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Oryza sativa
cluster # 8153 cluster # 8153       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8153#0 length = 1784 sequences # 5  

consensusID : consensus_8153#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1784
fasta sequence
                              [CAAACATTTACGGCTGGCTTGCAATCTTAATCTTTTGCAGTGTTCGTCATTCAGGAGGCTCCCGGCCGATCCGGTGGATCGGATCGGAGCGGGAGCACAAACTGCAAATTGCCACGGTCCTTGCACTTGATTTCCGGAGCCAGGAGGATGATTTGCTGCGGCGGCGAGGAGGAGGAGACGTACGCTCCCCGTGCAGCCAGTCGCAGTCGCAGCAGGCGCCCGACACCTGCGACGCAGTACAATGCAGGCCCTCGTAAGCCAAGAGGACCAAATGCACCCAGGAGCGGCGGCCCGCCACCGAAG-GTGCTCTCCATCGACGTGCCAGCCATCTCCATGGGCGAGCTGAACAACATCACCGGACACTTTGGACAGAGTGCCTTGATAGGAGAAGGTTCGTACGGTCGAATCTACAGGGCGGTGCTGACCTCCGGGGAGCCGGTTGCCATAAAAAAGCTTGATCCCAGCGTGTCAAGCGACTCTGAAGCAGACTTCTCTGCTCAGCTGTCAATGGTTTCGAGGCTCAAGAACGAGTATTTCATCCGGCTGATGGGCTACTACCTGGATGCAAACCGAAGAATCCTGGTCTACCAGTTTGCCACGCACGGCTCCCTGCATGACATCCTACACGGGAAGAAGGGCGTGAGGGACGCGGCGCCGGGGCCGGCGCTGAACTGGAGCCAGCGGGTGAAGGTGGCGTACGGCGCCGCGAGAGGGCTCGAGTACCTCCACGAGAAGGCCCAGCCGCCCATCGTCCACCGCGACGTGCGGTCGAGCAACGTTCTCCTCTTCGACGGCTACGAGTCCAAGCTCGCCGACTTCAACCTCACCACCCAGCCTCCCGACGGCGCCGCGCGGTTGCACTCCACCCGCGTCCTCGGAACCTTCGGCTACCACGCGCCCGAGTACGCGATGACGGGACAGCTTAATCAGAAGAGCGATGTGTACAGTTTCGGAGTCATCCTACTGGAGTTACTGACCGGCAGGAAGCCAGTGGACCATACCATGCCGAAGAGACAGCAG-AGTCTTGTAACCTGGGCGACGCCAAGGTTGAGCG-AGGACAAGGTGAGG-CAGTGCGTGGATCCGAAACTCGGGGATGACTATCCTCCAAAAGCAGTTGCCAAGATGGCGGCGGTAGCGGCGTTGTGCGTGCAATACGAGTCAGATTTCCGGCCGAACATGACCATCGTGGTGAAGGCGCTGCAGCCACTTCTCAGCAAGCCAGCCGGAGCAGGAGGGCCCTAGCAGCACATGCATACTAACACCAGCCCATGCATCAAACCAACTTAGCATCCAAAACACATTATGTGCTCTGTTCTTCTTGGATGCTGAGACTTGTTAAACAGCTGGTGATTGTACCATGTACTACTCACAAATCAATCAAACTGCTAAAAGGGTCCAAGGGCTCACAGAGTTTCAGGTCAAAAACTGTGATTCTCCATTGTTCCTTCAGTCCTTACCTTTGTTTAGGTTTCAGATCAGTAGATATTTTTGCAATTTCGCTGTCCCGTTCTGTAGGTACGTAAGGGTCCATTCCACTGCATGACTGCAAGCTACGTCGTGTTCTTATCTTAAGACATTTATTGACATCACACCGATGGGAGACAAACTGACAACCGAAGGACTGTAGAGAAAATAGGAGGCCTCCTTATCAAAGAGAGAAACATTAATAGAGACAATATCTCAGTGTAGCTGCAGTTTGTGATGACTGTGGCTTGATTGTTCGCATTACGCTGTCAGCTGTTATGGGTTAGTAGTTATAACTTTCTCACTATGAACAGATGATA]

[+] EMBL AK111731             [CAAACATTTACGGCTGGCTTGCAATCTTAATCTTTTGCAGTGTTCGTCATTCAGGAGGCTCCCGGCCGATCCGGTGGATCGGATCGGAGCGGGAGCACAAACTGCAAATTGCCACGGTCCTTGCACTTGATTTCCGGAGCCAGGAGGATGATTTGCTGCGGCGGCGAGGAGGAGGAGACGTACGCTCCCCGTGCAGCCAGTCGCAGTCGCAGCAGGCGCCCGACACCTGCGACGCAGTACGATGCAGGCCCTCGTAAGCCAAGAGGACCAAATGCACCCAGGAGCGGCGGCCCGCCACCGAAG GTGCTCTCCATCGACGTGCCAGCCATCTCCATGGGCGAGCTGAACAACATCACCGGACACTTTGGACAGAGTGCCTTGATAGGAGAAGGTTCGTACGGTCGAATCTACAGGGCGGTGCTGACCTCCGGGGAGCCGGTTGCCATAAAAAAGCTTGATCCCAGCGTGTCAAGCGACTCTGAAGCAGACTTCTCTGCTCAGCTGTCAATGGTTTCGAGGCTCAAGAACGAGTATTTCATCCGGCTGATGGGCTACTACCTGGATGCAAACCGAAGAATCCTGGTCTACCAGTTTGCCACGCACGGCTCCCTGCATGACATCCTACACGGGAAGAAGGGCGTGAGGGACGCGGCGCCGGGGCCGGCGCTGAACTGGAGCCAGCGGGTGAAGGTGGCGTACGGCGCCGCGAGAGGGCTCGAGTACCTCCACGAGAAGGCCCAGCCGCCCATCGTCCACCGCGACGTGCGGTCGAGCAACGTTCTCCTCTTCGACGGCTACGAGTCCAAGCTCGCCGACTTCAACCTCACCACCCAGCCTCCCGACGGCGCCGCGCGGTTGCACTCCACCCGCGTCCTCGGAACCTTCGGCTACCACGCGCCCGAGTACGCGATGACGGGACAGCTTAATCAGAAGAGCGATGTGTACAGTTTCGGAGTCATCCTACTGGAGTTACTGACCGGCAGGAAGCCAGTGGACCATACCATGCCGAAGAGACAGCAG AGTCTTGTAACCTGGGCGACGCCAAGGTTGAGCG AGGACAAGGTGAGG CAGTGCGTGGATCCGAAACTCGGGGATGACTATCCTCCAAAAGCAGTTGCCAAGATGGCGGCGGTAGCGGCGTTGTGCGTGCAATACGAGTCAGATTTCCGGCCGAACATGACCATCGTGGTGAAGGCGCTGCAGCCACTTCTCAGCAAGCCAGCCGGAGCAGGAGGGCCCTAGCAGCACATGCATACTAACACCAGCCCATGCATCAAACCAACTTAGCATCCAAAACACATTATGTGCTCTGTTCTTCTTGGATGCTGAGACTTGTTAAACAGCTGGTGATTGTACCATGTACTACTCACAAATCAATCAAACTGCTAAAAGGGTCCAAGGGCTCACAGAGTTTCAGGTCATTGGCTGTGATTCTCCATTGTTCCTTCAGTCCTTACCTTTGTTTAGGTTTCAGATCAGTAGATATTTTTGCAATTTCGCTGTCCCGTTCTGTAGGTACGTAAGGGTCCATTCCACTGCATGACTGCAAGCTACGTCGTGTTCTTATCTTAAGACATTTATTGACATCACACCGATGGGAGACAAACTGACAACCGAAGGACTGTAGAGAAAATAGGAGGCCTCCTTATCAAAGAGAGAAACATTAATAGAGACAATATCTCAGTGTAGCTGCAGTTTGTGATGACTGTGGCTTGATTGTTCGCATTACGCTGTCAGCTGTTATGGGTTAGTAGTTATAACTTTCTCACTATGAACAGATGATA]
[+] EMBL C98899               [CAAACATTTACGGCTGGCTTGCAATCTTAATCTTTTGCAGTGTTCGTCATTCAGGAGGCTCCCGGCCGATCCGGTGGATCGGATCGGAGCGGGAGCACAAACTGCAAATTGCCACGGTCCTTGCACTTGATTTCCGGAGCCAGGAGGATGATTTGCTGCGGCGGCGAGGAGGAGGAGACGTACGCTCCCCGTGCAGCCAGTCGCAGTCGCAGCAGGCGCCCGACACCTGCGACGCAGTACAATGCAGGCCCTCGTAAGCCAAGAGGACCAAATGCACCCAGGAGCGGCGGCCCGCCANCGAAGTGTTCT TCCATCGACGTGCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU069773             [CAAACATTTACGGCTGGCTTGCAATCTTAATCTTTTGCAGTGTTCGTCATTCAGGAGGCTCCCGGCCGATCCGGTGGATCGGATCGGAGCGGGAGCACAAACTGCAAATTGCCACGGTCCTTGCACTTGATTTCCGGAGCCAGGAGGATGATTTGCTGCGGCGGCGAGGAGGAGGAGACGTACGCTCCCCGTGCAGCCAGTCGCAGTCGCAGCAGGCGCCCGACACCTGCGACGCATTACAATGCAGGCCCTCGTAAGCCAAGAGGACCAAATGCACCCAGGAGCGGCGGCCCGCCACCGAA  GTCTTCTCCATCGACGTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C98900               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aTGGACCNTACCNTCCCGAAGAGACAGCAG AGTCTTGTTACCTGGGCGACGCCCAGGTTGACCGAAGGACAAGGTGAGGCCATTGCGTGGATCCGAAACTCGGGGATGACTATCCTCCAAAAGCAGTTGCCAAGATGGCGGCGGTAGCGGCGTTGTGCGTGCAATACGAGTCAGATTTCCGGCCGAACATGACCATCGTGGTGAAGGCGCTGCAGCCACTTCTCAGCAAGCCAGCCGGAGCAGGAGGGCCCTAGCAGCACATGCATACTAACACCAGCCCATGCATCAAACCAACTTAGCATCCAAAACACATTATGTGCTCTGTTCTTCTTGGATGCTGAGACTTGTTAAACAGCTGGTGATTGTACCATGTACTACTCACAAATCAATCAAACTGCTAAAAGGGTCCAAGGGCTCACAGAGTTTCAGGTCAAAAAaaaaa                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU172610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGCCGAAGAGACAGCAGAAGTCTTGTAACCTGGGCGACGCCAAGGTTGAGCG AGGACAAGGTGAGG CAGTGCGTGGATCCGAAACTCGGGGATGACTATCCTCCAAAAGCAGTTGCCAAGATGGCGGCGGTAACGGCGTTGTGCGTGCAATACGAGTCAGATTTCCGGCCGAACATGACCATCGTGGTGAAGGCGCTGCAGCCACTTCTCAGCAAGCCAGCCGGAGCAGGAGGGCCCTAGCAGCACATGCATACTAACACCAGCCCATGCATCAAACCAACTTAGCATCCAAAACACATTATGTGCTCTGTTCTTCTTGGATGCTGAGACTTGTTAAACAGCTGGTGATTGTACCATGTACTACTCACAAATCAATCAAACTGCTAAAAGGGTCCAAGGGCTCACAGAGTTTCAGGTCAAAAA                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_8153#0 CAAACATTTACGGCTGGCTTGCAATCTTAATCTTTTGCAGTGTTCGTCATTCAGGAGGCT CCCGGCCGATCCGGTGGATCGGATCGGAGCGGGAGCACAAACTGCAAATTGCCACGGTCC TTGCACTTGATTTCCGGAGCCAGGAGGATGATTTGCTGCGGCGGCGAGGAGGAGGAGACG TACGCTCCCCGTGCAGCCAGTCGCAGTCGCAGCAGGCGCCCGACACCTGCGACGCAGTAC AATGCAGGCCCTCGTAAGCCAAGAGGACCAAATGCACCCAGGAGCGGCGGCCCGCCACCG AAGGTGCTCTCCATCGACGTGCCAGCCATCTCCATGGGCGAGCTGAACAACATCACCGGA CACTTTGGACAGAGTGCCTTGATAGGAGAAGGTTCGTACGGTCGAATCTACAGGGCGGTG CTGACCTCCGGGGAGCCGGTTGCCATAAAAAAGCTTGATCCCAGCGTGTCAAGCGACTCT GAAGCAGACTTCTCTGCTCAGCTGTCAATGGTTTCGAGGCTCAAGAACGAGTATTTCATC CGGCTGATGGGCTACTACCTGGATGCAAACCGAAGAATCCTGGTCTACCAGTTTGCCACG CACGGCTCCCTGCATGACATCCTACACGGGAAGAAGGGCGTGAGGGACGCGGCGCCGGGG CCGGCGCTGAACTGGAGCCAGCGGGTGAAGGTGGCGTACGGCGCCGCGAGAGGGCTCGAG TACCTCCACGAGAAGGCCCAGCCGCCCATCGTCCACCGCGACGTGCGGTCGAGCAACGTT CTCCTCTTCGACGGCTACGAGTCCAAGCTCGCCGACTTCAACCTCACCACCCAGCCTCCC GACGGCGCCGCGCGGTTGCACTCCACCCGCGTCCTCGGAACCTTCGGCTACCACGCGCCC GAGTACGCGATGACGGGACAGCTTAATCAGAAGAGCGATGTGTACAGTTTCGGAGTCATC CTACTGGAGTTACTGACCGGCAGGAAGCCAGTGGACCATACCATGCCGAAGAGACAGCAG AGTCTTGTAACCTGGGCGACGCCAAGGTTGAGCGAGGACAAGGTGAGGCAGTGCGTGGAT CCGAAACTCGGGGATGACTATCCTCCAAAAGCAGTTGCCAAGATGGCGGCGGTAGCGGCG TTGTGCGTGCAATACGAGTCAGATTTCCGGCCGAACATGACCATCGTGGTGAAGGCGCTG CAGCCACTTCTCAGCAAGCCAGCCGGAGCAGGAGGGCCCTAGCAGCACATGCATACTAAC ACCAGCCCATGCATCAAACCAACTTAGCATCCAAAACACATTATGTGCTCTGTTCTTCTT GGATGCTGAGACTTGTTAAACAGCTGGTGATTGTACCATGTACTACTCACAAATCAATCA AACTGCTAAAAGGGTCCAAGGGCTCACAGAGTTTCAGGTCAAAAACTGTGATTCTCCATT GTTCCTTCAGTCCTTACCTTTGTTTAGGTTTCAGATCAGTAGATATTTTTGCAATTTCGC TGTCCCGTTCTGTAGGTACGTAAGGGTCCATTCCACTGCATGACTGCAAGCTACGTCGTG TTCTTATCTTAAGACATTTATTGACATCACACCGATGGGAGACAAACTGACAACCGAAGG ACTGTAGAGAAAATAGGAGGCCTCCTTATCAAAGAGAGAAACATTAATAGAGACAATATC TCAGTGTAGCTGCAGTTTGTGATGACTGTGGCTTGATTGTTCGCATTACGCTGTCAGCTG TTATGGGTTAGTAGTTATAACTTTCTCACTATGAACAGATGATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)