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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 817 cluster # 817       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_817#0 length = 698 sequences # 2  

consensusID : consensus_817#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence
                              [ATACGCAGTACTAAATTGTCCAATAGAGAGCCAGGTGCCCAGGATCGAGGACAACCAGCACAGTCCCAAACTTATTACAGTAGTAGCTTAAATCCTGGACGAAATTATCCCAATTATAAGATTCAAAAGAGTGGTTCTAAGCAAGCAGTGATCTTTTGGCGCGAACAGCGGCATGGAGTGCAGCTCAGCCGCCGCGCCGGCGACGAGACGATCACCTCGTCAGGTAGGCGACGAGGTCGTCCATGTCCTGGCGCAACGACCCGCCCTCGGCCACGGCGGCGCGGACGGCCTCCCCGATCGCCGCCGCCCTCGCGCGCAGCGCCGCGCCGTCCCCCGACGCCATCGCCCTCTCGATCGCCTCGCGTATCGCGGCCGCCGGCGTGACGTCGTGGCGCTCCTCCCACGGCCGCACGAGGACGCCGGCGCCGAGGTACTTGCACACGAGCTCGGCATCCCACGGCTGGTCGCTGTGCATCGGCCACGCCAGCACGGGCTTCCCGTGGCTCATGCTCTCCACGACGGAGTTCCACCCGCAGTGGCTCATGAACGCCGCCGTCGCGCCGTGCGCCAGGATCTCCAGCTGCGGCGCCCACCCGGTGACCACCACGCCCACGCCCCGGGCGATCTCCTCCCGGAGCCCGCCCGCCGCCTCCGCGAGGCGCGCGCCGTGCACGGCCGCCTCGGCCTCGCGCGTGTCC]

[+] EMBL CB647331             [ATACGCAGTACTAAATTGTCCAATAGAGAGCCAGGTGCCCAGGATCGAGGACAACCAGCACAGTCCCAAACTTATTACAGTAGTAGCTTAAATCCTGGACGAAATTATCCCAATTATAAGATTCAAAAGAGTGGTTCTAAGCAAGCAGTGATCTTTTGGCGCGAACAGCGGCATGGAGTGCAGCTCAGCCGCCGCGCCGGCGACGAGACGATCACCTCGTCAGGTAGGCGACGAGGTCGTCCATGTCCTGGCGCAACGACCCGCCCTCGGCCACGGCGGCGCGGACGGCCTCCCCGATCGCCGCCGCCCTCGCGCGCAGCGCCGCGCCGTCCCCCGACGCCATCGCCCTCTCGATCGCCTCGCGTATCGCGGCCGCCGGCGTGACGTCGTGGCGCTCCTCCCACGGCCGCACGAGGACGCCGGCGCCGAGGTACTTGCACACGAGCTCGGCATCCCACGGCTGGTCGCTGTGCATCGGCCACGCCAGCACGGGCTTCCCGTGGCTCATGCTCTCCACGACGGAGTTCCACCCGCAGTGGCTCATGAACGCCGCCGTCGCGCCGTGCGCCAGGATCTCCAGCTGCGGCGCCCACCCGGTGACCACCACGCCCACGCCCCGGGCGATCTCCTCCCGGAGCCCGCCCGCCGCCTCCGCGAGGCGCGCGCCGTGCACGGCCGCCTCGGCCTCGCGCGTGTCC]
[-] EMBL AU031046             [                                                                                                                                                                                                                                                                                                                                                                                                 GTCGTGGCGCTCCTCCCACGGCCGCACGAGGACGCCGGCGCCGAGGTACTTGCACACGAGCTCGGCATCCCACGGCTGGTCGCTGTGCATCGGCCACGCCAGCACGGGCTTCCCGTGGCTCATGCTCTCCACGACGGAGTTCCACCCGCAGTGGCTCATGAACGCCGCCGTCGCGCCGTGCGCCAGGATCTCCAGCTGCGGCGCCCACCCGGTGACCACCACGCCCACGCCCCGGGCGATCTCCTCCCGGAGCCCGCCCGCCGCCTCCGCGAGGCGCGCGC                                ]


>consensus_817#0 ATACGCAGTACTAAATTGTCCAATAGAGAGCCAGGTGCCCAGGATCGAGGACAACCAGCA CAGTCCCAAACTTATTACAGTAGTAGCTTAAATCCTGGACGAAATTATCCCAATTATAAG ATTCAAAAGAGTGGTTCTAAGCAAGCAGTGATCTTTTGGCGCGAACAGCGGCATGGAGTG CAGCTCAGCCGCCGCGCCGGCGACGAGACGATCACCTCGTCAGGTAGGCGACGAGGTCGT CCATGTCCTGGCGCAACGACCCGCCCTCGGCCACGGCGGCGCGGACGGCCTCCCCGATCG CCGCCGCCCTCGCGCGCAGCGCCGCGCCGTCCCCCGACGCCATCGCCCTCTCGATCGCCT CGCGTATCGCGGCCGCCGGCGTGACGTCGTGGCGCTCCTCCCACGGCCGCACGAGGACGC CGGCGCCGAGGTACTTGCACACGAGCTCGGCATCCCACGGCTGGTCGCTGTGCATCGGCC ACGCCAGCACGGGCTTCCCGTGGCTCATGCTCTCCACGACGGAGTTCCACCCGCAGTGGC TCATGAACGCCGCCGTCGCGCCGTGCGCCAGGATCTCCAGCTGCGGCGCCCACCCGGTGA CCACCACGCCCACGCCCCGGGCGATCTCCTCCCGGAGCCCGCCCGCCGCCTCCGCGAGGC GCGCGCCGTGCACGGCCGCCTCGGCCTCGCGCGTGTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)