These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8106#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1314 fasta sequence [CTCTATATTTTTCGCTGCAACTTTAGGGTTGGCCTGTTTGCCTTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC-AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC-AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATACTGACTGTATGGGAAATAATTTGGTGGGTATTGAGGTAAAACACCTAAATGCTGGCGGAATAATTGAAGTGGCTGTTGTGGAATACCAACAGAATTTGGTACGGCTCCAGGGGTTGGGGTGGCAAGTGGAGTAGACCCAACTGAAGGCAGCACGAAGGAGTTGATTCCCTCTTGGGCATGCCCAGTTTGTGTGGG] [+] EMBL CB632218 [CTCTATATTTTTCGCTGCAACTTTAGGGTTGGCCTGTTTGCCTTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCCAAAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGT ] [+] EMBL CB632219 [ TTTAGGGTTGGCCTGTTTGTATTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAG ] [+] EMBL CB654049 [ ACTGAATGGTCAGTTCCAGCTACATATAATACCACATAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATA ] [-] EMBL AU066127 [ nCCATGC TGATATATACAC NTTGAT AGGCNCCTTTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAANACTTAGATATCCAACAAAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCNCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGA ] [-] EMBL CA999313 [ GGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATACTGACTGTATGGGAAATAATTTGGTGGGTATTGAGGTAAAACACCTAAATGCTGGCGGAATAATTGAAGTGGCTGTTGTGGAATACCAACAGAATTTGGTACGGCTCCAGGGGTTGGGGTGGCAAGTGGAGTAGACCCAACTGAAGGCAGCACGAAGGAGTTGATTCCCTCTTGGGCATGCCCAGTTTGTGTGGG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||