CGTGGAGATTTTCTCGTTGGAGACGGGAGCGTGGAGCCACAGGGAGAATGGTTGGGGTGA CGAGGATGACCATACGGTGCATCCCGACGCGAAGTCTGCGTTTGTCGATGGCATGGTGAA TTTCATCTCCTACAACTCGGCGATCATAGCGGTTGATACGGAGGGGAAGAAGTGGAAGAC TATTCCTTTTCTTGAAGAGATGACCTGTGAATGCATCTCTAATGGGATCCTTGCTTTCAT AGGCCAATCCCAAGGGCACTTGTATTACATCAATTTCAGGGATTGGGATTCCTCTATACT GTCAGTCTGGACTCTTGATGATTACTGCAGCTGTGGATGGTCCTTCAAGTACAACATTAG CACTTCCCAGCTTTTCGGATGGACAAATATGAAGCTTGAGCGGGAGTATAGCCTGATTGC AATTCACCCAGAATGCAATATGATTTTCTATGTTTTCCGGGACGAGGGCCAGAATACTCT GCTATCATATGACATGGACCGTGGGAAAGTTAACTCGATATGCAATATGAGAGATCCCTT TTGGAAAACCTGGGATCCATGTCTTCCGTATGTCCCCGTGTTCATGGAGTCTTTGCCTGA TCATGCCTAGATGTGGTGGCATTTAGAAGCAGCTCATGAAGAACAATATTTTGGTCAGCT AAGTTTCGCTGTTAGTGATCAGTGAAGAAAAGGTTGGTCCGCTGGTGGATTTTCTGTAGC TTTCAAAGAAAAAAGAGTTTCTGTCTAGCCAAAAGTTGCCAGAGCTATTGATTACTGAAT TGGTATTTTTGCTATTCCATTTACTCTGTTTACCTGTTTACTTATAGAGCAGAGTAAGTG GAGAATATTAAGTTGTGACCTTGTTAAATTCATGGTTTAGCACTAGGGCAAGCCTATTTG ATTTTTGTACTACTTCCTTGTGCTTTTCATGCAATCCACCTCTTAGTTTGTAACCCCTAA CCAATGTTACTATGTTAGTCAGTCATGGGGATCCTGTTACTTGAATTTACAGAGATTGGT TATCCTTTGAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)