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Oryza sativa
cluster # 8120 cluster # 8120       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8120#0 length = 1632 sequences # 5  

consensusID : consensus_8120#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1632
fasta sequence
                              [AGAGAGCTGGAAATGGATCCCCTTTAAAAGCCGTTGCGTTGGCTCTGCCGCCTTGGCAACAACATCCAATTTCCAAACCAAGAGAGAAGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGG-ACCGAAATGA-GCAA-GAGCAGGAAGGTGA-GAGGCGTCGGA-TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTTCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAATTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACA-CAAATG-CCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCACCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATAAAAAAAAAAGTTTCAGATTTGTGTAAAAAAAAAAA]

[+] EMBL AK069818             [AGAGAGCTGGAAATGGATCCCCTTTAAAAGCCGTTGCGTTGGCTCTGCCGCCTTGGCAACAACATCCAATTTCCAAACCAAGAGAGAAGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCGCGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGAGAACAGGAGG ACCGAAATGA GCAA GAGCAGGAAGGTGA GAGGCGTCGGA TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTTCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAATTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACA CAAATG CCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCAC                                                                                                                                                                        ]
[+] EMBL AU173155             [                                                                                       AGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGG ACCGAAATGA GCAA GAGCAGGAAGGTGA GAGGCGTCGGA TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU062489             [                                                                                            CAGCANTGGCNATGCGGCANGGAGCNCTGCANGGCCCCTCCAATTACTCCCAGGANCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCNACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTNTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTNTGATAGAGAGGCCAGCG ANTTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACNGCCACTCTGCAGTGTGCAGGGAACAGGAGGAACCGAAATGANGCAAGGAGCAGGAAGGTTAGGAGGCGTCGGATTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU092200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATATGCTCTTTGGAAGACACCAAATGCCCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCACCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATAAAAAAAAAA                          ]
[+] EMBL AU173156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTNTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCNCCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATACATGGAATGGTTTCAGATTTGTGTAAAAAAAAAAA]


>consensus_8120#0 AGAGAGCTGGAAATGGATCCCCTTTAAAAGCCGTTGCGTTGGCTCTGCCGCCTTGGCAAC AACATCCAATTTCCAAACCAAGAGAGAAGCAGCAGCGATGGCGATGCGGCAGGGAGCGCT GCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGC CAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCC CGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAG CTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACAT CAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGGAC CGAAATGAGCAAGAGCAGGAAGGTGAGAGGCGTCGGATGGGATGTCTGCGCTCTCGGGAA TGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCA TACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCC TGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTTCTTTAGGCCATGCAACAAATCCTGC AGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATA CCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAG AATTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTT CCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTA CCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACACAAATGCCATCATTCCAGGAGAAGT GACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATC CACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATA CGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGA TGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACC TGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGT TCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTA ACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATC TGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGA TGCTGGAATAAAATCCCGTGCCACCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTG TGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCC TCTTTGTTTTATTTGGATGCAACAATTGGTCAACATAAAAAAAAAAGTTTCAGATTTGTG TAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)